BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001575
         (1318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   195   2e-47
ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   187   7e-45
ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   184   3e-44
ref|XP_004134707.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   184   4e-44
ref|XP_004134706.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   184   4e-44

>ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Vitis vinifera]
          Length = 253

 Score =  195 bits (496), Expect = 2e-47
 Identities = 114/254 (44%), Positives = 147/254 (57%), Gaps = 9/254 (3%)
 Frame = -1

Query: 1183 MGVNQCYEEIFSHDEMLDGDQSYLKE-KSAHDPATVPDNCKGCFDCNICLDYARDPVVTL 1007
            M + Q + E+ +  E  DGD S  K+ K+        +N  G FDCNICLD A DPVVTL
Sbjct: 1    MALEQDFPELAAQHES-DGDVSLQKKWKAISASEAASENSNGSFDCNICLDSAHDPVVTL 59

Query: 1006 CGHLYCWPCIYKWIYSHSTSATADHQQQQCPVCKADVLDNTLVPLYGRGQVSPDAEPNSK 827
            CGHLYCWPCIYKW++  STS   + QQQ CPVCKA++   +LVPLYGRG  SP      K
Sbjct: 60   CGHLYCWPCIYKWLHVQSTSPVTE-QQQNCPVCKANISHTSLVPLYGRGP-SPSESETKK 117

Query: 826  DSLDLEIPCRPPAHGVHALITT--------NPNQQLHTRPDSSQSQFESDHNQNHQYNAP 671
              +   IP RPPAHGVH LITT        +P++ LH  P  S SQ+       H Y   
Sbjct: 118  LHVGPAIPRRPPAHGVHTLITTTTSASLNSHPSRHLHPNPFQSHSQYFP-----HPYGGY 172

Query: 670  ANSVASPMLSLRGTTAHPMIWQFGDIVSTTVFRNPTEVGFFGYPSPYDQQLVGSSSPRAR 491
            A   A+P L+   +  +P I  FG++V + +F   ++   F YP P    L+ S++PR R
Sbjct: 173  A---ATPTLT---SVLNPTIGMFGEMVFSRMF-GSSDTSLFAYPYPNTYPLMASANPRMR 225

Query: 490  RQEMKDDESLNRIS 449
            RQEM+ D  LNR+S
Sbjct: 226  RQEMQLDRCLNRVS 239


>ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 232

 Score =  187 bits (474), Expect = 7e-45
 Identities = 100/219 (45%), Positives = 137/219 (62%)
 Frame = -1

Query: 1105 KSAHDPATVPDNCKGCFDCNICLDYARDPVVTLCGHLYCWPCIYKWIYSHSTSATADHQQ 926
            K+  + AT  +N  GCFDCNICLD+A +PVVTLCGHLYCWPCIYKW++  S S   D + 
Sbjct: 12   KTIPNAATETENSNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPD-EH 70

Query: 925  QQCPVCKADVLDNTLVPLYGRGQVSPDAEPNSKDSLDLEIPCRPPAHGVHALITTNPNQQ 746
             QCPVCKAD+ ++T+VPLYGRG  +         S D+ IP RP A  V AL+ T+  + 
Sbjct: 71   PQCPVCKADISNSTMVPLYGRGHAA--TAEGKTSSCDVFIPPRPSASCVQALLATSSQRG 128

Query: 745  LHTRPDSSQSQFESDHNQNHQYNAPANSVASPMLSLRGTTAHPMIWQFGDIVSTTVFRNP 566
             H      ++ ++  +  +H Y    +   S ML+L G+  HP+   FG++V   VF NP
Sbjct: 129  QHL---PYRNPYQGHYFSSHPYQ-EEDDATSQMLNL-GSHHHPVTGMFGEMVYARVFGNP 183

Query: 565  TEVGFFGYPSPYDQQLVGSSSPRARRQEMKDDESLNRIS 449
              +  + YP+ Y  QL+GS++PR RRQEM+  +SLNRIS
Sbjct: 184  ENL--YAYPNSY--QLMGSATPRLRRQEMQAHKSLNRIS 218


>ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 232

 Score =  184 bits (468), Expect = 3e-44
 Identities = 101/219 (46%), Positives = 136/219 (62%)
 Frame = -1

Query: 1105 KSAHDPATVPDNCKGCFDCNICLDYARDPVVTLCGHLYCWPCIYKWIYSHSTSATADHQQ 926
            K+  +  T  +N  GCFDCNICLD+A +PVVTLCGHLYCWPCIYKW++  S S   D + 
Sbjct: 12   KTIPNAVTEAENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSDSLPPD-EH 70

Query: 925  QQCPVCKADVLDNTLVPLYGRGQVSPDAEPNSKDSLDLEIPCRPPAHGVHALITTNPNQQ 746
             QCPVCKAD+ ++T+VPLYGRG  +  AE  +  S D+ IP RP A    AL+ T+   Q
Sbjct: 71   PQCPVCKADISNSTMVPLYGRGHAATTAEGKTA-SCDVFIPPRPSASCAQALLATSQRGQ 129

