BLASTX nr result

ID: Coptis24_contig00001759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001759
         (2389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633414.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   426   e-116
ref|XP_002525869.1| conserved hypothetical protein [Ricinus comm...   424   e-116
ref|XP_004133736.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   421   e-115
ref|XP_002865759.1| EMB1879 [Arabidopsis lyrata subsp. lyrata] g...   421   e-115
ref|XP_003607404.1| hypothetical protein MTR_4g077650 [Medicago ...   421   e-115

>ref|XP_003633414.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera]
            gi|297739449|emb|CBI29631.3| unnamed protein product
            [Vitis vinifera]
          Length = 504

 Score =  426 bits (1096), Expect = e-116
 Identities = 223/307 (72%), Positives = 248/307 (80%), Gaps = 14/307 (4%)
 Frame = -3

Query: 1871 QLLVRETLRISANLASS-------SSHE-------DAQFINSSLRVICCEELDGRRWKYV 1734
            +LL RETLRISA+LASS       SS E       D QF+++SLR+ICCEE++GRRW YV
Sbjct: 22   RLLARETLRISASLASSPAPSAVASSPEARNLGIVDEQFVDASLRLICCEEINGRRWNYV 81

Query: 1733 AETDTSSSSSAKFNNRPSSSSVRAISLQAPQPPIDEFMSFIRSYVVPEGFPDSVSTSYVP 1554
             + +         N +  + S+RA+  Q PQ P+DE MSFIRSYVVPEGFPDSV+ SYVP
Sbjct: 82   VDNEGG-------NGQGRNGSLRAVCSQTPQAPVDELMSFIRSYVVPEGFPDSVTPSYVP 134

Query: 1553 YMKWRALKHFFGGAMGVFTTQALLSSVGLSRDRATSGAVAINWILKDGAGRIGKMLFARQ 1374
            YM WRALKHFFGGAMGVFTTQ LL+SVG+SR+R+  GAVAINWILKDGAGR+GKMLFARQ
Sbjct: 135  YMSWRALKHFFGGAMGVFTTQTLLNSVGVSRNRSAPGAVAINWILKDGAGRVGKMLFARQ 194

Query: 1373 GKKFDYDLKQLRFSGDLLMELGAGVELATALVPHLFLPLXXXXXXXXXXXXVTSTSTRTP 1194
            GKKFDYDLKQLR +GDLLMELGAGVELATA VPHLFLPL            VTSTSTRTP
Sbjct: 195  GKKFDYDLKQLRLAGDLLMELGAGVELATAAVPHLFLPLACAANVAKNVAAVTSTSTRTP 254

Query: 1193 IYKAFAKGENIGDVTAKGECVGNIADLLGTGLSIMISKKNPSLVSTFTLLSCGYILSSYN 1014
            IYKAFAKGENIGDVTAKGECVGNIADLLGTGLSIMISK+NPSLV+TF LLSCGY+LSSY 
Sbjct: 255  IYKAFAKGENIGDVTAKGECVGNIADLLGTGLSIMISKRNPSLVTTFALLSCGYVLSSYQ 314

Query: 1013 EVKSVVL 993
            EVKSVVL
Sbjct: 315  EVKSVVL 321



 Score =  206 bits (525), Expect = 2e-50
 Identities = 101/162 (62%), Positives = 124/162 (76%)
 Frame = -2

Query: 870 QVGNMRESVFTFPWSKNRPIVLGSRFKDAFQEPDSYLTIEPLFNNERYIVTYNPLKGNIY 691
           Q GNM+E++F+FPW +++PIVLGSRFKDAFQ+  SYL+IEPLF  ERY+VTYNP KG +Y
Sbjct: 346 QEGNMKENIFSFPWLEDKPIVLGSRFKDAFQDAGSYLSIEPLFEKERYLVTYNPSKGKVY 405

Query: 690 ALLKDKAKSDDILKAAYHAHVLLHFIXXXXXXXXXXXKHDGNDLLDFIGSLSTHHSLPTT 511
           ALLKD+AKSDDILKAA+HAH+LLHFI           K    D         + H +P+T
Sbjct: 406 ALLKDQAKSDDILKAAFHAHMLLHFIVSSNGSESFPTKQQDYD---------STHLMPST 456

