BLASTX nr result

ID: Coptis24_contig00001726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001726
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517962.1| Peroxisomal membrane protein, putative [Rici...   285   9e-75
ref|XP_003562336.1| PREDICTED: uncharacterized protein LOC100846...   279   4e-73
ref|XP_002317517.1| predicted protein [Populus trichocarpa] gi|2...   278   7e-73
ref|XP_003543349.1| PREDICTED: peroxisomal membrane protein 2-li...   278   9e-73
ref|XP_003539526.1| PREDICTED: peroxisomal membrane protein 2-li...   278   9e-73

>ref|XP_002517962.1| Peroxisomal membrane protein, putative [Ricinus communis]
           gi|223542944|gb|EEF44480.1| Peroxisomal membrane
           protein, putative [Ricinus communis]
          Length = 344

 Score =  285 bits (728), Expect = 9e-75
 Identities = 134/158 (84%), Positives = 145/158 (91%), Gaps = 1/158 (0%)
 Frame = -1

Query: 753 KPLFDFDRTRMFRSGLVGFSLHGSLSHYYYQFCEALFPFQDWWVVPVKVAFDQTAWAALW 574
           KP+F+FDRTRMFRSGLVGF+LHGSLSHYYYQFCEALFPF+DWWVVP KVAFDQT WAA+W
Sbjct: 183 KPIFEFDRTRMFRSGLVGFTLHGSLSHYYYQFCEALFPFEDWWVVPAKVAFDQTVWAAIW 242

Query: 573 NSIYFVVLGLLRFESPASISSELKATFLPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDC 394
           NSIYF+VLG LRFESPA+I SEL ATF PMLTAGWKLWPF+HLITYGVIPVEQRLLWVDC
Sbjct: 243 NSIYFLVLGFLRFESPANIFSELTATFWPMLTAGWKLWPFSHLITYGVIPVEQRLLWVDC 302

Query: 393 VELIWVTILSTYSNEKSEAR-SEALLETNSKTQSISSE 283
           VELIWVTILSTYSNEKSEAR SEA +E  SK+ S  +E
Sbjct: 303 VELIWVTILSTYSNEKSEARTSEATIEATSKSSSNHTE 340


>ref|XP_003562336.1| PREDICTED: uncharacterized protein LOC100846887 [Brachypodium
           distachyon]
          Length = 359

 Score =  279 bits (714), Expect = 4e-73
 Identities = 130/154 (84%), Positives = 142/154 (92%), Gaps = 1/154 (0%)
 Frame = -1

Query: 753 KPLFDFDRTRMFRSGLVGFSLHGSLSHYYYQFCEALFPFQDWWVVPVKVAFDQTAWAALW 574
           KP+F+FDRTRMFRSGLVGF+LHGSLSHYYY FCE+LFPF+DWW VPVKVAFDQTAW+ALW
Sbjct: 205 KPIFEFDRTRMFRSGLVGFTLHGSLSHYYYHFCESLFPFKDWWAVPVKVAFDQTAWSALW 264

Query: 573 NSIYFVVLGLLRFESPASISSELKATFLPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDC 394
           NSIYFVVLG LRFESP +I SELK+TF PMLTAGWKLWPFAHLITYGV+PVEQRLLWVDC
Sbjct: 265 NSIYFVVLGFLRFESPVTIFSELKSTFFPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDC 324

Query: 393 VELIWVTILSTYSNEKSEAR-SEALLETNSKTQS 295
           VELIWVTILSTYSNEKSEAR S+A   T+S+  S
Sbjct: 325 VELIWVTILSTYSNEKSEARISDASTSTDSQDNS 358


>ref|XP_002317517.1| predicted protein [Populus trichocarpa] gi|222860582|gb|EEE98129.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  278 bits (712), Expect = 7e-73
 Identities = 132/154 (85%), Positives = 140/154 (90%), Gaps = 1/154 (0%)
 Frame = -1

