BLASTX nr result
ID: Coptis24_contig00001731
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00001731
(2307 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig... 969 0.0
emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera] 959 0.0
emb|CBI38350.3| unnamed protein product [Vitis vinifera] 957 0.0
ref|XP_003632072.1| PREDICTED: probable E3 ubiquitin-protein lig... 938 0.0
ref|XP_003543557.1| PREDICTED: probable E3 ubiquitin-protein lig... 930 0.0
>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
vinifera]
Length = 652
Score = 969 bits (2505), Expect = 0.0
Identities = 460/615 (74%), Positives = 507/615 (82%), Gaps = 5/615 (0%)
Frame = +3
Query: 60 KFSLHLNIFI*VSFLH*RFELIYLIFEDMDSEDDMHDANDVDS-DDFYSGETAMXXXXXX 236
+F++ +IF + L F L + M+SEDDMHDAND +S DDFYSGETA
Sbjct: 42 RFAIGSSIFFLLPLLRPNF----LQKKKMESEDDMHDANDAESLDDFYSGETAADSDDLD 97
Query: 237 XXXXXXXXXXXXXXXXX-HHRQQKNYTVLSEADIRQHQEEDITKISTVLSISRVSASILL 413
HR Q+NYT+L+EADIRQ QE+DIT+ISTVLSI RVSASILL
Sbjct: 98 AADYEFIDNDSDDSDDLTSHRYQQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILL 157
Query: 414 RHYNWSVSKVNDEWFANEEKVRMDVGLLEKPIVIYSNAKEWTCGICFENFPRSRMKATAC 593
RHY WSVSKV+DEWFA+EEKVR VGLLEKP+V + NA+E TCGICFEN+PR R+ + AC
Sbjct: 158 RHYYWSVSKVHDEWFADEEKVRKAVGLLEKPVVQFPNARELTCGICFENYPRDRISSAAC 217
Query: 594 GHPFCSSCWKGYISTSINDGPGCLMLRCPDPSCGAAVGQDMINALVSDEDKEKYNRYLLR 773
GHPFC +CW GY ST+I DGPGCLMLRCPDP+CGAAVGQDMIN L SDEDKEKY+RY LR
Sbjct: 218 GHPFCGTCWAGYTSTAITDGPGCLMLRCPDPTCGAAVGQDMINLLASDEDKEKYSRYFLR 277
Query: 774 SYVEDNRKTKWCPAPGCDYAVDFIFGSASYDVSCNCTYGFCWNCTEEAHRPVDCGTVAKW 953
SY+EDNRKTKWCPAPGCDYAVDFI GS SYDVSC C+Y FCWNCTEEAHRPVDCGTVAKW
Sbjct: 278 SYIEDNRKTKWCPAPGCDYAVDFIVGSGSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKW 337
Query: 954 ILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGSWSDHGE 1133
ILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLG+WSDHGE
Sbjct: 338 ILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGE 397
Query: 1134 RTGGFYACNRYETAKQEGAYDETERRREMAKNSLERYTHYYERWATNQSSRQKAMADLQQ 1313
RTGGFYACNRYETAKQEG YDE E+RR+MAKNSLERYTHYYERWATNQSSRQKA+ADLQQ
Sbjct: 398 RTGGFYACNRYETAKQEGVYDEAEKRRDMAKNSLERYTHYYERWATNQSSRQKALADLQQ 457
Query: 1314 MQAVHIEKLSDKQSTPETQLKFITDAWLQIIECRRVLKWTYAYGYYLPEHEHAKRQFFEY 1493
MQ V+IEKLSDKQ PE+QLKFIT+AWLQI+ECRRVLKWTYAYGYYLPEHEHAKRQFFEY
Sbjct: 458 MQTVNIEKLSDKQCQPESQLKFITEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEY 517
Query: 1494 LQGDAESGLERLHQCAEKDLQVYLNAEGPSQEFNEFRTKLAGLTSVTKNYFENLVRALEN 1673
