BLASTX nr result

ID: Coptis24_contig00001735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001735
         (1461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263798.1| PREDICTED: KH domain-containing protein At1g...   384   e-104
ref|NP_001055572.1| Os05g0419500 [Oryza sativa Japonica Group] g...   380   e-103
tpg|DAA56469.1| TPA: hypothetical protein ZEAMMB73_282873 [Zea m...   372   e-100
ref|NP_001142049.1| hypothetical protein [Zea mays] gi|194706914...   372   e-100
ref|NP_001045029.1| Os01g0886300 [Oryza sativa Japonica Group] g...   372   e-100

>ref|XP_002263798.1| PREDICTED: KH domain-containing protein At1g09660 [Vitis vinifera]
           gi|297739511|emb|CBI29693.3| unnamed protein product
           [Vitis vinifera]
          Length = 295

 Score =  384 bits (985), Expect = e-104
 Identities = 191/261 (73%), Positives = 213/261 (81%), Gaps = 4/261 (1%)
 Frame = +3

Query: 21  RYLAELLAERQKLAPFMQILPLCTRLLNQEIIRASGLVPNPNFVDHDRIEHESPLRSTVQ 200
           RYLAELLAE+QKL PFMQILP C+RLLNQEI R S + PN  FVD +RIEH+SP RS  Q
Sbjct: 34  RYLAELLAEKQKLGPFMQILPQCSRLLNQEIRRLSAIAPNQGFVDLERIEHDSPFRSLGQ 93

Query: 201 HSNGGLMDLEGWSVMQAEENGFLQRMGAFQTPGMGWHGSPGFQNSPVLKKVIRLDVPVDK 380
           H NGG MDLEGW  MQ EENG L+RM  FQ   +GWH +PG   +PV+K+VIRLDVPVDK
Sbjct: 94  HPNGGPMDLEGWPAMQTEENGPLRRMAPFQASSLGWHRAPGIPTTPVVKRVIRLDVPVDK 153

Query: 381 FPNFNFVGRLLGPRGNSLKRVEATTQCRVYIRGRGSVKDSVKEEKLRDKPGYEHLNEPLH 560
           +PN+NFVGR+LGPRGNSLKRVEA T+CRVYIRG+GSVKD+VKEEKL+DKPGYEHLNEPLH
Sbjct: 154 YPNYNFVGRILGPRGNSLKRVEAMTECRVYIRGQGSVKDAVKEEKLKDKPGYEHLNEPLH 213

Query: 561 VLVEAEFPADLIEPRLNQAIAILEDLLKPVDESLDHYKKQQLRELAMINGTLREE----X 728
           VLVEAEF  D+I  RL QA+AILE+LLKPVDESLD YKKQQLRELAM+NGTLREE     
Sbjct: 214 VLVEAEFSEDIINSRLEQAVAILENLLKPVDESLDQYKKQQLRELAMLNGTLREESPSMS 273

Query: 729 XXXXXXXXXFNTAGMKRAKTG 791
                    FNTAGMKRAKTG
Sbjct: 274 PSMSPSMSPFNTAGMKRAKTG 294


>ref|NP_001055572.1| Os05g0419500 [Oryza sativa Japonica Group]
           gi|53982667|gb|AAV25646.1| unknown protein [Oryza sativa
           Japonica Group] gi|113579123|dbj|BAF17486.1|
           Os05g0419500 [Oryza sativa Japonica Group]
           gi|215704313|dbj|BAG93747.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218196817|gb|EEC79244.1| hypothetical protein
           OsI_19999 [Oryza sativa Indica Group]
           gi|222631627|gb|EEE63759.1| hypothetical protein
           OsJ_18578 [Oryza sativa Japonica Group]
          Length = 291

 Score =  380 bits (976), Expect = e-103
 Identities = 190/261 (72%), Positives = 215/261 (82%), Gaps = 4/261 (1%)
 Frame = +3

Query: 21  RYLAELLAERQKLAPFMQILPLCTRLLNQEIIRASGLVPNPNFVDHDRIEHESPLRSTVQ 200
           RYLAELLAERQKLAPFMQ+LP C RLLNQEI+RAS L PNPNFV+ +R+ H SPLR T  
Sbjct: 37  RYLAELLAERQKLAPFMQVLPFCNRLLNQEILRASSLPPNPNFVEPERVNHGSPLRLTGH 96

Query: 201 HSNGGLMDLEGWSVMQAEENGFLQRMGAFQTPGMGWHGSPGFQNSPVLKKVIRLDVPVDK 380
             NG  MDLEGWS MQ E       MG  Q+P MGW+ +PG   SPV+KKV+R+DVPVDK
Sbjct: 97  PMNGQPMDLEGWSGMQTE-------MGVLQSPSMGWNVAPGVAGSPVVKKVVRIDVPVDK 149