Query: 510 IDIEAHIAESCKIVSSSYGVFKKKASEQGWMMSDSLLNPGRA 385
            D+ AHIAESCK+VS+SYG+FK KA+EQGW MS+SLLNPGRA
Sbjct: 457 ADLAAHIAESCKMVSTSYGLFKSKAAEQGWTMSESLLNPGRA 498


>ref|XP_002525869.1| conserved hypothetical protein [Ricinus communis]
            gi|223534874|gb|EEF36563.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 520

 Score =  424 bits (1091), Expect = e-116
 Identities = 223/318 (70%), Positives = 247/318 (77%), Gaps = 25/318 (7%)
 Frame = -3

Query: 1871 QLLVRETLRISANLASSSSHE-------------------------DAQFINSSLRVICC 1767
            +LLVRETLRISANLAS+   E                         + +F++SSLR+ICC
Sbjct: 28   RLLVRETLRISANLASAPPAESLALLDNNISNDSSNKNKSRKLGFVEEEFVDSSLRLICC 87

Query: 1766 EELDGRRWKYVAETDTSSSSSAKFNNRPSSSSVRAISLQAPQPPIDEFMSFIRSYVVPEG 1587
            EE+DGR+WKYVAE D           R   +S R++SLQ PQ P++E MSFIRSYVVPEG
Sbjct: 88   EEIDGRKWKYVAENDGFG--------RFKKNSFRSVSLQNPQAPVEELMSFIRSYVVPEG 139

Query: 1586 FPDSVSTSYVPYMKWRALKHFFGGAMGVFTTQALLSSVGLSRDRATSGAVAINWILKDGA 1407
            FPDSV+ SYVPYM WRALKHFFGGAMGVFTT+ LLSSVG+S+  A  GAVAINWILKDGA
Sbjct: 140  FPDSVTPSYVPYMTWRALKHFFGGAMGVFTTKTLLSSVGVSKSTAIPGAVAINWILKDGA 199

Query: 1406 GRIGKMLFARQGKKFDYDLKQLRFSGDLLMELGAGVELATALVPHLFLPLXXXXXXXXXX 1227
            GR+GKMLFARQGKKFDYDLKQLRF+GDLLMELGAGVELATA VPHLFLPL          
Sbjct: 200  GRVGKMLFARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAVPHLFLPLACAANVAKNV 259

Query: 1226 XXVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGLSIMISKKNPSLVSTFTL 1047
              VTSTSTRTPIYKAFAKGENIGDVTAKGECVGN+ADLLGTGLSIMISK+NPSLV+TF L
Sbjct: 260  AAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNVADLLGTGLSIMISKRNPSLVTTFAL 319

Query: 1046 LSCGYILSSYNEVKSVVL 993
            LSCGY+ SSY EVKSVVL
Sbjct: 320  LSCGYVFSSYQEVKSVVL 337



 Score =  199 bits (507), Expect = 2e-48
 Identities = 102/162 (62%), Positives = 121/162 (74%)
 Frame = -2

Query: 870 QVGNMRESVFTFPWSKNRPIVLGSRFKDAFQEPDSYLTIEPLFNNERYIVTYNPLKGNIY 691
           Q GN RE++F+FPW K RPIV+GSRFKDAFQ+P ++L IEPLF  ERYIVTYNP K  +Y
Sbjct: 362 QEGNTRENIFSFPWLKERPIVIGSRFKDAFQDPSAFLAIEPLFEKERYIVTYNPTKDKVY 421

Query: 690 ALLKDKAKSDDILKAAYHAHVLLHFIXXXXXXXXXXXKHDGNDLLDFIGSLSTHHSLPTT 511
           ALLKD+AK+DDILKAA+HAHVLLHFI           K   +D  ++I  LS ++     
Sbjct: 422 ALLKDQAKADDILKAAFHAHVLLHFINSSSKSRSSSLKQQQHDHSNYI--LSANY----- 474

