BLASTX nr result

ID: Coptis24_contig00001619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001619
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544997.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   108   1e-23
ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   105   3e-23
ref|XP_004150969.1| PREDICTED: uncharacterized protein At1g76660...   108   4e-23
ref|XP_004171545.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   108   4e-23
ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660...   108   5e-23

>ref|XP_003544997.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At1g76660-like [Glycine max]
          Length = 475

 Score =  108 bits (269), Expect(2) = 1e-23
 Identities = 52/78 (66%), Positives = 63/78 (80%)
 Frame = -2

Query: 359 SPDVPFALTFSSAMDLKGTSRSSYVTANALQATYPLYPESPASSLISPISGTSGDCLSSF 180
           SPDVPFA   SS++DLK + + +Y+TAN LQATY LYP SPASSLISPIS  SGDCLSS 
Sbjct: 155 SPDVPFAHFLSSSVDLKNSDKGNYITANDLQATYSLYPGSPASSLISPISRNSGDCLSSS 214

Query: 179 FPEREFRAKWAASISAQD 126
           FPEREFR +W +S+S ++
Sbjct: 215 FPEREFRPQWDSSLSPEN 232



 Score = 26.2 bits (56), Expect(2) = 1e-23
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 72  TSNNFMLSRDTTFFYPAASPQFHL 1
           T+   M S+DT FF PA   QF+L
Sbjct: 248 TNGVTMASQDTNFFCPATYAQFYL 271


>ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At1g76660-like [Glycine max]
          Length = 475

 Score =  105 bits (263), Expect(2) = 3e-23
 Identities = 51/78 (65%), Positives = 61/78 (78%)
 Frame = -2

Query: 359 SPDVPFALTFSSAMDLKGTSRSSYVTANALQATYPLYPESPASSLISPISGTSGDCLSSF 180
           SPDVPFA   SS++DLK   + +Y+TAN LQATY LYP SPASSLISPIS  SGDCLSS 
Sbjct: 155 SPDVPFAHFLSSSVDLKNNGKGNYITANDLQATYSLYPGSPASSLISPISRNSGDCLSSS 214

Query: 179 FPEREFRAKWAASISAQD 126
           FPEREF  +W +S+S ++
Sbjct: 215 FPEREFHPQWDSSLSPEN 232



 Score = 27.3 bits (59), Expect(2) = 3e-23
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -1

Query: 72  TSNNFMLSRDTTFFYPAASPQFHL 1
           TS   M S+DT FF PA   QF+L
Sbjct: 248 TSGVTMASQDTNFFCPATYAQFYL 271


>ref|XP_004150969.1| PREDICTED: uncharacterized protein At1g76660-like [Cucumis sativus]
          Length = 469

 Score =  108 bits (271), Expect(2) = 4e-23
 Identities = 52/78 (66%), Positives = 62/78 (79%)
 Frame = -2

Query: 359 SPDVPFALTFSSAMDLKGTSRSSYVTANALQATYPLYPESPASSLISPISGTSGDCLSSF 180
           SPDVPFA   SS+ DLKGT +++Y+ +N LQA Y LYP SPASSL+SPIS TSGDCLSS 
Sbjct: 155 SPDVPFAQFLSSSEDLKGTGKANYIASNDLQAAYSLYPGSPASSLVSPISRTSGDCLSSS 214

Query: 179 FPEREFRAKWAASISAQD 126
           FPER+FR +W +S S QD
Sbjct: 215 FPERDFRPQWNSSASLQD 232



 Score = 23.9 bits (50), Expect(2) = 4e-23
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 78  SGTSNNFMLSRDTTFFYPAASPQFHL 1
           +GTS   + S+D+ FF PA   QF+L
Sbjct: 249 AGTS---LASQDSNFFCPATFAQFYL 271


>ref|XP_004171545.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At1g76660-like [Cucumis sativus]
          Length = 421

 Score =  108 bits (271), Expect(2) = 4e-23
 Identities = 52/78 (66%), Positives = 62/78 (79%)
 Frame = -2

Query: 359 SPDVPFALTFSSAMDLKGTSRSSYVTANALQATYPLYPESPASSLISPISGTSGDCLSSF 180
           SPDVPFA   SS+ DLKGT +++Y+ +N LQA Y LYP SPASSL+SPIS TSGDCLSS 
Sbjct: 155 SPDVPFAQFLSSSEDLKGTGKANYIASNDLQAAYSLYPGSPASSLVSPISRTSGDCLSSS 214

Query: 179 FPEREFRAKWAASISAQD 126
           FPER+FR +W +S S QD
Sbjct: 215 FPERDFRPQWNSSASLQD 232



 Score = 23.9 bits (50), Expect(2) = 4e-23
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 78  SGTSNNFMLSRDTTFFYPAASPQFHL 1
           +GTS   + S+D+ FF PA   QF+L
Sbjct: 249 AGTS---LASQDSNFFCPATFAQFYL 271


>ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660-like [Vitis vinifera]
          Length = 484

 Score =  108 bits (271), Expect(2) = 5e-23
 Identities = 54/78 (69%), Positives = 61/78 (78%)
 Frame = -2

Query: 359 SPDVPFALTFSSAMDLKGTSRSSYVTANALQATYPLYPESPASSLISPISGTSGDCLSSF 180
           SPDVPFA   SS+MDLK   +++Y+ AN LQATY LYP SPASSLISPIS TSGDCLSS 
Sbjct: 161 SPDVPFAQFLSSSMDLKSAGKTNYIAANDLQATYSLYPGSPASSLISPISRTSGDCLSSS 220

Query: 179 FPEREFRAKWAASISAQD 126
           FPEREF  +W  SIS Q+
Sbjct: 221 FPEREFPPRWDPSISPQN 238



 Score = 23.5 bits (49), Expect(2) = 5e-23
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 54  LSRDTTFFYPAASPQFHL 1
           +S+D+ FF PA   QF+L
Sbjct: 259 ISQDSNFFCPATFAQFYL 276


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