BLASTX nr result
ID: Coptis24_contig00001725
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00001725
(1835 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote... 697 0.0
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera] 697 0.0
ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1... 689 0.0
ref|XP_002531170.1| carbon catabolite repressor protein, putativ... 688 0.0
ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|2... 685 0.0
>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
product [Vitis vinifera]
Length = 603
Score = 697 bits (1799), Expect = 0.0
Identities = 356/500 (71%), Positives = 391/500 (78%), Gaps = 28/500 (5%)
Frame = +1
Query: 1 DAWQHHRVLHDRPXXXXXXXXXXXXXXLFGRL-----------------------GSAPV 111
DAWQHHRVLHDR LFGR GSAP+
Sbjct: 100 DAWQHHRVLHDR-AASAVNENGNEEEELFGRFNSTGSGSINTSLAPSASSASLANGSAPL 158
Query: 112 YPTA--EKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILTSRV 285
YP A +++ GE WFEVGRSKTYTPT DDIGHVLKFECV VDAETKL VGH ILTSRV
Sbjct: 159 YPAAVTQRSGGETWFEVGRSKTYTPTADDIGHVLKFECVVVDAETKLTVGHGSNILTSRV 218
Query: 286 IPAPTPTPRRLIPVDGIDMTSHLDLDGHTASSGTFTVLSYNILAEVYATTESYSYCPSWA 465
IPAP+PTPR LI V G+DM HLD DG +S+GTFTVLSYNIL++V+AT+E YSYCPSWA
Sbjct: 219 IPAPSPTPRHLISVSGVDMVGHLDSDGRISSAGTFTVLSYNILSDVFATSELYSYCPSWA 278
Query: 466 LSWSYRKQNLLREIVGYHSDIICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVSNGT 645
LSW YRKQNLLREIVGY +DI+CLQE+QSDHFEEFFAPELDKHGYQALYK+KT EV G
Sbjct: 279 LSWPYRKQNLLREIVGYRADIVCLQEIQSDHFEEFFAPELDKHGYQALYKRKTNEVYTGN 338
Query: 646 AHTVDGCATFFRRERFSHVKKYEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDNVAL 825
HT+DGCATFFRR+RFSHVKKYEVEFNKAA SLTDA++ P +KT LNRL+KDNVAL
Sbjct: 339 IHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAVV---PSAQKKTALNRLVKDNVAL 395
Query: 826 IAVLEAKFNNHGTD--AKRQLLCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASADIP 999
IAVLEAKF+ G D KRQLLCVANTH++V+Q+LKDVKLWQVHTLLKGLEKIAASADIP
Sbjct: 396 IAVLEAKFSYQGADIPGKRQLLCVANTHINVHQELKDVKLWQVHTLLKGLEKIAASADIP 455
Query: 1000 MLVCGDFNSVPGSAPHALLAMGKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSSFAR 1179
MLVCGDFNSVPGSAPHALLAMGKV+ MHPDL IDPLGI+ P +KL+HQLPLVSAYSSFAR
Sbjct: 456 MLVCGDFNSVPGSAPHALLAMGKVDPMHPDLAIDPLGILRPASKLTHQLPLVSAYSSFAR 515
Query: 1180 SRAP-GLEQQRMRTDLTTNEPLFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXXXRK 1356
GLEQQR R D +TNEPLFT+CTRDFI T+DYIFYTA+ RK
Sbjct: 516 MGVGIGLEQQRRRLDPSTNEPLFTHCTRDFIGTLDYIFYTADSLTVESLLELLDEDSLRK 575
Query: 1357 DTALPSPEWSSDHIALLAEF 1416
DTALPSPEWSSDHIALLAEF
Sbjct: 576 DTALPSPEWSSDHIALLAEF 595
>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
Length = 603
Score = 697 bits (1799), Expect = 0.0
Identities = 356/500 (71%), Positives = 391/500 (78%), Gaps = 28/500 (5%)
Frame = +1
Query: 1 DAWQHHRVLHDRPXXXXXXXXXXXXXXLFGRL-----------------------GSAPV 111