Query: 510 IDIEAHIAESCKIVSSSYGVFKKKASEQGWMMSDSLLNPGRA 385
             +EAHIAESCK+VSS YG FK KA+EQGW MSDSLLNPGRA
Sbjct: 475 --LEAHIAESCKMVSSLYGSFKNKAAEQGWRMSDSLLNPGRA 514


>ref|XP_004133736.1| PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis sativus]
            gi|449478104|ref|XP_004155224.1| PREDICTED: UPF0420
            protein C16orf58 homolog [Cucumis sativus]
          Length = 507

 Score =  421 bits (1083), Expect = e-115
 Identities = 219/311 (70%), Positives = 248/311 (79%), Gaps = 18/311 (5%)
 Frame = -3

Query: 1871 QLLVRETLRISANLAS------------SSSHE------DAQFINSSLRVICCEELDGRR 1746
            ++LVRETLR++ANLAS            ++ H       D  F++S+ R+ICCEE+DGRR
Sbjct: 24   RILVRETLRVTANLASPPLDSLPPTTSPAAPHATNLPILDNHFLDSTSRLICCEEIDGRR 83

Query: 1745 WKYVAETDTSSSSSAKFNNRPSSSSVRAISLQAPQPPIDEFMSFIRSYVVPEGFPDSVST 1566
            W YVA+   S         +  ++S+RA+ LQ PQ PIDE MSFIRSYVVPEGFPDSV+ 
Sbjct: 84   WNYVADIQPSG--------KLKNASIRALCLQTPQAPIDEMMSFIRSYVVPEGFPDSVTP 135

Query: 1565 SYVPYMKWRALKHFFGGAMGVFTTQALLSSVGLSRDRATSGAVAINWILKDGAGRIGKML 1386
            SYVPYM WRALKHFFGGAMGVFTTQ LL+SVG++R++AT GA+AINWILKDGAGR+GKML
Sbjct: 136  SYVPYMTWRALKHFFGGAMGVFTTQTLLNSVGVARNKATPGAIAINWILKDGAGRVGKML 195

Query: 1385 FARQGKKFDYDLKQLRFSGDLLMELGAGVELATALVPHLFLPLXXXXXXXXXXXXVTSTS 1206
            FARQGKKFDYDLKQLRF+GDLLMELGAGVELATA  PHLFLPL            VTSTS
Sbjct: 196  FARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAAPHLFLPLACAANVAKNVSAVTSTS 255

Query: 1205 TRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGLSIMISKKNPSLVSTFTLLSCGYIL 1026
            TRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGLSIMISK+NPSLV+TF LLSCGYI 
Sbjct: 256  TRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGLSIMISKRNPSLVTTFGLLSCGYIF 315

Query: 1025 SSYNEVKSVVL 993
            SSY EV+SVVL
Sbjct: 316  SSYQEVRSVVL 326



 Score =  188 bits (477), Expect = 7e-45
 Identities = 94/162 (58%), Positives = 118/162 (72%)
 Frame = -2

Query: 870 QVGNMRESVFTFPWSKNRPIVLGSRFKDAFQEPDSYLTIEPLFNNERYIVTYNPLKGNIY 691
           Q GNM E + +FPW K  PIVLG RFKDAFQ+  S+L IEPLF+ E+Y+VTYN  KG +Y
Sbjct: 351 QKGNMNERILSFPWLKENPIVLGPRFKDAFQDAGSFLAIEPLFDREKYLVTYNQTKGKVY 410

Query: 690 ALLKDKAKSDDILKAAYHAHVLLHFIXXXXXXXXXXXKHDGNDLLDFIGSLSTHHSLPTT 511
           ALLKD+AKSDDI+KAA+HAHVLLHFI           ++     +D   S     S+PTT
Sbjct: 411 ALLKDQAKSDDIIKAAFHAHVLLHFI-----RSSSGAQNSNQKQVDAFSS-----SVPTT 460

Query: 510 IDIEAHIAESCKIVSSSYGVFKKKASEQGWMMSDSLLNPGRA 385
            ++EA IA SCK+VS+SY +FK KASEQGW+M++SLLNPG+A
Sbjct: 461 TNLEAEIAASCKMVSNSYEIFKSKASEQGWVMAESLLNPGKA 502