LQG+AESGLERLHQCAEK+LQ YL+A+GPS++FNEFRTKLAGLTSVT+NYFENLVRALEN
Sbjct: 518 LQGEAESGLERLHQCAEKELQTYLDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALEN 577
Query: 1674 GLSDVDSRGACSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ---EDSGSWSCEHCTYA 1844
GLSDVDSRGACSRT +DSG WSCEHCT+A
Sbjct: 578 GLSDVDSRGACSRTASSKSLGGGSSKARGGRGKGTSSRSSSSSRNLDDSGHWSCEHCTFA 637
Query: 1845 NAKSATICQMCNQQR 1889
N +SATICQ+C Q+R
Sbjct: 638 NVRSATICQICQQRR 652
>emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]
Length = 588
Score = 959 bits (2478), Expect = 0.0
Identities = 451/588 (76%), Positives = 492/588 (83%), Gaps = 6/588 (1%)
Frame = +3
Query: 144 MDSEDDMHDANDVDS-DDFYSGETAMXXXXXXXXXXXXXXXXXXXXXXXHH--RQQKNYT 314
M+SEDDMHDAND +S DDFYSGETA +NYT
Sbjct: 1 MESEDDMHDANDAESLDDFYSGETAADSDDLDAADYEGLFFPILHGFWLPFCGGLMQNYT 60
Query: 315 VLSEADIRQHQEEDITKISTVLSISRVSASILLRHYNWSVSKVNDEWFANEEKVRMDVGL 494
+L+EADIRQ QE+DIT+ISTVLSI RVSASILLRHY WSVSKV+DEWFA+EEKVR VGL
Sbjct: 61 ILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRKAVGL 120
Query: 495 LEKPIVIYSNAKEWTCGICFENFPRSRMKATACGHPFCSSCWKGYISTSINDGPGCLMLR 674
LEKP+V + NA+E TCGICFEN+PR R+ + ACGHPFC +CW GY ST+I DGPGCLMLR
Sbjct: 121 LEKPVVQFPNARELTCGICFENYPRDRISSAACGHPFCGTCWAGYTSTAITDGPGCLMLR 180
Query: 675 CPDPSCGAAVGQDMINALVSDEDKEKYNRYLLRSYVEDNRKTKWCPAPGCDYAVDFIFGS 854
CPDP+CGAAVGQDMIN L SDEDKEKY+RY LRSY+EDNRKTKWCPAPGCDYAVDFI GS
Sbjct: 181 CPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAVDFIVGS 240
Query: 855 ASYDVSCNCTYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRP 1034
SYDVSC C+Y FCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRP
Sbjct: 241 GSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRP 300
Query: 1035 IEKNQGCMHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGAYDETERRR 1214
IEKNQGCMHITCTPPCKFEFCWLCLG+WSDHGERTGGFYACNRYETAKQEG YDE E+RR
Sbjct: 301 IEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEAEKRR 360
Query: 1215 EMAKNSLERYTHYYERWATNQSSRQKAMADLQQMQAVHIEKLSDKQSTPETQLKFITDAW 1394
+MAKNSLERYTHYYERWATNQSSRQKA+ADLQQMQ V+IEKLSDKQ PE+QLKFIT+AW
Sbjct: 361 DMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLKFITEAW 420
Query: 1395 LQIIECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGDAESGLERLHQCAEKDLQVYLNAE 1574
LQI+ECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQG+AESGLERLHQCAEK+LQ YL+A+
Sbjct: 421 LQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQTYLDAD 480
