BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001742
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278480.1| PREDICTED: F-box protein At5g46170 isoform 1...   380   e-103
emb|CAN73778.1| hypothetical protein VITISV_042179 [Vitis vinifera]   378   e-102
emb|CBI30928.3| unnamed protein product [Vitis vinifera]              376   e-102
ref|XP_002305042.1| f-box family protein [Populus trichocarpa] g...   376   e-102
ref|XP_004163869.1| PREDICTED: F-box protein At5g46170-like, par...   375   e-101

>ref|XP_002278480.1| PREDICTED: F-box protein At5g46170 isoform 1 [Vitis vinifera]
           gi|359483890|ref|XP_003633032.1| PREDICTED: F-box
           protein At5g46170 isoform 2 [Vitis vinifera]
          Length = 399

 Score =  380 bits (975), Expect = e-103
 Identities = 193/236 (81%), Positives = 207/236 (87%), Gaps = 10/236 (4%)
 Frame = +2

Query: 2   VLKNFNEIRSLRIELPSGELGIGDAVLLKWRADFGSSLDNCFILGASSVI---------- 151
           VLKNFNEIR LRIELPSGELGI D VLLKWRADFGS+LDNC ILGA+SVI          
Sbjct: 164 VLKNFNEIRFLRIELPSGELGIEDGVLLKWRADFGSTLDNCVILGAASVICPGPTKGSGV 223

Query: 152 PKENNVTVAVGNSSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHQT 331
               N    V N  DDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEH+T
Sbjct: 224 QDSGNDAFCVSNGGDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKT 283

Query: 332 LNSLVLTDSDGQGMLCMNKDQLEELRVKPLSPSTAAKRTLVPALNMRLWYAPHLELPNGV 511
           L+SLVLTD+DGQG+LCMN+DQLEELRVKPLS S+A+KRTLVPALNMRLWYAPHLELP+G+
Sbjct: 284 LDSLVLTDADGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYAPHLELPDGI 343

Query: 512 VLKGATLVAIRPSEQTPVKKDVSDGSWVSTAFEEPYGTAAKLLVKRRTYCLEMNSF 679
           VLKGATLVAIRPSEQ+  KK+VSDGSWVS AFEEPYGTAAK+LVKRRTYCLEMNSF
Sbjct: 344 VLKGATLVAIRPSEQSVTKKEVSDGSWVSAAFEEPYGTAAKMLVKRRTYCLEMNSF 399


>emb|CAN73778.1| hypothetical protein VITISV_042179 [Vitis vinifera]
          Length = 399

 Score =  378 bits (970), Expect = e-102
 Identities = 194/236 (82%), Positives = 209/236 (88%), Gaps = 10/236 (4%)
 Frame = +2

Query: 2   VLKNFNEIRSLRIELPSGELGIGDAVLLKWRADFGSSLDNCFILGASSVI----PKENNV 169
           VLKNFNEIR LRIELPSGELGI D VLLKWRADFGS+LDNC ILGA+SVI     K + V
Sbjct: 164 VLKNFNEIRFLRIELPSGELGIEDGVLLKWRADFGSTLDNCVILGAASVICPGPTKGSGV 223

Query: 170 ------TVAVGNSSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHQT 331
                    V N  DDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEH+T
Sbjct: 224 QDSGXDAFCVSNGGDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKT 283

Query: 332 LNSLVLTDSDGQGMLCMNKDQLEELRVKPLSPSTAAKRTLVPALNMRLWYAPHLELPNGV 511
           L+SLVLTD+DGQG+LCMN+DQLEELRVKPLS S+A+KRTLVPALNMRLWYAPHLELP+G+
Sbjct: 284 LDSLVLTDADGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYAPHLELPDGI 343

Query: 512 VLKGATLVAIRPSEQTPVKKDVSDGSWVSTAFEEPYGTAAKLLVKRRTYCLEMNSF 679
           VLKGATLVAIRPSEQ+  KK+VSDGSWVS AFEEPYGTAAK+LVKRRTYCLEMNSF
Sbjct: 344 VLKGATLVAIRPSEQSVTKKEVSDGSWVSAAFEEPYGTAAKMLVKRRTYCLEMNSF 399


>emb|CBI30928.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  376 bits (966), Expect = e-102
 Identities = 191/226 (84%), Positives = 206/226 (91%)
 Frame = +2

Query: 2   VLKNFNEIRSLRIELPSGELGIGDAVLLKWRADFGSSLDNCFILGASSVIPKENNVTVAV 181
           VLKNFNEIR LRIELPSGELGI D VLLKWRADFGS+LDNC ILGA+SVI      T   
Sbjct: 175 VLKNFNEIRFLRIELPSGELGIEDGVLLKWRADFGSTLDNCVILGAASVICP--GPTKGS 232

