BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001578
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, puta...   228   3e-57
gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa]         226   1e-56
dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]     222   1e-55
ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medic...   214   3e-53
gb|AFK47692.1| unknown [Medicago truncatula]                          212   2e-52

>ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
           gi|223527725|gb|EEF29831.1| geranyl geranyl
           pyrophosphate synthase, putative [Ricinus communis]
          Length = 308

 Score =  228 bits (580), Expect = 3e-57
 Identities = 119/226 (52%), Positives = 154/226 (68%), Gaps = 2/226 (0%)
 Frame = -1

Query: 987 VSMSQNQTSWAATINSEVEAHIKQALTGRNPASVYHPMNHLIFEIPRSMAPALCIAACES 808
           V  + ++  +   IN+++E H+K+A+  R P  V+ PM+HL F  PRS APALCIAACE 
Sbjct: 39  VMSNSSKIDYWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPALCIAACEL 98

Query: 807 VGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPKP--KPMPHHVYGANIELLTADSMVP 634
           VGG +DQA+AAASAL LM  + +THE + L+D+P+P  +PM HH +G NIELLT D M+P
Sbjct: 99  VGGSRDQALAAASALRLMIAAAFTHENIPLTDRPRPSARPMFHHTFGPNIELLTGDGMIP 158

Query: 633 FAYELLAAMDDPTNTNSDRILRVMIEIGRAVGSQGMVNGQYLKVRCLGLDGDEPCEKGMV 454
           FA+ELLA +++P   NSDRILRVMIEI RA+GSQGMV GQY + +     GDE      +
Sbjct: 159 FAFELLAQLNNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVGDELFHVAWL 218

Query: 453 DQVFEKKGGALYSXXXXXXXXXXXGTDEEIEKLRRYGLYVGMIHGI 316
             V +KK GA ++           G +EEIEKLRRYGLYVG I GI
Sbjct: 219 RDVCKKKEGASHACAGACGAILGGGNEEEIEKLRRYGLYVGTIQGI 264


>gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa]
          Length = 301

 Score =  226 bits (575), Expect = 1e-56
 Identities = 119/232 (51%), Positives = 160/232 (68%), Gaps = 3/232 (1%)
 Frame = -1

Query: 999 KPMKVSMSQNQTSWAATINSEVEAHIKQALTGRNPASVYHPMNHLIFEIPRSMAPALCIA 820
           KP  V MS  QT + A+++++VEAH+KQ +T + P  V+ PM+HLIF  P++  PALC+A
Sbjct: 33  KPTTVRMSMTQTPYWASLHADVEAHLKQTITIKEPLLVFEPMHHLIFTAPKTTVPALCLA 92

Query: 819 ACESVGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPKPKPMP--HHVYGANIELLTAD 646
           ACE VGG++ +AI+AASAL LM  +TYTHE+L LSD+P PKP P   HVYG N+ELLT D
Sbjct: 93  ACELVGGQRQEAISAASALLLMEAATYTHEHLPLSDRPGPKPGPMIDHVYGPNVELLTGD 152

Query: 645 SMVPFAYELLAAMDDPTNTNSDRILRVMIEIGRAVGS-QGMVNGQYLKVRCLGLDGDEPC 469
            +VPF +ELLA  D     NS+RIL+VM+EI RAVGS  G+++ QY+K    G DGDE C
Sbjct: 153 GIVPFGFELLARSDG--GENSERILKVMVEISRAVGSGGGVIDAQYMKTLGGGSDGDEIC 210

Query: 468 EKGMVDQVFEKKGGALYSXXXXXXXXXXXGTDEEIEKLRRYGLYVGMIHGIM 313
               + +V EK  G L+S           G +EEIE+LR++G YVG+I G++
Sbjct: 211 HVEEIRRVVEKYEGRLHSCGAVCGGVLGGGCEEEIERLRKFGFYVGIIQGMI 262


>dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 306

 Score =  222 bits (566), Expect = 1e-55
 Identities = 112/231 (48%), Positives = 160/231 (69%), Gaps = 1/231 (0%)
 Frame = -1

Query: 1002 YKPMKVSMSQNQTSWAATINSEVEAHIKQALTGRNPASVYHPMNHLIFEIPRSMAPALCI 823
            ++PM V+MS +Q+ W++ +N++++ H+KQA+  R P +V+ PM HLI   P++ APALCI
Sbjct: 30   HRPMVVAMSTDQSYWSS-VNADLDTHLKQAIPIRQPLAVFEPMRHLILSAPQTSAPALCI 88

Query: 822  AACESVGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPKPKPMPHH-VYGANIELLTAD 646
            AACE VGG ++QA+AAASAL L+H S  THE L L+D+P+P P     +YG NIELL AD
Sbjct: 89   AACELVGGHRNQAMAAASALRLVHASASTHENLPLTDRPRPMPRTRPTLYGPNIELLIAD 148