DAWQHHRVLHDR LFGR GSAP+
Sbjct: 100 DAWQHHRVLHDR-AASAVNENGNEEEELFGRFNSTGSGSINTSLAPSASSASLANGSAPL 158
Query: 112 YPTA--EKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILTSRV 285
YP A +++ GE WFEVGRSKTYTPT DDIGHVLKFECV VDAETKL VGH ILTSRV
Sbjct: 159 YPAAVTQRSGGETWFEVGRSKTYTPTADDIGHVLKFECVVVDAETKLTVGHGSNILTSRV 218
Query: 286 IPAPTPTPRRLIPVDGIDMTSHLDLDGHTASSGTFTVLSYNILAEVYATTESYSYCPSWA 465
IPAP+PTPR LI V G+DM HLD DG +S+GTFTVLSYNIL++V+AT+E YSYCPSWA
Sbjct: 219 IPAPSPTPRHLISVSGVDMVGHLDSDGRISSAGTFTVLSYNILSDVFATSELYSYCPSWA 278
Query: 466 LSWSYRKQNLLREIVGYHSDIICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVSNGT 645
LSW YRKQNLLREIVGY +DI+CLQE+QSDHFEEFFAPELDKHGYQALYK+KT EV G
Sbjct: 279 LSWPYRKQNLLREIVGYRADIVCLQEIQSDHFEEFFAPELDKHGYQALYKRKTNEVYTGN 338
Query: 646 AHTVDGCATFFRRERFSHVKKYEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDNVAL 825
HT+DGCATFFRR+RFSHVKKYEVEFNKAA SLTDA++ P +KT LNRL+KDNVAL
Sbjct: 339 IHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAVV---PSAQKKTALNRLVKDNVAL 395
Query: 826 IAVLEAKFNNHGTD--AKRQLLCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASADIP 999
IAVLEAKF+ G D KRQLLCVANTH++V+Q+LKDVKLWQVHTLLKGLEKIAASADIP
Sbjct: 396 IAVLEAKFSYQGADIPGKRQLLCVANTHINVHQELKDVKLWQVHTLLKGLEKIAASADIP 455
Query: 1000 MLVCGDFNSVPGSAPHALLAMGKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSSFAR 1179
MLVCGDFNSVPGSAPHALLAMGKV+ MHPDL IDPLGI+ P +KL+HQLPLVSAYSSFAR
Sbjct: 456 MLVCGDFNSVPGSAPHALLAMGKVDPMHPDLAIDPLGILRPASKLTHQLPLVSAYSSFAR 515
Query: 1180 SRAP-GLEQQRMRTDLTTNEPLFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXXXRK 1356
GLEQQR R D +TNEPLFT+CTRDFI T+DYIFYTA+ RK
Sbjct: 516 MGVGIGLEQQRRRLDPSTNEPLFTHCTRDFIGTLDYIFYTADSLTVESLLELLDEDSLRK 575
Query: 1357 DTALPSPEWSSDHIALLAEF 1416
DTALPSPEWSSDHIALLAEF
Sbjct: 576 DTALPSPEWSSDHIALLAEF 595
>ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1|
unknown [Populus trichocarpa] gi|222867975|gb|EEF05106.1|
predicted protein [Populus trichocarpa]
Length = 603
Score = 689 bits (1779), Expect = 0.0
Identities = 352/500 (70%), Positives = 390/500 (78%), Gaps = 28/500 (5%)
Frame = +1
Query: 1 DAWQHHRVLHDRPXXXXXXXXXXXXXXLFGRL-----------------------GSAPV 111
DAWQHHRVLHDR LFGR GS P+
Sbjct: 100 DAWQHHRVLHDR-AASAINENGNEEEELFGRFNSSGSGVMNTSLSGSASSASLTNGSTPL 158
Query: 112 YPTA--EKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILTSRV 285
YP A +++ GE WFEVGRSKTYTP+ DDIGHVLKFECV VDAETKLPVGH+ +LTSRV
Sbjct: 159 YPAAVTQRSGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAETKLPVGHSNTLLTSRV 218
Query: 286 IPAPTPTPRRLIPVDGIDMTSHLDLDGHTASSGTFTVLSYNILAEVYATTESYSYCPSWA 465
IPAP+PTPRRLI V G+D + LD DG +SSGTFTVLSYNIL++VYAT ++YSYCPSWA
Sbjct: 219 IPAPSPTPRRLISVSGLDAMAPLDSDGRISSSGTFTVLSYNILSDVYATNDTYSYCPSWA 278
Query: 466 LSWSYRKQNLLREIVGYHSDIICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVSNGT 645