>ref|XP_002865759.1| EMB1879 [Arabidopsis lyrata subsp. lyrata]
            gi|297311594|gb|EFH42018.1| EMB1879 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 499

 Score =  421 bits (1083), Expect = e-115
 Identities = 221/305 (72%), Positives = 249/305 (81%), Gaps = 9/305 (2%)
 Frame = -3

Query: 1880 DAHQLLVRETLRISANLAS---------SSSHEDAQFINSSLRVICCEELDGRRWKYVAE 1728
            D+ +LL RETLRISA+LAS         S    D+QF++S+LR+ICCEE+DGRR+KYVAE
Sbjct: 21   DSVRLLSRETLRISASLASPPVDDLPPHSPPSPDSQFLHSTLRLICCEEIDGRRFKYVAE 80

Query: 1727 TDTSSSSSAKFNNRPSSSSVRAISLQAPQPPIDEFMSFIRSYVVPEGFPDSVSTSYVPYM 1548
            +D S         R   +SVRAISL++PQ P DE  SF+RSYVVPEGFP SV+ SYVPYM
Sbjct: 81   SDGSG--------RFKKNSVRAISLESPQTPFDEVGSFLRSYVVPEGFPGSVNESYVPYM 132

Query: 1547 KWRALKHFFGGAMGVFTTQALLSSVGLSRDRATSGAVAINWILKDGAGRIGKMLFARQGK 1368
             WRALKHFFGGAMGVFTTQ LL+SVG SR+ + S AVAINWILKDGAGR+GKMLFARQGK
Sbjct: 133  TWRALKHFFGGAMGVFTTQTLLNSVGASRNSSASAAVAINWILKDGAGRVGKMLFARQGK 192

Query: 1367 KFDYDLKQLRFSGDLLMELGAGVELATALVPHLFLPLXXXXXXXXXXXXVTSTSTRTPIY 1188
            KFDYDLKQLRF+GDLLMELGAGVELATA VPHLFLPL            VTSTSTRTPIY
Sbjct: 193  KFDYDLKQLRFAGDLLMELGAGVELATAAVPHLFLPLACAANVVKNVAAVTSTSTRTPIY 252

Query: 1187 KAFAKGENIGDVTAKGECVGNIADLLGTGLSIMISKKNPSLVSTFTLLSCGYILSSYNEV 1008
            KAFAKGENIGDVTAKGECVGNIADL+GTG SI+ISK+NPSLV+TF LLSCGY++SSY EV
Sbjct: 253  KAFAKGENIGDVTAKGECVGNIADLMGTGFSILISKRNPSLVTTFGLLSCGYLMSSYQEV 312

Query: 1007 KSVVL 993
            +SVVL
Sbjct: 313  RSVVL 317



 Score =  182 bits (461), Expect = 5e-43
 Identities = 88/162 (54%), Positives = 119/162 (73%)
 Frame = -2

Query: 870 QVGNMRESVFTFPWSKNRPIVLGSRFKDAFQEPDSYLTIEPLFNNERYIVTYNPLKGNIY 691
           Q GN++E +FTFPW  +RP++LG+RFKDAFQ+P +Y+ ++P F+ ERY+VTY+P KG +Y
Sbjct: 342 QEGNIQEKIFTFPWVDDRPVMLGARFKDAFQDPSTYMAVKPFFDKERYMVTYSPTKGKVY 401

Query: 690 ALLKDKAKSDDILKAAYHAHVLLHFIXXXXXXXXXXXKHDGNDLLDFIGSLSTHHSLPTT 511
           ALLK +A SDDILKAA+HAHVLLHF+             DG   L  +  L    + PT 
Sbjct: 402 ALLKHQANSDDILKAAFHAHVLLHFM---------NQSKDGTPRL--VEQLDPAFA-PTE 449

Query: 510 IDIEAHIAESCKIVSSSYGVFKKKASEQGWMMSDSLLNPGRA 385
            ++E+ IAESC++VS+SY +FK +A+EQGW MS+SLLNPGRA
Sbjct: 450 YELESRIAESCEMVSTSYAIFKSRAAEQGWRMSESLLNPGRA 491


