BLASTX nr result

ID: Coptis24_contig00001708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001708
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278553.1| PREDICTED: uncharacterized protein LOC100253...    82   1e-13
ref|XP_002520815.1| conserved hypothetical protein [Ricinus comm...    77   3e-12
ref|XP_002315124.1| predicted protein [Populus trichocarpa] gi|2...    77   3e-12
gb|ABK26779.1| unknown [Picea sitchensis]                              77   3e-12
ref|XP_002265673.1| PREDICTED: uncharacterized protein LOC100243...    77   5e-12

>ref|XP_002278553.1| PREDICTED: uncharacterized protein LOC100253518 isoform 1 [Vitis
           vinifera] gi|359486360|ref|XP_003633434.1| PREDICTED:
           uncharacterized protein LOC100253518 isoform 2 [Vitis
           vinifera]
          Length = 156

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 39/65 (60%), Positives = 51/65 (78%)
 Frame = -1

Query: 196 SKPSNLNMEYTDEQSRVSLSDVVSDYARRWFQDTLEEAKDGDSSMQILVGQMYYNCYGVS 17
           S+   L ME ++ Q R+ L+ VVSD A+RWFQDTL+EAK GD++MQ+LVGQMY++ YGVS
Sbjct: 52  SERVRLKMESSEGQRRMPLAQVVSDCAKRWFQDTLKEAKAGDTTMQVLVGQMYFSGYGVS 111

Query: 16  RDTSK 2
           RD  K
Sbjct: 112 RDAQK 116


>ref|XP_002520815.1| conserved hypothetical protein [Ricinus communis]
           gi|223539946|gb|EEF41524.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 159

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 35/54 (64%), Positives = 45/54 (83%)
 Frame = -1

Query: 163 DEQSRVSLSDVVSDYARRWFQDTLEEAKDGDSSMQILVGQMYYNCYGVSRDTSK 2
           D ++R+ LS+VVSD  RRWFQDTL+EAK GD SMQ+LVGQMY+N YG+ +D+ K
Sbjct: 63  DGKNRLPLSNVVSDCVRRWFQDTLKEAKAGDISMQVLVGQMYFNGYGIPKDSQK 116


>ref|XP_002315124.1| predicted protein [Populus trichocarpa] gi|222864164|gb|EEF01295.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 36/54 (66%), Positives = 42/54 (77%)
 Frame = -1

Query: 163 DEQSRVSLSDVVSDYARRWFQDTLEEAKDGDSSMQILVGQMYYNCYGVSRDTSK 2
           D Q RV L  VVSD A+RWF+DTL+EAK GD SMQ+LVGQMY+N YGV +D  K
Sbjct: 60  DGQKRVPLGQVVSDCAKRWFEDTLKEAKTGDISMQVLVGQMYFNGYGVPKDVEK 113


>gb|ABK26779.1| unknown [Picea sitchensis]
          Length = 144

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 35/61 (57%), Positives = 48/61 (78%)
 Frame = -1

Query: 184 NLNMEYTDEQSRVSLSDVVSDYARRWFQDTLEEAKDGDSSMQILVGQMYYNCYGVSRDTS 5
           N+ M+  +EQ+R+ L +VV+D ARRWFQD+L+EAK GD+ MQ+LVGQMY + YGV RD  
Sbjct: 44  NMKMQSGEEQNRLPLKEVVADCARRWFQDSLKEAKAGDTGMQVLVGQMYCSGYGVHRDIQ 103

Query: 4   K 2
           +
Sbjct: 104 R 104


>ref|XP_002265673.1| PREDICTED: uncharacterized protein LOC100243041 isoform 2 [Vitis
           vinifera]
          Length = 99

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 36/50 (72%), Positives = 40/50 (80%)
 Frame = -1

Query: 151 RVSLSDVVSDYARRWFQDTLEEAKDGDSSMQILVGQMYYNCYGVSRDTSK 2
           RV LS+VVSD  +RWFQDTL EAK GD SMQ+LVGQMYY+ YGV RD  K
Sbjct: 12  RVPLSEVVSDCVKRWFQDTLREAKSGDVSMQVLVGQMYYSGYGVPRDAQK 61


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