BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001608
         (1372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238374.1| 60S acidic ribosomal protein P0 [Glycine max...   496   e-138
ref|NP_001239676.1| uncharacterized protein LOC100777482 [Glycin...   495   e-138
ref|XP_003616595.1| 60S acidic ribosomal protein p0 [Medicago tr...   492   e-136
ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [...   491   e-136
ref|XP_002276842.1| PREDICTED: 60S acidic ribosomal protein P0 [...   491   e-136

>ref|NP_001238374.1| 60S acidic ribosomal protein P0 [Glycine max]
            gi|1710587|sp|P50346.1|RLA0_SOYBN RecName: Full=60S
            acidic ribosomal protein P0 gi|1196897|gb|AAB63814.1|
            acidic ribosomal protein P0 [Glycine max]
          Length = 320

 Score =  496 bits (1277), Expect = e-138
 Identities = 249/278 (89%), Positives = 270/278 (97%)
 Frame = -3

Query: 1178 MAPKQTKAEKKIAYDHKLCELLDEFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNT 999
            MAPKQTKAEKKIAYD KLC+L++E+ QILVV +DNVGSNQLQNIR+GLRGDSVVLMGKNT
Sbjct: 1    MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 998  MMKRTVRLHSEKTGNKAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 819
            MMKR+VR+H+EKTGN A+LNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61   MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 818  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAK 639
            PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI+K DKVGSSEAALLAK
Sbjct: 121  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180

Query: 638  LGIRPFSYGLVVLTVYDNGSVFNPEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAA 459
            LGIRPFSYGLVVL+VYDNGSVF+PEVLDLTEDDL+G+FAAGVSMVTSL+LAIS+PTLAAA
Sbjct: 181  LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 458  PHMFINAYKNVLAIAVATDYSYPHADKVKEILKDPSKY 345
            PHMF+NAYKNVLA+AV TDYS+P ADKVKE LKDPSK+
Sbjct: 241  PHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKF 278


>ref|NP_001239676.1| uncharacterized protein LOC100777482 [Glycine max]
            gi|255641162|gb|ACU20858.1| unknown [Glycine max]
          Length = 319

 Score =  495 bits (1275), Expect = e-138
 Identities = 257/319 (80%), Positives = 277/319 (86%)
 Frame = -3

Query: 1178 MAPKQTKAEKKIAYDHKLCELLDEFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNT 999
            MAPKQTKAEKKIAYD KLC+L++E+ QILVV +DNVGSNQLQNIR+GLRGDSVVLMGKNT
Sbjct: 1    MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 998  MMKRTVRLHSEKTGNKAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 819
            MMKR+VR+H+EKTGN A+LNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61   MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 818  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAK 639
            PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKK DKVGSSEAALLAK
Sbjct: 121  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 638  LGIRPFSYGLVVLTVYDNGSVFNPEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAA 459
            LGIRPFSYGLVVL+VYDNGSVF+PEVLDLTEDDL+ +FAAGVSMVTSL+LAIS+PTLAAA
Sbjct: 181  LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 458  PHMFINAYKNVLAIAVATDYSYPHADKVKEILKDPSKYXXXXXXXXXXXXXXXXXXXXXX 279
            PHMF+NAYKNVLA+AV TDYS+P ADKVKE LKDPSK+                      
Sbjct: 241  PHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAESGAPAAAKEEE 300

Query: 278  XXXXXXXXXXXDMGFSLFD 222
                       DMGFSLFD
Sbjct: 301  KKEEPAEESDDDMGFSLFD 319


>ref|XP_003616595.1| 60S acidic ribosomal protein p0 [Medicago truncatula]
            gi|355517930|gb|AES99553.1| 60S acidic ribosomal protein
            p0 [Medicago truncatula]
          Length = 323

 Score =  492 bits (1266), Expect = e-136
 Identities = 250/278 (89%), Positives = 265/278 (95%)
 Frame = -3