Query: 1575 GPSQEFNEFRTKLAGLTSVTKNYFENLVRALENGLSDVDSRGACSRTXXXXXXXXXXXXX 1754
GPS++FNEFRTKLAGLTSVT+NYFENLVRALENGLSDVDSRGACSRT
Sbjct: 481 GPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTASSKSLGGGSSKA 540
Query: 1755 XXXXXXXXXXXXXXXQ---EDSGSWSCEHCTYANAKSATICQMCNQQR 1889
+DSG WSCEHCT+AN +SATICQ+C Q+R
Sbjct: 541 RGGRGKGTSSRSSSSSRNLDDSGHWSCEHCTFANVRSATICQICQQRR 588
>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 957 bits (2474), Expect = 0.0
Identities = 449/581 (77%), Positives = 489/581 (84%), Gaps = 5/581 (0%)
Frame = +3
Query: 162 MHDANDVDS-DDFYSGETAMXXXXXXXXXXXXXXXXXXXXXXX-HHRQQKNYTVLSEADI 335
MHDAND +S DDFYSGETA HR Q+NYT+L+EADI
Sbjct: 1 MHDANDAESLDDFYSGETAADSDDLDAADYEFIDNDSDDSDDLTSHRYQQNYTILTEADI 60
Query: 336 RQHQEEDITKISTVLSISRVSASILLRHYNWSVSKVNDEWFANEEKVRMDVGLLEKPIVI 515
RQ QE+DIT+ISTVLSI RVSASILLRHY WSVSKV+DEWFA+EEKVR VGLLEKP+V
Sbjct: 61 RQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRKAVGLLEKPVVQ 120
Query: 516 YSNAKEWTCGICFENFPRSRMKATACGHPFCSSCWKGYISTSINDGPGCLMLRCPDPSCG 695
+ NA+E TCGICFEN+PR R+ + ACGHPFC +CW GY ST+I DGPGCLMLRCPDP+CG
Sbjct: 121 FPNARELTCGICFENYPRDRISSAACGHPFCGTCWAGYTSTAITDGPGCLMLRCPDPTCG 180
Query: 696 AAVGQDMINALVSDEDKEKYNRYLLRSYVEDNRKTKWCPAPGCDYAVDFIFGSASYDVSC 875
AAVGQDMIN L SDEDKEKY+RY LRSY+EDNRKTKWCPAPGCDYAVDFI GS SYDVSC
Sbjct: 181 AAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAVDFIVGSGSYDVSC 240
Query: 876 NCTYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGC 1055
C+Y FCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGC
Sbjct: 241 RCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGC 300
Query: 1056 MHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGAYDETERRREMAKNSL 1235
MHITCTPPCKFEFCWLCLG+WSDHGERTGGFYACNRYETAKQEG YDE E+RR+MAKNSL
Sbjct: 301 MHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEAEKRRDMAKNSL 360
Query: 1236 ERYTHYYERWATNQSSRQKAMADLQQMQAVHIEKLSDKQSTPETQLKFITDAWLQIIECR 1415
ERYTHYYERWATNQSSRQKA+ADLQQMQ V+IEKLSDKQ PE+QLKFIT+AWLQI+ECR
Sbjct: 361 ERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLKFITEAWLQIVECR 420
Query: 1416 RVLKWTYAYGYYLPEHEHAKRQFFEYLQGDAESGLERLHQCAEKDLQVYLNAEGPSQEFN 1595
RVLKWTYAYGYYLPEHEHAKRQFFEYLQG+AESGLERLHQCAEK+LQ YL+A+GPS++FN
Sbjct: 421 RVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQTYLDADGPSKDFN 480
Query: 1596 EFRTKLAGLTSVTKNYFENLVRALENGLSDVDSRGACSRTXXXXXXXXXXXXXXXXXXXX 1775
EFRTKLAGLTSVT+NYFENLVRALENGLSDVDSRGACSRT
Sbjct: 481 EFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTASSKSLGGGSSKARGGRGKG 540