Query: 753 KPLFDFDRTRMFRSGLVGFSLHGSLSHYYYQFCEALFPFQDWWVVPVKVAFDQTAWAALW 574
           KP+F+FDRTRMFRSG+VGF+LHGSLSHYYYQFCE LFPFQDWWVVPVKVAFDQT WAA W
Sbjct: 87  KPIFEFDRTRMFRSGVVGFTLHGSLSHYYYQFCEELFPFQDWWVVPVKVAFDQTLWAAAW 146

Query: 573 NSIYFVVLGLLRFESPASISSELKATFLPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDC 394
           NSIYF VLG LR ESPASI SEL ATF PMLTAGWKLWPFAHLITYGV+PVEQRLLWVDC
Sbjct: 147 NSIYFTVLGFLRLESPASIFSELTATFWPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDC 206

Query: 393 VELIWVTILSTYSNEKSEAR-SEALLETNSKTQS 295
           VELIWVTILSTYSNEKSEAR SEA +E +S + S
Sbjct: 207 VELIWVTILSTYSNEKSEARISEATVEASSSSLS 240


>ref|XP_003543349.1| PREDICTED: peroxisomal membrane protein 2-like [Glycine max]
          Length = 322

 Score =  278 bits (711), Expect = 9e-73
 Identities = 132/159 (83%), Positives = 144/159 (90%), Gaps = 1/159 (0%)
 Frame = -1

Query: 753 KPLFDFDRTRMFRSGLVGFSLHGSLSHYYYQFCEALFPFQDWWVVPVKVAFDQTAWAALW 574
           KPLF+FDRTR+ RSGLVGF+LHGSLSHYYYQ CEALFPFQ+WWVVP KVAFDQT W+A+W
Sbjct: 164 KPLFEFDRTRVLRSGLVGFTLHGSLSHYYYQLCEALFPFQEWWVVPAKVAFDQTVWSAIW 223

Query: 573 NSIYFVVLGLLRFESPASISSELKATFLPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDC 394
           NSIYFVVLGLLRFES  +I  ELK+TFLP+LTAGWKLWPFAHLITYGVIPVEQRLLWVDC
Sbjct: 224 NSIYFVVLGLLRFESLTNIYGELKSTFLPLLTAGWKLWPFAHLITYGVIPVEQRLLWVDC 283

Query: 393 VELIWVTILSTYSNEKSEAR-SEALLETNSKTQSISSED 280
           VELIWVTILSTYSNEKSEAR SEA  ET S T S +S++
Sbjct: 284 VELIWVTILSTYSNEKSEARISEAASETGSSTSSENSKE 322


>ref|XP_003539526.1| PREDICTED: peroxisomal membrane protein 2-like [Glycine max]
          Length = 322

 Score =  278 bits (711), Expect = 9e-73
 Identities = 132/159 (83%), Positives = 144/159 (90%), Gaps = 1/159 (0%)
 Frame = -1

Query: 753 KPLFDFDRTRMFRSGLVGFSLHGSLSHYYYQFCEALFPFQDWWVVPVKVAFDQTAWAALW 574
           KPLF+FDRTR+ RSGLVGF+LHGSLSHYYYQ CEALFPFQ+WWVVP KVAFDQT W+A+W
Sbjct: 164 KPLFEFDRTRVLRSGLVGFTLHGSLSHYYYQLCEALFPFQEWWVVPAKVAFDQTVWSAIW 223

Query: 573 NSIYFVVLGLLRFESPASISSELKATFLPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDC 394
           NSIYFVVLGLLRFES  +I  ELK+TFLP+LTAGWKLWPFAHLITYGVIPVEQRLLWVDC
Sbjct: 224 NSIYFVVLGLLRFESLTNIYGELKSTFLPLLTAGWKLWPFAHLITYGVIPVEQRLLWVDC 283

Query: 393 VELIWVTILSTYSNEKSEAR-SEALLETNSKTQSISSED 280
           VELIWVTILSTYSNEKSEAR SEA  ET S T S +S++
Sbjct: 284 VELIWVTILSTYSNEKSEARISEAASETGSSTSSENSKE 322


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