LSW YR+QNLLREIVGY +DI+CLQEVQSDH+EEFFAPELDKHGYQALYK+KT EV N
Sbjct: 279 LSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFAPELDKHGYQALYKRKTNEVYNIN 338
Query: 646 AHTVDGCATFFRRERFSHVKKYEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDNVAL 825
HT+DGCATFFRR+RFSHVKKYEVEFNKAA SLTDAL+ P RKT LNRL+KDNVAL
Sbjct: 339 THTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDALV---PSAQRKTALNRLVKDNVAL 395
Query: 826 IAVLEAKFNNHGTD--AKRQLLCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASADIP 999
I VLEAKF+N G D KRQLLCVANTH++V+QDLKDVKLWQV TLLKGLEKIAASADIP
Sbjct: 396 IVVLEAKFSNQGADNPGKRQLLCVANTHINVHQDLKDVKLWQVLTLLKGLEKIAASADIP 455
Query: 1000 MLVCGDFNSVPGSAPHALLAMGKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSSFAR 1179
MLVCGDFNSVPGSAPH+LLAMGKV+Q+HPDL +DPLGI+ P +KL+HQLPLVSAYSSFAR
Sbjct: 456 MLVCGDFNSVPGSAPHSLLAMGKVDQLHPDLVVDPLGILRPHSKLTHQLPLVSAYSSFAR 515
Query: 1180 -SRAPGLEQQRMRTDLTTNEPLFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXXXRK 1356
G +QQR R D TTNEPLFT CTRDFI T+DYIFYTA+ RK
Sbjct: 516 VGVGLGSDQQRRRMDATTNEPLFTNCTRDFIGTLDYIFYTADSLTVESLLELLDEESLRK 575
Query: 1357 DTALPSPEWSSDHIALLAEF 1416
DTALPSPEWSSDHIALLAEF
Sbjct: 576 DTALPSPEWSSDHIALLAEF 595
>ref|XP_002531170.1| carbon catabolite repressor protein, putative [Ricinus communis]
gi|223529240|gb|EEF31213.1| carbon catabolite repressor
protein, putative [Ricinus communis]
Length = 603
Score = 688 bits (1776), Expect = 0.0
Identities = 351/500 (70%), Positives = 392/500 (78%), Gaps = 28/500 (5%)
Frame = +1
Query: 1 DAWQHHRVLHDRPXXXXXXXXXXXXXXLFGRL-----------------------GSAPV 111
DAWQHHRVLHDR +FGR GSAP+
Sbjct: 100 DAWQHHRVLHDR-AASAVSENGNDEEEVFGRFNSTGSGVLNTSLSSSASTASLTNGSAPL 158
Query: 112 YP--TAEKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILTSRV 285
YP A+++ GE WFEVGRSKTYTP+ DDIGHVLKFECV VDAE+KLPVGH ILTSRV
Sbjct: 159 YPAAVAQRSGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAESKLPVGHPNTILTSRV 218
Query: 286 IPAPTPTPRRLIPVDGIDMTSHLDLDGHTASSGTFTVLSYNILAEVYATTESYSYCPSWA 465
IPAP+PTPRRLIPV GID+ HLD DG +SSGTFTVLSYNIL++VYAT+E+YSYCPSWA
Sbjct: 219 IPAPSPTPRRLIPVSGIDVMGHLDSDGRISSSGTFTVLSYNILSDVYATSETYSYCPSWA 278
Query: 466 LSWSYRKQNLLREIVGYHSDIICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVSNGT 645
LSW YR+QNLLREIVGY +DI+CLQEVQ+DH+EEFFAPELDKHGYQALYK+KT EV +G
Sbjct: 279 LSWPYRRQNLLREIVGYRADIVCLQEVQNDHYEEFFAPELDKHGYQALYKRKTNEVYSGN 338
Query: 646 AHTVDGCATFFRRERFSHVKKYEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDNVAL 825
+ T+DGCATFFRR+RFSHVKKYEVEFNKAA SLT+A++ P RKT LNRL+KDNVAL
Sbjct: 339 SPTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTEAVV---PSAQRKTALNRLVKDNVAL 395
Query: 826 IAVLEAKFNNHGTD--AKRQLLCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASADIP 999
I VLEAKF+N G D KRQLLCVANTHV+++ DLKDVKLWQV TLLKGLEKIAASADIP
