BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001693
         (1228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297879.1| predicted protein [Populus trichocarpa] gi|2...   410   e-112
ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit R...   405   e-110
sp|P49729.1|UCRI1_TOBAC RecName: Full=Cytochrome b-c1 complex su...   403   e-110
ref|XP_004143762.1| PREDICTED: cytochrome b-c1 complex subunit R...   402   e-110
sp|P51132.1|UCRI2_TOBAC RecName: Full=Cytochrome b-c1 complex su...   402   e-109

>ref|XP_002297879.1| predicted protein [Populus trichocarpa] gi|222845137|gb|EEE82684.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  410 bits (1053), Expect = e-112
 Identities = 204/265 (76%), Positives = 228/265 (86%)
 Frame = +1

Query: 91  NQTAPAMISRNLINXXXXXXXXXXXYSTRSIVVPFYGFNSRSDLFFFGSTRGFASDSLTS 270
           +QT  A +SRN               S+R I+ P Y F+   DL      RGF+S +LTS
Sbjct: 19  SQTTSAFVSRN--TAFVSDDGRDSAASSRPILSP-YQFSFPPDLI-----RGFSSGALTS 70

Query: 271 RPDTGIMPNIPPTVAAVQNPTSKIVYDDYNHERFPPGDPSKRAFAYFVLTGGRFVYASLI 450
             D GI+ ++PPTVAAV+NPTSKIVYD++NHER+PPGDPSKRAFAYFVLTGGRFVYASLI
Sbjct: 71  GHDMGIISDLPPTVAAVKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLI 130

Query: 451 RLLILKFVLSMSASKDVLALASLEVDISSIEPGSTVTVKWRGKPVFIRRRTEDDIQLANS 630
           RLL+LKFVLSMSASKDVLA+ASLEVD+SSIEPGSTVTVKWRGKPVFIRRRTEDDI+LANS
Sbjct: 131 RLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANS 190

Query: 631 VDVATLRDPQEDAVRVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRI 810
           VD+A+LRDPQEDA RVKNPEWL+VVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRI
Sbjct: 191 VDLASLRDPQEDAARVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRI 250

Query: 811 RKGPAPYNLEVPTYSFLEDNKLLIG 885
           RKGPAPYNLEVPTYSF+E+NKLL+G
Sbjct: 251 RKGPAPYNLEVPTYSFMEENKLLVG 275


>ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2, mitochondrial
           [Vitis vinifera] gi|296085532|emb|CBI29264.3| unnamed
           protein product [Vitis vinifera]
          Length = 272

 Score =  405 bits (1041), Expect = e-110
 Identities = 197/239 (82%), Positives = 218/239 (91%)
 Frame = +1

Query: 169 STRSIVVPFYGFNSRSDLFFFGSTRGFASDSLTSRPDTGIMPNIPPTVAAVQNPTSKIVY 348
           S+RSI  P   FNS     F    RGF+S+SL    D G++ ++PPTVAA++NPTSKIVY
Sbjct: 39  SSRSISSPHL-FNSE----FRDLIRGFSSESLAPSHDLGMISDLPPTVAALKNPTSKIVY 93

Query: 349 DDYNHERFPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVD 528
           DD+NHERFPPGDPSKRAFAYFVLTGGRF+YASLIRLL+LKFVLSMSASKDVLALAS+EVD
Sbjct: 94  DDHNHERFPPGDPSKRAFAYFVLTGGRFIYASLIRLLVLKFVLSMSASKDVLALASIEVD 153

Query: 529 ISSIEPGSTVTVKWRGKPVFIRRRTEDDIQLANSVDVATLRDPQEDAVRVKNPEWLIVVG 708
           +SSIEPGSTVTVKWRGKPVFIRRRTEDDI+LANSVDV +LRDPQEDAVRVK+PEWLIV+G
Sbjct: 154 LSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDAVRVKDPEWLIVIG 213

Query: 709 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLIG 885
           VCTHLGCIPLPNAGDFGGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTYSFLE+NKL+IG
Sbjct: 214 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYSFLEENKLMIG 272


>sp|P49729.1|UCRI1_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-1,
           mitochondrial; AltName: Full=Complex III subunit 5-1;
           AltName: Full=Rieske iron-sulfur protein 1; Short=RISP1;
           AltName: Full=Ubiquinol-cytochrome c reductase
           iron-sulfur subunit 1; Flags: Precursor
           gi|170322|gb|AAA34112.1| Rieske Fe-S protein, partial
           [Nicotiana tabacum]
          Length = 258

