BLASTX nr result

ID: Coptis24_contig00001629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001629
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527704.1| Auxin efflux carrier component, putative [Ri...   293   2e-77
ref|XP_002324677.1| auxin efflux carrier component [Populus tric...   291   9e-77
ref|XP_004146341.1| PREDICTED: auxin efflux carrier component 2-...   290   2e-76
dbj|BAJ10465.1| auxin efflux facilitator [Cucumis sativus]            290   2e-76
ref|NP_001234170.1| auxin efflux facilitator SlPIN2 [Solanum lyc...   290   3e-76

>ref|XP_002527704.1| Auxin efflux carrier component, putative [Ricinus communis]
           gi|223532935|gb|EEF34703.1| Auxin efflux carrier
           component, putative [Ricinus communis]
          Length = 636

 Score =  293 bits (750), Expect = 2e-77
 Identities = 146/157 (92%), Positives = 152/157 (96%), Gaps = 1/157 (0%)
 Frame = -3

Query: 469 MITGKDIYDVLAAIVPLYVAMILAYGSVRWWKVFTPDQCSGINRFVAVFAVPLLSFHFIS 290
           MITGKDIYDVLAAIVPLYVAMILAYGSVRWWK+FTPDQCSGINRFVAVFAVPLLSFHFIS
Sbjct: 1   MITGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 289 LNDPYAMNYRFIAADSLQKVVILFALFIWQMFF-NGNIEWMITLFSLSTLPNTLVMGIPL 113
            NDPYAMNYRFIAADSLQKVVIL ALF+WQ F  +G++EWMITLFSLSTLPNTLVMGIPL
Sbjct: 61  SNDPYAMNYRFIAADSLQKVVILAALFLWQAFSKSGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 112 LKAMYGEFSGNLMVQIVVLQSVIWYTLMLFMFEYRGA 2
           LKAMYGEFSG+LMVQIVVLQSVIWYTLMLFMFEYRGA
Sbjct: 121 LKAMYGEFSGSLMVQIVVLQSVIWYTLMLFMFEYRGA 157


>ref|XP_002324677.1| auxin efflux carrier component [Populus trichocarpa]
           gi|222866111|gb|EEF03242.1| auxin efflux carrier
           component [Populus trichocarpa]
          Length = 633

 Score =  291 bits (745), Expect = 9e-77
 Identities = 144/157 (91%), Positives = 151/157 (96%), Gaps = 1/157 (0%)
 Frame = -3

Query: 469 MITGKDIYDVLAAIVPLYVAMILAYGSVRWWKVFTPDQCSGINRFVAVFAVPLLSFHFIS 290
           MITGKDIYDVLAAIVPLYVAMILAYGSVRWWK+FTPDQCSGINRFVAVFAVPLLSFHFIS
Sbjct: 1   MITGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 289 LNDPYAMNYRFIAADSLQKVVILFALFIWQMFF-NGNIEWMITLFSLSTLPNTLVMGIPL 113
            NDPYAMN+RFIAAD+LQKVVIL ALFIWQ F   GN+EWMITLFSLSTLPNTLVMGIPL
Sbjct: 61  SNDPYAMNFRFIAADTLQKVVILGALFIWQAFSKRGNLEWMITLFSLSTLPNTLVMGIPL 120

Query: 112 LKAMYGEFSGNLMVQIVVLQSVIWYTLMLFMFEYRGA 2
           LKAMYG+FSGNLMVQIVVLQSVIWYT+MLF+FEYRGA
Sbjct: 121 LKAMYGDFSGNLMVQIVVLQSVIWYTIMLFLFEYRGA 157


>ref|XP_004146341.1| PREDICTED: auxin efflux carrier component 2-like [Cucumis sativus]
           gi|449520585|ref|XP_004167314.1| PREDICTED: auxin efflux
           carrier component 2-like [Cucumis sativus]
          Length = 645

 Score =  290 bits (743), Expect = 2e-76
 Identities = 142/157 (90%), Positives = 150/157 (95%), Gaps = 1/157 (0%)
 Frame = -3