Sbjct: 396 IVVLEAKFSNQGADNPGKRQLLCVANTHVNIHHDLKDVKLWQVLTLLKGLEKIAASADIP 455
Query: 1000 MLVCGDFNSVPGSAPHALLAMGKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSSFAR 1179
MLVCGDFNS+PGSAPH+LLAMGKV+ +HPDL IDPLGI+ P +KL+HQLPLVSAYSSFAR
Sbjct: 456 MLVCGDFNSMPGSAPHSLLAMGKVDPLHPDLVIDPLGILRPHSKLTHQLPLVSAYSSFAR 515
Query: 1180 -SRAPGLEQQRMRTDLTTNEPLFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXXXRK 1356
GLEQQR R D TNEPLFT CTRDFI T+DYIFYTA+ RK
Sbjct: 516 LGVGLGLEQQRRRMDPATNEPLFTNCTRDFIGTLDYIFYTADSLTVESLLELLDEESLRK 575
Query: 1357 DTALPSPEWSSDHIALLAEF 1416
DTALPSPEWSSDHIALLAEF
Sbjct: 576 DTALPSPEWSSDHIALLAEF 595
>ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|222854327|gb|EEE91874.1|
predicted protein [Populus trichocarpa]
Length = 602
Score = 685 bits (1768), Expect = 0.0
Identities = 352/499 (70%), Positives = 385/499 (77%), Gaps = 27/499 (5%)
Frame = +1
Query: 1 DAWQHHRVLHDRPXXXXXXXXXXXXXXLFGRL-----------------------GSAPV 111
DAWQHHRVLHDR LFGR GS P+
Sbjct: 100 DAWQHHRVLHDR-AASAVNENGNEEEELFGRYNSSGSGVLNTSLSGSASSASLTNGSTPL 158
Query: 112 YPTA-EKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILTSRVI 288
YP A + SGE WFEVGRSK YTP+ DDIGHVLKFECV VDAETKLPVGH +LTSRVI
Sbjct: 159 YPAAVTQRSGETWFEVGRSKIYTPSADDIGHVLKFECVVVDAETKLPVGHPNTLLTSRVI 218
Query: 289 PAPTPTPRRLIPVDGIDMTSHLDLDGHTASSGTFTVLSYNILAEVYATTESYSYCPSWAL 468
PAP+PTPRRLIPV G+D LDLDG +S+GTFTVLSYNIL++VYAT E+YSYCPSWAL
Sbjct: 219 PAPSPTPRRLIPVSGLDAMVPLDLDGRISSTGTFTVLSYNILSDVYATNETYSYCPSWAL 278
Query: 469 SWSYRKQNLLREIVGYHSDIICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVSNGTA 648
SW YR+QNLLREIVGY +DI+CLQEVQSDH+EEFFAPELDKHGYQALYK+KT EV G
Sbjct: 279 SWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFAPELDKHGYQALYKRKTNEVYAGNT 338
Query: 649 HTVDGCATFFRRERFSHVKKYEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDNVALI 828
HT+DGCATFFRR+RFSHVKKYEVEFNKAA SLTDAL+ P RKT LNRL+KDNVALI
Sbjct: 339 HTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDALV---PSAQRKTALNRLVKDNVALI 395
Query: 829 AVLEAKFNNHGTD--AKRQLLCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASADIPM 1002
VLEAKF+N G D KRQLLCVANTH++V+QDLKDVKLWQV TLLKGLEKIAASADIPM
Sbjct: 396 VVLEAKFSNQGVDNPGKRQLLCVANTHINVHQDLKDVKLWQVLTLLKGLEKIAASADIPM 455
Query: 1003 LVCGDFNSVPGSAPHALLAMGKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSSFAR- 1179
LVCGDFNSVPGSAPH+LLAMGKV+ +HPDL +DPLGI+ P KL+HQLPLVSAYSSFAR
Sbjct: 456 LVCGDFNSVPGSAPHSLLAMGKVDPLHPDLVVDPLGILRPHNKLTHQLPLVSAYSSFARV 515
Query: 1180 SRAPGLEQQRMRTDLTTNEPLFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXXXRKD 1359
G +QQR R D TTNEPLFT CTRDFI +DYIFYTA+ RKD
Sbjct: 516 GVGLGSDQQRRRMDATTNEPLFTNCTRDFIGALDYIFYTADSLMVESLLELLDEESLRKD 575
Query: 1360 TALPSPEWSSDHIALLAEF 1416
TALPSPEWSSDHIALLAEF
Sbjct: 576 TALPSPEWSSDHIALLAEF 594