Query: 381 FPNFNFVGRLLGPRGNSLKRVEATTQCRVYIRGRGSVKDSVKEEKLRDKPGYEHLNEPLH 560
           +PN+NFVGRLLGPRGNSLKRVEATTQCRVYIRGRGSVKDSVKE+KLRDKPGYEHLN+PLH
Sbjct: 150 YPNYNFVGRLLGPRGNSLKRVEATTQCRVYIRGRGSVKDSVKEDKLRDKPGYEHLNDPLH 209

Query: 561 VLVEAEFPADLIEPRLNQAIAILEDLLKPVDESLDHYKKQQLRELAMINGTLREE----X 728
           VLVEAEFP+D+++ RLNQA+AILEDLLKPVDES+D+YKKQQLRELA++NGTLREE     
Sbjct: 210 VLVEAEFPSDIVDVRLNQAVAILEDLLKPVDESMDYYKKQQLRELAILNGTLREESPSPH 269

Query: 729 XXXXXXXXXFNTAGMKRAKTG 791
                    FN+ GMKRAKTG
Sbjct: 270 LSPSPSVSPFNSTGMKRAKTG 290


>tpg|DAA56469.1| TPA: hypothetical protein ZEAMMB73_282873 [Zea mays]
          Length = 293

 Score =  372 bits (955), Expect = e-100
 Identities = 187/259 (72%), Positives = 214/259 (82%), Gaps = 2/259 (0%)
 Frame = +3

Query: 21  RYLAELLAERQKLAPFMQILPLCTRLLNQEIIRASGLVPNPNFVDHDRIEHESPLRSTVQ 200
           RYLAELLAERQKLAPF+Q+LP CTRLLNQEI+RAS + PN NFVD +RIEH SPLR    
Sbjct: 37  RYLAELLAERQKLAPFVQVLPFCTRLLNQEILRASSMAPNHNFVDPERIEHGSPLRLPGH 96

Query: 201 HSNGGLMDLEGWSVMQAEENGFLQRMGAFQTPGMGWHGSPGFQNSPVLKKVIRLDVPVDK 380
             NG  MDLEGWS +Q E +   Q MG  Q   MGW+G+P    +PV+KKV+RLDVPVDK
Sbjct: 97  PVNGQPMDLEGWSGIQTEAS---QHMGVLQASSMGWNGAPVLAATPVVKKVMRLDVPVDK 153

Query: 381 FPNFNFVGRLLGPRGNSLKRVEATTQCRVYIRGRGSVKDSVKEEKLRDKPGYEHLNEPLH 560
           +PN+NFVGRLLGPRGNSLKRVEA+TQCRVYIRGRGSVKDSVKE+KLRDKPGYEHLNE LH
Sbjct: 154 YPNYNFVGRLLGPRGNSLKRVEASTQCRVYIRGRGSVKDSVKEDKLRDKPGYEHLNEQLH 213

Query: 561 VLVEAEFPADLIEPRLNQAIAILEDLLKPVDESLDHYKKQQLRELAMINGTLREE--XXX 734
           VLVEAEFPAD+++ RLNQA++ILEDLLKP+DES+D+YKKQQLRELA++NGTLREE     
Sbjct: 214 VLVEAEFPADMVDVRLNQAVSILEDLLKPIDESMDYYKKQQLRELAILNGTLREESPSPH 273

Query: 735 XXXXXXXFNTAGMKRAKTG 791
                  FN+ GMKRAKTG
Sbjct: 274 LSPSVSPFNSTGMKRAKTG 292


>ref|NP_001142049.1| hypothetical protein [Zea mays] gi|194706914|gb|ACF87541.1| unknown
           [Zea mays] gi|414879339|tpg|DAA56470.1| TPA:
           hypothetical protein ZEAMMB73_282873 [Zea mays]
          Length = 285

 Score =  372 bits (955), Expect = e-100
 Identities = 187/259 (72%), Positives = 214/259 (82%), Gaps = 2/259 (0%)
 Frame = +3

Query: 21  RYLAELLAERQKLAPFMQILPLCTRLLNQEIIRASGLVPNPNFVDHDRIEHESPLRSTVQ 200
           RYLAELLAERQKLAPF+Q+LP CTRLLNQEI+RAS + PN NFVD +RIEH SPLR    
Sbjct: 29  RYLAELLAERQKLAPFVQVLPFCTRLLNQEILRASSMAPNHNFVDPERIEHGSPLRLPGH 88