Query: 469 MITGKDIYDVLAAIVPLYVAMILAYGSVRWWKVFTPDQCSGINRFVAVFAVPLLSFHFIS 290
           MITGKDIYDV +AIVPLYVAMILAYGSV+WWK+FTPDQCSGINRFVAVFAVPLLSFHFIS
Sbjct: 1   MITGKDIYDVFSAIVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 289 LNDPYAMNYRFIAADSLQKVVILFALFIWQMFF-NGNIEWMITLFSLSTLPNTLVMGIPL 113
            NDPYAMNY+FIAADSLQKVVILFALF+WQ F   G +EWMITLFSLSTLPNTLVMGIPL
Sbjct: 61  SNDPYAMNYQFIAADSLQKVVILFALFLWQTFSKQGTLEWMITLFSLSTLPNTLVMGIPL 120

Query: 112 LKAMYGEFSGNLMVQIVVLQSVIWYTLMLFMFEYRGA 2
           LKAMYG+FSGNLMVQIVVLQS+IWYTLMLFMFEYRGA
Sbjct: 121 LKAMYGDFSGNLMVQIVVLQSIIWYTLMLFMFEYRGA 157


>dbj|BAJ10465.1| auxin efflux facilitator [Cucumis sativus]
          Length = 649

 Score =  290 bits (742), Expect = 2e-76
 Identities = 141/157 (89%), Positives = 150/157 (95%), Gaps = 1/157 (0%)
 Frame = -3

Query: 469 MITGKDIYDVLAAIVPLYVAMILAYGSVRWWKVFTPDQCSGINRFVAVFAVPLLSFHFIS 290
           MITGKDIYDV +AIVPLYVAM+LAYGSV+WWK+FTPDQCSGINRFVAVFAVPLLSFHFIS
Sbjct: 1   MITGKDIYDVFSAIVPLYVAMVLAYGSVKWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 289 LNDPYAMNYRFIAADSLQKVVILFALFIWQMFF-NGNIEWMITLFSLSTLPNTLVMGIPL 113
            NDPYAMNY+FIAADSLQKVVILFALF+WQ F   G +EWMITLFSLSTLPNTLVMGIPL
Sbjct: 61  SNDPYAMNYQFIAADSLQKVVILFALFLWQTFSKQGTLEWMITLFSLSTLPNTLVMGIPL 120

Query: 112 LKAMYGEFSGNLMVQIVVLQSVIWYTLMLFMFEYRGA 2
           LKAMYG+FSGNLMVQIVVLQS+IWYTLMLFMFEYRGA
Sbjct: 121 LKAMYGDFSGNLMVQIVVLQSIIWYTLMLFMFEYRGA 157


>ref|NP_001234170.1| auxin efflux facilitator SlPIN2 [Solanum lycopersicum]
           gi|312983226|gb|ADR30409.1| auxin efflux facilitator
           SlPIN2 [Solanum lycopersicum]
          Length = 631

 Score =  290 bits (741), Expect = 3e-76
 Identities = 141/157 (89%), Positives = 149/157 (94%), Gaps = 1/157 (0%)
 Frame = -3

Query: 469 MITGKDIYDVLAAIVPLYVAMILAYGSVRWWKVFTPDQCSGINRFVAVFAVPLLSFHFIS 290
           MI GKDIYDVLAAI+PLYVAMILAYGSVRWWK+FTPDQCSGINRFVAVFAVPLL FHFIS
Sbjct: 1   MINGKDIYDVLAAIIPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLGFHFIS 60

Query: 289 LNDPYAMNYRFIAADSLQKVVILFALFIWQMFF-NGNIEWMITLFSLSTLPNTLVMGIPL 113
            NDPYAMNY FIAADSLQKVVILFALFIW +F   GN+EW+ITLFSLSTLPNTLVMGIPL
Sbjct: 61  TNDPYAMNYHFIAADSLQKVVILFALFIWHLFSKRGNLEWVITLFSLSTLPNTLVMGIPL 120

Query: 112 LKAMYGEFSGNLMVQIVVLQSVIWYTLMLFMFEYRGA 2
           LKAMYG+FSGNLMVQIVV+QSVIWYTLMLF+FEYRGA
Sbjct: 121 LKAMYGDFSGNLMVQIVVMQSVIWYTLMLFLFEYRGA 157


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