>ref|XP_003607404.1| hypothetical protein MTR_4g077650 [Medicago truncatula]
            gi|355508459|gb|AES89601.1| hypothetical protein
            MTR_4g077650 [Medicago truncatula]
          Length = 490

 Score =  421 bits (1082), Expect = e-115
 Identities = 220/297 (74%), Positives = 246/297 (82%), Gaps = 2/297 (0%)
 Frame = -3

Query: 1877 AHQLLVRETLRISANLASSSSHEDAQFINSSLRVICCEELDGRRWKYVAETDTSSSSSAK 1698
            +  +L+RETLRISA LASS+         S+LR ICCEE+DGRRW YVAET+    +S +
Sbjct: 21   SQDILIRETLRISAQLASSTPPLLDTTTPSTLRFICCEEIDGRRWNYVAETN----ASGQ 76

Query: 1697 FNNRPSSSSVRAISLQAPQPPIDEFMSFIRSYVVPEGFPDSVSTSYVPYMKWRALKHFFG 1518
            F N    +S R++SLQ P+PP+DE MSFI SYVVPEGFP +V+ SYVPYM WRALKHFFG
Sbjct: 77   FKN----NSFRSLSLQTPKPPLDEMMSFITSYVVPEGFPHTVTPSYVPYMTWRALKHFFG 132

Query: 1517 GAMGVFTTQALLSSVGLSRDRAT--SGAVAINWILKDGAGRIGKMLFARQGKKFDYDLKQ 1344
            GAMGVFTTQ LLSSVG+SR+RAT  + AVAINWILKDGAGR+GKMLFARQGKKFDYDLKQ
Sbjct: 133  GAMGVFTTQTLLSSVGVSRNRATPAAAAVAINWILKDGAGRVGKMLFARQGKKFDYDLKQ 192

Query: 1343 LRFSGDLLMELGAGVELATALVPHLFLPLXXXXXXXXXXXXVTSTSTRTPIYKAFAKGEN 1164
            LRF+GDLLMELGAGVELATA +PHLFLPL            VTSTSTRTPIYKAFAKGEN
Sbjct: 193  LRFTGDLLMELGAGVELATAAMPHLFLPLACAANVLKNVGAVTSTSTRTPIYKAFAKGEN 252

Query: 1163 IGDVTAKGECVGNIADLLGTGLSIMISKKNPSLVSTFTLLSCGYILSSYNEVKSVVL 993
            IGDVTAKGECVGNIADLLGTG SIMI+K NPSL++TF+LLSCGYILSSY EVKSVVL
Sbjct: 253  IGDVTAKGECVGNIADLLGTGFSIMIAKSNPSLITTFSLLSCGYILSSYKEVKSVVL 309



 Score =  177 bits (448), Expect = 2e-41
 Identities = 90/160 (56%), Positives = 115/160 (71%)
 Frame = -2

Query: 864 GNMRESVFTFPWSKNRPIVLGSRFKDAFQEPDSYLTIEPLFNNERYIVTYNPLKGNIYAL 685
           GN+ E +F+FPW K+RP+VLGSR KDAFQ P +Y+ IEPLF+ ERYIVTYNP K  ++A+
Sbjct: 336 GNLNEDIFSFPW-KDRPVVLGSRIKDAFQSPSAYVAIEPLFDKERYIVTYNPSKSKVHAV 394

Query: 684 LKDKAKSDDILKAAYHAHVLLHFIXXXXXXXXXXXKHDGNDLLDFIGSLSTHHSLPTTID 505
           LKD+AKSDDILKAA+HAHVL +FI              G+DL   +        + T  D
Sbjct: 395 LKDQAKSDDILKAAFHAHVLSNFI-KSLNESKGSSWKQGDDLNSSV--------MLTAAD 445

Query: 504 IEAHIAESCKIVSSSYGVFKKKASEQGWMMSDSLLNPGRA 385
           +EA IA+SCK+V+++Y +FK KA EQGW MS+SLLNPGRA
Sbjct: 446 LEACIADSCKVVTNAYWLFKNKAHEQGWTMSESLLNPGRA 485


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