Query: 1178 MAPKQTKAEKKIAYDHKLCELLDEFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNT 999
            MAPK TKAEKK AYD KLC+LLDEF QIL+V ADNVGS QLQNIR GLRGDSVVLMGKNT
Sbjct: 1    MAPKPTKAEKKQAYDVKLCQLLDEFTQILIVNADNVGSKQLQNIRGGLRGDSVVLMGKNT 60

Query: 998  MMKRTVRLHSEKTGNKAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 819
            MMKR+VR+H+EKTGN AFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61   MMKRSVRMHAEKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 818  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAK 639
            PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKK DKVGSSEAALLAK
Sbjct: 121  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 638  LGIRPFSYGLVVLTVYDNGSVFNPEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAA 459
            LGIRPFSYGLVVL+VYDNGSVFNPEVLDLTEDDL+ +FA GVSMVTSL+LAIS+PTLAAA
Sbjct: 181  LGIRPFSYGLVVLSVYDNGSVFNPEVLDLTEDDLVAKFAIGVSMVTSLSLAISYPTLAAA 240

Query: 458  PHMFINAYKNVLAIAVATDYSYPHADKVKEILKDPSKY 345
            PHMF+NAYKNVLA+AVAT+YS+P ADKVKE LKDPSK+
Sbjct: 241  PHMFVNAYKNVLAVAVATEYSFPEADKVKEFLKDPSKF 278


>ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
          Length = 320

 Score =  491 bits (1263), Expect = e-136
 Identities = 247/278 (88%), Positives = 269/278 (96%)
 Frame = -3

Query: 1178 MAPKQTKAEKKIAYDHKLCELLDEFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNT 999
            MA K +KA+KKIAYD KLC+LLDE++QIL+ AADNVGSNQLQNIR+GLRGDSVVLMGKNT
Sbjct: 1    MAVKPSKADKKIAYDQKLCQLLDEYSQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 998  MMKRTVRLHSEKTGNKAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 819
            MMKR++RLH+EKTGN AFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61   MMKRSIRLHAEKTGNTAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 818  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAK 639
            PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKK DKVGSSEAALLAK
Sbjct: 121  PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 638  LGIRPFSYGLVVLTVYDNGSVFNPEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAA 459
            LGIRPFSYGLVVL+VYDNGSVF+PEVLDLTE+DL+ +FAAGVSMVTSL+LAIS+PTLAAA
Sbjct: 181  LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEEDLIEKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 458  PHMFINAYKNVLAIAVATDYSYPHADKVKEILKDPSKY 345
            PHMFINAYKNVLA+AVAT+YS+P ADKVKE LKDPSK+
Sbjct: 241  PHMFINAYKNVLAVAVATEYSFPQADKVKEYLKDPSKF 278


>ref|XP_002276842.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
          Length = 320

 Score =  491 bits (1263), Expect = e-136
 Identities = 245/278 (88%), Positives = 269/278 (96%)
 Frame = -3

Query: 1178 MAPKQTKAEKKIAYDHKLCELLDEFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNT 999
            MA K +KA+KKIAYD KLC+LLDE+ QIL+ AADNVGSNQLQNIR+GLRGDSVVLMGKNT
Sbjct: 1    MAVKPSKADKKIAYDQKLCQLLDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 998  MMKRTVRLHSEKTGNKAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 819
            MMKR++RLH+EKTGN+AFLNLIPLLVGNVGLIFT+GDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 61   MMKRSIRLHAEKTGNQAFLNLIPLLVGNVGLIFTRGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 818  PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAK 639
            PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI+K DKVGSSEAALLAK
Sbjct: 121  PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180

Query: 638  LGIRPFSYGLVVLTVYDNGSVFNPEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAA 459
            LGIRPFSYGLVVL+VYDNGSVF+PEVLDLTE+DLM +FAAGVSMVTSL+LAIS+PTLAAA
Sbjct: 181  LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEEDLMEKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 458  PHMFINAYKNVLAIAVATDYSYPHADKVKEILKDPSKY 345
            PHMF+NAYKNVL++AVATDYS+P ADKVKE LKDPSK+
Sbjct: 241  PHMFVNAYKNVLSVAVATDYSFPQADKVKEFLKDPSKF 278