Query: 745  LHTRPDSSQSQFESDHNQNHQYNAPANSVASPMLSLRGTTAHPMIWQFGDIVSTTVFRNP 566
                 +  Q  + + H    + +A      S ML+L G+  HP+   FG++V   VF NP
Sbjct: 130  HLPYRNPYQGHYFTSHPYQEEDDA-----TSQMLNL-GSHHHPVTGMFGEMVYARVFGNP 183

Query: 565  TEVGFFGYPSPYDQQLVGSSSPRARRQEMKDDESLNRIS 449
              +  + YP+ Y  QL+GS++PR RRQEM+  +SLNRIS
Sbjct: 184  ENL--YAYPNSY--QLMGSATPRLRRQEMQAHKSLNRIS 218


>ref|XP_004134707.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 2 [Cucumis
            sativus] gi|449479350|ref|XP_004155576.1| PREDICTED: E3
            ubiquitin-protein ligase RMA1H1-like isoform 2 [Cucumis
            sativus]
          Length = 238

 Score =  184 bits (467), Expect = 4e-44
 Identities = 107/234 (45%), Positives = 136/234 (58%), Gaps = 9/234 (3%)
 Frame = -1

Query: 1123 QSYLKEKSAHDPATVPDNCKGCFDCNICLDYARDPVVTLCGHLYCWPCIYKWIYSHSTSA 944
            + Y  +   H   T  +N KGCFDCNICLD+A +PVVTLCGHLYCWPCIYKW++  S S 
Sbjct: 4    EQYFAQGWKHVSGTERENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASL 63

Query: 943  TADHQQQQCPVCKADVLDNTLVPLYGRGQVSPDAEPNSKD-SLDLEIPCRPPAHGVHALI 767
              D +  QCPVCKAD+   T+VPLYGRGQ + + EP  K    D+ IP RP A G   L 
Sbjct: 64   AID-EHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHDINIPPRPSACGNQILA 122

Query: 766  TTNPNQQLHTRPDSSQSQFESDHNQ-NHQYNAPAN---SVASPMLSLRGTT----AHPMI 611
            T + +QQ        Q  + + + + NH     AN     ASP+L+L  T+     HP++
Sbjct: 123  TPSTHQQ--------QLPYRNPYQRPNHDPLLFANYEEDSASPLLNLARTSFSSFHHPVV 174

Query: 610  WQFGDIVSTTVFRNPTEVGFFGYPSPYDQQLVGSSSPRARRQEMKDDESLNRIS 449
               GD V   VF N   +  + Y + Y  QL GSS  R RRQEM+ D+SLNRIS
Sbjct: 175  GMIGDFVHARVFGNSDNL--YSYRNSY--QLTGSSRNRLRRQEMQVDKSLNRIS 224


>ref|XP_004134706.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 1 [Cucumis
            sativus] gi|449479346|ref|XP_004155575.1| PREDICTED: E3
            ubiquitin-protein ligase RMA1H1-like isoform 1 [Cucumis
            sativus]
          Length = 257

 Score =  184 bits (467), Expect = 4e-44
 Identities = 107/234 (45%), Positives = 136/234 (58%), Gaps = 9/234 (3%)
 Frame = -1

Query: 1123 QSYLKEKSAHDPATVPDNCKGCFDCNICLDYARDPVVTLCGHLYCWPCIYKWIYSHSTSA 944
            + Y  +   H   T  +N KGCFDCNICLD+A +PVVTLCGHLYCWPCIYKW++  S S 
Sbjct: 23   EQYFAQGWKHVSGTERENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASL 82

Query: 943  TADHQQQQCPVCKADVLDNTLVPLYGRGQVSPDAEPNSKD-SLDLEIPCRPPAHGVHALI 767
              D +  QCPVCKAD+   T+VPLYGRGQ + + EP  K    D+ IP RP A G   L 
Sbjct: 83   AID-EHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHDINIPPRPSACGNQILA 141

Query: 766  TTNPNQQLHTRPDSSQSQFESDHNQ-NHQYNAPAN---SVASPMLSLRGTT----AHPMI 611
            T + +QQ        Q  + + + + NH     AN     ASP+L+L  T+     HP++
Sbjct: 142  TPSTHQQ--------QLPYRNPYQRPNHDPLLFANYEEDSASPLLNLARTSFSSFHHPVV 193

Query: 610  WQFGDIVSTTVFRNPTEVGFFGYPSPYDQQLVGSSSPRARRQEMKDDESLNRIS 449
               GD V   VF N   +  + Y + Y  QL GSS  R RRQEM+ D+SLNRIS
Sbjct: 194  GMIGDFVHARVFGNSDNL--YSYRNSY--QLTGSSRNRLRRQEMQVDKSLNRIS 243