 Score =  403 bits (1035), Expect = e-110
 Identities = 188/220 (85%), Positives = 210/220 (95%)
 Frame = +1

Query: 226 FFGSTRGFASDSLTSRPDTGIMPNIPPTVAAVQNPTSKIVYDDYNHERFPPGDPSKRAFA 405
           F   TRGF+S+S++   D G++P++PPTVAA++NPTSKIVYD++NHER+PPGDPSKRAFA
Sbjct: 39  FLHHTRGFSSNSVSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFA 98

Query: 406 YFVLTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDISSIEPGSTVTVKWRGKPV 585
           YFVLTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVD+SSIEPG+TVTVKWRGKPV
Sbjct: 99  YFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPV 158

Query: 586 FIRRRTEDDIQLANSVDVATLRDPQEDAVRVKNPEWLIVVGVCTHLGCIPLPNAGDFGGW 765
           FIRRRTEDDI LANSVD+ +LRDPQ+DA RVKNPEWL+V+GVCTHLGCIPLPNAGDFGGW
Sbjct: 159 FIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGW 218

Query: 766 FCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLIG 885
           FCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLE+NKLLIG
Sbjct: 219 FCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 258


>ref|XP_004143762.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2,
           mitochondrial-like [Cucumis sativus]
           gi|449516924|ref|XP_004165496.1| PREDICTED: cytochrome
           b-c1 complex subunit Rieske-2, mitochondrial-like
           [Cucumis sativus]
          Length = 274

 Score =  402 bits (1033), Expect = e-110
 Identities = 187/220 (85%), Positives = 210/220 (95%)
 Frame = +1

Query: 226 FFGSTRGFASDSLTSRPDTGIMPNIPPTVAAVQNPTSKIVYDDYNHERFPPGDPSKRAFA 405
           F  ++RGFASD+LTS  +  ++P++P T+AAV+NPTSKIVYD+YNHERFPPGDPSKRAFA
Sbjct: 55  FDRNSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFA 114

Query: 406 YFVLTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDISSIEPGSTVTVKWRGKPV 585
           YFVL+GGRFVYASLIRLL+LKFVLSMSASKDVLALASLEVD+SSIEPG+TVTVKWRGKPV
Sbjct: 115 YFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPV 174

Query: 586 FIRRRTEDDIQLANSVDVATLRDPQEDAVRVKNPEWLIVVGVCTHLGCIPLPNAGDFGGW 765
           FIRRRTE+DI+LANSVD+ TLRDPQ+D  RVK+PEWL+VVGVCTHLGCIPLPNAGDFGGW
Sbjct: 175 FIRRRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGW 234

Query: 766 FCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLIG 885
           FCPCHGSHYD+SGRIRKGPAPYNLEVPTY+FLEDNKLLIG
Sbjct: 235 FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274


>sp|P51132.1|UCRI2_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-2,
           mitochondrial; AltName: Full=Complex III subunit 5-2;
           AltName: Full=Rieske iron-sulfur protein 2; Short=RISP2;
           AltName: Full=Ubiquinol-cytochrome c reductase
           iron-sulfur subunit 2; Flags: Precursor
           gi|530052|gb|AAA20831.1| Rieske iron-sulfur protein
           [Nicotiana tabacum]
          Length = 272

 Score =  402 bits (1032), Expect = e-109
 Identities = 187/220 (85%), Positives = 210/220 (95%)
 Frame = +1

Query: 226 FFGSTRGFASDSLTSRPDTGIMPNIPPTVAAVQNPTSKIVYDDYNHERFPPGDPSKRAFA 405
           F   TRGF+S+S++   D G++P++PPTVAA++NPTSKIVYD++NHER+PPGDPSKRAFA
Sbjct: 53  FLHHTRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFA 112

Query: 406 YFVLTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDISSIEPGSTVTVKWRGKPV 585
           YFVLTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVD+SSIEPG+TVTVKWRGKPV
Sbjct: 113 YFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPV 172

Query: 586 FIRRRTEDDIQLANSVDVATLRDPQEDAVRVKNPEWLIVVGVCTHLGCIPLPNAGDFGGW 765
           FIRRRTEDDI LANSVD+ +LRDPQ+DA RVK+PEWL+V+GVCTHLGCIPLPNAGDFGGW
Sbjct: 173 FIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGW 232

Query: 766 FCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLIG 885
           FCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLE+NKLLIG
Sbjct: 233 FCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272