Query: 1776 XXXXXXXXQ---EDSGSWSCEHCTYANAKSATICQMCNQQR 1889
+DSG WSCEHCT+AN +SATICQ+C Q+R
Sbjct: 541 TSSRSSSSSRNLDDSGHWSCEHCTFANVRSATICQICQQRR 581
>ref|XP_003632072.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI7-like [Vitis
vinifera] gi|147800085|emb|CAN64272.1| hypothetical
protein VITISV_008933 [Vitis vinifera]
Length = 587
Score = 938 bits (2425), Expect = 0.0
Identities = 441/586 (75%), Positives = 484/586 (82%), Gaps = 4/586 (0%)
Frame = +3
Query: 144 MDSEDDMHDANDVDS-DDFYSGETAMXXXXXXXXXXXXXXXXXXXXXXXH-HRQQKNYTV 317
MDSEDDMHDANDVDS +DFYSG+TA HR Q NYT+
Sbjct: 1 MDSEDDMHDANDVDSLEDFYSGDTAADSDDDNDADYDFDNDSDDDADAIMLHRHQPNYTI 60
Query: 318 LSEADIRQHQEEDITKISTVLSISRVSASILLRHYNWSVSKVNDEWFANEEKVRMDVGLL 497
L E DI QHQE+DI +++ VLSI+ VSASILLRHY+WSVSKVNDEWFA+E +VR VGLL
Sbjct: 61 LKEEDIHQHQEDDIARVAAVLSIASVSASILLRHYHWSVSKVNDEWFADESRVRKAVGLL 120
Query: 498 EKPIVIYSNAKEWTCGICFENFPRSRMKATACGHPFCSSCWKGYISTSINDGPGCLMLRC 677
E+P+V Y NAKE TCGICFE +PR +++ ACGHPFCS+CW+GYISTSINDGPGCLMLRC
Sbjct: 121 EEPLVRYPNAKELTCGICFETYPRDMIQSAACGHPFCSTCWEGYISTSINDGPGCLMLRC 180
Query: 678 PDPSCGAAVGQDMINALVSDEDKEKYNRYLLRSYVEDNRKTKWCPAPGCDYAVDFIFGSA 857
PDPSC AAVGQDMIN L SDED EKY+RYLLRSY+EDNRKTKWCPAPGC+YAV+F+ GS
Sbjct: 181 PDPSCRAAVGQDMINLLASDEDNEKYSRYLLRSYIEDNRKTKWCPAPGCEYAVEFVAGSG 240
Query: 858 SYDVSCNCTYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPI 1037
SYDV+C C+YGFCWNCTEEAHRPVDC TVAKWILKNSAESENMNWILANSKPCPKCKRPI
Sbjct: 241 SYDVACQCSYGFCWNCTEEAHRPVDCSTVAKWILKNSAESENMNWILANSKPCPKCKRPI 300
Query: 1038 EKNQGCMHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGAYDETERRRE 1217
EKNQGCMHITCTPPCKFEFCWLCLG+WSDHGERTGGFYACNRYE AKQEG YDETERRRE
Sbjct: 301 EKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDETERRRE 360
Query: 1218 MAKNSLERYTHYYERWATNQSSRQKAMADLQQMQAVHIEKLSDKQSTPETQLKFITDAWL 1397
MAKNSLERYTHYYERWATNQSSRQKA+ADL QMQ V+IEKLSDKQ PE+QLKFIT+AWL
Sbjct: 361 MAKNSLERYTHYYERWATNQSSRQKALADLHQMQNVNIEKLSDKQCQPESQLKFITEAWL 420
Query: 1398 QIIECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGDAESGLERLHQCAEKDLQVYLNAEG 1577
QI+ECRRVLKWTYAYGYYLPEHE +RQFFEYLQG+AESGLERLHQCAEK+LQ YLN +G
Sbjct: 421 QIVECRRVLKWTYAYGYYLPEHELPRRQFFEYLQGEAESGLERLHQCAEKELQTYLNVDG 480
Query: 1578 PSQEFNEFRTKLAGLTSVTKNYFENLVRALENGLSDVDSRGACSRTXXXXXXXXXXXXXX 1757
PS +FN+FRTKLAGLTSVT+NYFENLVRALENGLSDVDS GACSRT
Sbjct: 481 PSADFNDFRTKLAGLTSVTRNYFENLVRALENGLSDVDSYGACSRTTSSKSMGGTSKARG 540