Query: 645  SMVPFAYELLAAMDDPTNTNSDRILRVMIEIGRAVGSQGMVNGQYLKVRCLGLDGDEPCE 466
             ++P+ +ELLA  DD    NS+R+LR +IEI RA+GSQG++ GQY + +    +G+E   
Sbjct: 149  GIIPYGFELLARDDDAAENNSNRVLRAIIEISRAMGSQGVIEGQYNESQYEESEGEEIFH 208

Query: 465  KGMVDQVFEKKGGALYSXXXXXXXXXXXGTDEEIEKLRRYGLYVGMIHGIM 313
             G +  V  KK G L++           G+++EIEKLRRYGLYVGM+ GI+
Sbjct: 209  VGWLQNVCRKKEGTLHACAGACGAILGGGSEDEIEKLRRYGLYVGMVQGIL 259


>ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
           gi|355518891|gb|AET00515.1| Geranylgeranyl pyrophosphate
           synthase [Medicago truncatula]
          Length = 297

 Score =  214 bits (545), Expect = 3e-53
 Identities = 112/230 (48%), Positives = 157/230 (68%), Gaps = 1/230 (0%)
 Frame = -1

Query: 999 KPMKVSMSQNQTSWAATINSEVEAHIKQALTGRNPASVYHPMNHLIFEIPRSMAPALCIA 820
           K   + MS  QT + A++++++EAH+KQ +T + P  V+ PM+HLIF  P++  PALC+A
Sbjct: 33  KSTTLRMSMTQTPYWASLHADIEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLA 92

Query: 819 ACESVGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPKPKPMPHHVYGANIELLTADSM 640
            CE VGG++ QAI+AASAL LM  +TYTHE+L L+D  +P+PM +HVYG N+ELLT D +
Sbjct: 93  TCELVGGQRHQAISAASALLLMEAATYTHEHLPLTD--RPRPMINHVYGPNMELLTGDGI 150

Query: 639 VPFAYELLAAMDDPTNTNSDRILRVMIEIGRAVGS-QGMVNGQYLKVRCLGLDGDEPCEK 463
           VPF +ELLA  D     NS+RIL+VM+EI RAVGS  G+++ QY K+   G DG+E C  
Sbjct: 151 VPFGFELLARSDG--GENSERILKVMVEISRAVGSGGGVIDAQYGKILYSGSDGEEKCHV 208

Query: 462 GMVDQVFEKKGGALYSXXXXXXXXXXXGTDEEIEKLRRYGLYVGMIHGIM 313
             +  V EK  G L+S           G +EEIE+LR++G YVG+I G++
Sbjct: 209 EEIRHVVEKYEGRLHSCGAVCGGVLGGGCEEEIERLRKFGYYVGIIQGMI 258


>gb|AFK47692.1| unknown [Medicago truncatula]
          Length = 297

 Score =  212 bits (539), Expect = 2e-52
 Identities = 111/230 (48%), Positives = 156/230 (67%), Gaps = 1/230 (0%)
 Frame = -1

Query: 999 KPMKVSMSQNQTSWAATINSEVEAHIKQALTGRNPASVYHPMNHLIFEIPRSMAPALCIA 820
           K   +  S  QT + A++++++EAH+KQ +T + P  V+ PM+HLIF  P++  PALC+A
Sbjct: 33  KSTTLRTSMTQTPYWASLHADIEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLA 92

Query: 819 ACESVGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPKPKPMPHHVYGANIELLTADSM 640
            CE VGG++ QAI+AASAL LM  +TYTHE+L L+D  +P+PM +HVYG N+ELLT D +
Sbjct: 93  TCEFVGGQRHQAISAASALLLMEAATYTHEHLPLTD--RPRPMINHVYGPNMELLTGDGI 150

Query: 639 VPFAYELLAAMDDPTNTNSDRILRVMIEIGRAVGS-QGMVNGQYLKVRCLGLDGDEPCEK 463
           VPF +ELLA  D     NS+RIL+VM+EI RAVGS  G+++ QY K+   G DG+E C  
Sbjct: 151 VPFGFELLARSDG--GENSERILKVMVEISRAVGSGGGVIDAQYGKILYSGSDGEEKCHV 208

Query: 462 GMVDQVFEKKGGALYSXXXXXXXXXXXGTDEEIEKLRRYGLYVGMIHGIM 313
             +  V EK  G L+S           G +EEIE+LR++G YVG+I G++
Sbjct: 209 EEIRHVVEKYEGRLHSCGAVCGGVLGGGCEEEIERLRKFGYYVGIIQGMI 258