Query: 201 HSNGGLMDLEGWSVMQAEENGFLQRMGAFQTPGMGWHGSPGFQNSPVLKKVIRLDVPVDK 380
             NG  MDLEGWS +Q E +   Q MG  Q   MGW+G+P    +PV+KKV+RLDVPVDK
Sbjct: 89  PVNGQPMDLEGWSGIQTEAS---QHMGVLQASSMGWNGAPVLAATPVVKKVMRLDVPVDK 145

Query: 381 FPNFNFVGRLLGPRGNSLKRVEATTQCRVYIRGRGSVKDSVKEEKLRDKPGYEHLNEPLH 560
           +PN+NFVGRLLGPRGNSLKRVEA+TQCRVYIRGRGSVKDSVKE+KLRDKPGYEHLNE LH
Sbjct: 146 YPNYNFVGRLLGPRGNSLKRVEASTQCRVYIRGRGSVKDSVKEDKLRDKPGYEHLNEQLH 205

Query: 561 VLVEAEFPADLIEPRLNQAIAILEDLLKPVDESLDHYKKQQLRELAMINGTLREE--XXX 734
           VLVEAEFPAD+++ RLNQA++ILEDLLKP+DES+D+YKKQQLRELA++NGTLREE     
Sbjct: 206 VLVEAEFPADMVDVRLNQAVSILEDLLKPIDESMDYYKKQQLRELAILNGTLREESPSPH 265

Query: 735 XXXXXXXFNTAGMKRAKTG 791
                  FN+ GMKRAKTG
Sbjct: 266 LSPSVSPFNSTGMKRAKTG 284


>ref|NP_001045029.1| Os01g0886300 [Oryza sativa Japonica Group]
           gi|56784311|dbj|BAD82237.1| QUAKING isoform 5-like
           [Oryza sativa Japonica Group]
           gi|56785233|dbj|BAD82121.1| QUAKING isoform 5-like
           [Oryza sativa Japonica Group]
           gi|113534560|dbj|BAF06943.1| Os01g0886300 [Oryza sativa
           Japonica Group] gi|125528639|gb|EAY76753.1| hypothetical
           protein OsI_04709 [Oryza sativa Indica Group]
           gi|125572899|gb|EAZ14414.1| hypothetical protein
           OsJ_04338 [Oryza sativa Japonica Group]
           gi|215694363|dbj|BAG89356.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 290

 Score =  372 bits (955), Expect = e-100
 Identities = 189/259 (72%), Positives = 210/259 (81%), Gaps = 2/259 (0%)
 Frame = +3

Query: 21  RYLAELLAERQKLAPFMQILPLCTRLLNQEIIRASGLVPNPNFVDHDRIEHESPLRSTVQ 200
           RYLAELLAERQKLAPF+Q+LP CTRLLNQEI+RAS L PN NFVD +RIEH SPLR    
Sbjct: 37  RYLAELLAERQKLAPFVQVLPFCTRLLNQEILRASSLPPNHNFVDPERIEHGSPLRLPGL 96

Query: 201 HSNGGLMDLEGWSVMQAEENGFLQRMGAFQTPGMGWHGSPGFQNSPVLKKVIRLDVPVDK 380
             NG  MDLEGWS MQ E       M   Q   MGW+G P    +PV+KKV+RLDVPVDK
Sbjct: 97  PVNGQPMDLEGWSGMQTEN------MRVLQASSMGWNGPPAITGTPVVKKVVRLDVPVDK 150

Query: 381 FPNFNFVGRLLGPRGNSLKRVEATTQCRVYIRGRGSVKDSVKEEKLRDKPGYEHLNEPLH 560
           +PN+NFVGRLLGPRGNSLKRVEA+TQCRVYIRGRGSVKDSVKE+KLRDKPGYEHLNEPLH
Sbjct: 151 YPNYNFVGRLLGPRGNSLKRVEASTQCRVYIRGRGSVKDSVKEDKLRDKPGYEHLNEPLH 210

Query: 561 VLVEAEFPADLIEPRLNQAIAILEDLLKPVDESLDHYKKQQLRELAMINGTLREE--XXX 734
           VLVEAEFPAD+I+ RLNQA+ ILEDLLKP+DES+D+YKKQQLRELA++NGTLREE     
Sbjct: 211 VLVEAEFPADIIDTRLNQAVTILEDLLKPIDESMDYYKKQQLRELAILNGTLREESPSPH 270

Query: 735 XXXXXXXFNTAGMKRAKTG 791
                  FN+ GMKRAKTG
Sbjct: 271 LSPSVSPFNSTGMKRAKTG 289


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