Query: 1758 XXXXXXXXXXXXXXQ--EDSGSWSCEHCTYANAKSATICQMCNQQR 1889
+ +DS W CEHC ANAKSA CQMC+Q+R
Sbjct: 541 GRGKGTTSRSSSSNKTPDDSSRWYCEHCATANAKSAYTCQMCHQRR 586
>ref|XP_003543557.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI7-like [Glycine
max]
Length = 589
Score = 930 bits (2403), Expect = 0.0
Identities = 434/588 (73%), Positives = 481/588 (81%), Gaps = 6/588 (1%)
Frame = +3
Query: 144 MDSEDDMHDANDVDS--DDFYSGETAMXXXXXXXXXXXXXXXXXXXXXXXHH----RQQK 305
MDSEDDMHDANDV+S DDFYSGET R ++
Sbjct: 1 MDSEDDMHDANDVESLDDDFYSGETEDAPMDYYSDYDDEADDYFDDADDSDRVESRRPEQ 60
Query: 306 NYTVLSEADIRQHQEEDITKISTVLSISRVSASILLRHYNWSVSKVNDEWFANEEKVRMD 485
N+T+L E DIRQ QE+DI +++ VLSI RVSASILLRHYNWSVSKV+D WFA+E++VR
Sbjct: 61 NFTILRELDIRQRQEDDIARVAAVLSIPRVSASILLRHYNWSVSKVHDAWFADEDQVRKT 120
Query: 486 VGLLEKPIVIYSNAKEWTCGICFENFPRSRMKATACGHPFCSSCWKGYISTSINDGPGCL 665
VGLLEKP+ SN +E TCGICFE +PR+R+++ ACGHP+C SCW GYI TSINDGPGCL
Sbjct: 121 VGLLEKPVFQNSNTRELTCGICFEMYPRARVESAACGHPYCYSCWAGYIGTSINDGPGCL 180
Query: 666 MLRCPDPSCGAAVGQDMINALVSDEDKEKYNRYLLRSYVEDNRKTKWCPAPGCDYAVDFI 845
+LRCPDPSCGAAVGQDMIN L SDEDKEKY+RYLLRSY+EDN+KTKWCPAPGC+YAV F
Sbjct: 181 VLRCPDPSCGAAVGQDMINLLASDEDKEKYDRYLLRSYIEDNKKTKWCPAPGCEYAVTFD 240
Query: 846 FGSASYDVSCNCTYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKC 1025
GS +YDVSC C+Y FCWNCTEEAHRPVDCGTV+KWILKNSAESENMNWILANSKPCPKC
Sbjct: 241 AGSGNYDVSCLCSYSFCWNCTEEAHRPVDCGTVSKWILKNSAESENMNWILANSKPCPKC 300
Query: 1026 KRPIEKNQGCMHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGAYDETE 1205
KRPIEKNQGCMH+TCTPPCKFEFCWLCLG+WSDHGERTGGFYACNRYE AKQEG YDETE
Sbjct: 301 KRPIEKNQGCMHMTCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDETE 360
Query: 1206 RRREMAKNSLERYTHYYERWATNQSSRQKAMADLQQMQAVHIEKLSDKQSTPETQLKFIT 1385
RRREMAKNSLERYTHYYERWA+NQSSRQKA+ADL QMQ VHIEKLSD Q PE+QLKFIT
Sbjct: 361 RRREMAKNSLERYTHYYERWASNQSSRQKALADLHQMQTVHIEKLSDTQCQPESQLKFIT 420
Query: 1386 DAWLQIIECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGDAESGLERLHQCAEKDLQVYL 1565
+AWLQI+ECRRVLKWTY+YGYYLPEHEHAK+QFFEYLQG+AESGLERLHQCAEK+LQ++L
Sbjct: 421 EAWLQIVECRRVLKWTYSYGYYLPEHEHAKKQFFEYLQGEAESGLERLHQCAEKELQLFL 480
Query: 1566 NAEGPSQEFNEFRTKLAGLTSVTKNYFENLVRALENGLSDVDSRGACSRTXXXXXXXXXX 1745
NA+GPS+EFN+FRTKLAGLTSVT+NYFENLVRALENGL+DVDS GA S
Sbjct: 481 NADGPSKEFNDFRTKLAGLTSVTRNYFENLVRALENGLADVDSNGAASSKATSSKNAAGS 540
Query: 1746 XXXXXXXXXXXXXXXXXXQEDSGSWSCEHCTYANAKSATICQMCNQQR 1889
D WSCEHCTYAN KSAT CQMCNQQR
Sbjct: 541 SKGRGGRGKATIRTISSRMTDDNHWSCEHCTYANVKSATTCQMCNQQR 588