Query: 182 GNSSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHQTLNSLVLTDSD 361
           G   +DNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEH+TL+SLVLTD+D
Sbjct: 233 GVQDNDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDAD 292

Query: 362 GQGMLCMNKDQLEELRVKPLSPSTAAKRTLVPALNMRLWYAPHLELPNGVVLKGATLVAI 541
           GQG+LCMN+DQLEELRVKPLS S+A+KRTLVPALNMRLWYAPHLELP+G+VLKGATLVAI
Sbjct: 293 GQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYAPHLELPDGIVLKGATLVAI 352

Query: 542 RPSEQTPVKKDVSDGSWVSTAFEEPYGTAAKLLVKRRTYCLEMNSF 679
           RPSEQ+  KK+VSDGSWVS AFEEPYGTAAK+LVKRRTYCLEMNSF
Sbjct: 353 RPSEQSVTKKEVSDGSWVSAAFEEPYGTAAKMLVKRRTYCLEMNSF 398


>ref|XP_002305042.1| f-box family protein [Populus trichocarpa]
           gi|222848006|gb|EEE85553.1| f-box family protein
           [Populus trichocarpa]
          Length = 398

 Score =  376 bits (966), Expect = e-102
 Identities = 191/234 (81%), Positives = 205/234 (87%), Gaps = 8/234 (3%)
 Frame = +2

Query: 2   VLKNFNEIRSLRIELPSGELGIGDAVLLKWRADFGSSLDNCFILGASSVIP--------K 157
           VLKNFNEIR LRIELPSGELGI D VLLKWRADFGS+LDNC ILGA+SVI         +
Sbjct: 165 VLKNFNEIRFLRIELPSGELGIDDGVLLKWRADFGSTLDNCVILGAASVITNNKISSAMQ 224

Query: 158 ENNVTVAVGNSSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHQTLN 337
           + N   A     DDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEH+TL+
Sbjct: 225 QENAAAAAAADDDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLD 284

Query: 338 SLVLTDSDGQGMLCMNKDQLEELRVKPLSPSTAAKRTLVPALNMRLWYAPHLELPNGVVL 517
           SLVL D+DGQG+LCMN++QLEELRVKPLS S+A+KRTLVPALNMRLWYAPHLELP+GVVL
Sbjct: 285 SLVLADADGQGVLCMNREQLEELRVKPLSASSASKRTLVPALNMRLWYAPHLELPDGVVL 344

Query: 518 KGATLVAIRPSEQTPVKKDVSDGSWVSTAFEEPYGTAAKLLVKRRTYCLEMNSF 679
           KGATLVAIRPSEQ   KKDVSD SWVST FEEPYGTAAK+LVKRRTYCLEMNSF
Sbjct: 345 KGATLVAIRPSEQAATKKDVSDVSWVSTTFEEPYGTAAKMLVKRRTYCLEMNSF 398


>ref|XP_004163869.1| PREDICTED: F-box protein At5g46170-like, partial [Cucumis sativus]
          Length = 421

 Score =  375 bits (962), Expect = e-101
 Identities = 192/237 (81%), Positives = 209/237 (88%), Gaps = 11/237 (4%)
 Frame = +2

Query: 2   VLKNFNEIRSLRIELPSGELGIGDAVLLKWRADFGSSLDNCFILGASSVIP--------K 157
           VLKNFNEIR LRIELPSGELGI D +LLKWRADFGS+LDNC ILGA+SVI         +
Sbjct: 185 VLKNFNEIRFLRIELPSGELGIDDGILLKWRADFGSTLDNCVILGAASVIHVGSFNKHVQ 244

Query: 158 ENNVT---VAVGNSSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHQ 328
           EN         G ++DD+GSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEH+
Sbjct: 245 ENGTDGFCSGNGPAADDSGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHK 304

Query: 329 TLNSLVLTDSDGQGMLCMNKDQLEELRVKPLSPSTAAKRTLVPALNMRLWYAPHLELPNG 508
           TL++LVLTD+DGQGMLCMNKDQLEELRVKPLS STA+KRTLVPALNMRLWYAPHLELP G
Sbjct: 305 TLDNLVLTDADGQGMLCMNKDQLEELRVKPLSASTASKRTLVPALNMRLWYAPHLELPGG 364

Query: 509 VVLKGATLVAIRPSEQTPVKKDVSDGSWVSTAFEEPYGTAAKLLVKRRTYCLEMNSF 679
           +VLKGATLVAIRPSEQ+  KK+VSDGSW+S AFEEPYGTAAK+LVKRRTYCLEMNSF
Sbjct: 365 IVLKGATLVAIRPSEQSMTKKEVSDGSWLSNAFEEPYGTAAKILVKRRTYCLEMNSF 421