BLASTX nr result

ID: Coptis24_contig00001571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001571
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513896.1| Endoplasmic reticulum-Golgi intermediate com...   385   e-105
ref|XP_002306582.1| predicted protein [Populus trichocarpa] gi|2...   384   e-104
ref|XP_002285801.1| PREDICTED: endoplasmic reticulum-Golgi inter...   383   e-104
ref|XP_003544786.1| PREDICTED: endoplasmic reticulum-Golgi inter...   381   e-104
ref|XP_003542443.1| PREDICTED: endoplasmic reticulum-Golgi inter...   381   e-104

>ref|XP_002513896.1| Endoplasmic reticulum-Golgi intermediate compartment protein,
           putative [Ricinus communis] gi|223546982|gb|EEF48479.1|
           Endoplasmic reticulum-Golgi intermediate compartment
           protein, putative [Ricinus communis]
          Length = 386

 Score =  385 bits (988), Expect = e-105
 Identities = 175/236 (74%), Positives = 204/236 (86%), Gaps = 1/236 (0%)
 Frame = +1

Query: 1   GIGGPKIERPLQKHGGRLDHNETYCGSCFGAEVADDECCNSCEEVREAYRKKGWAITNPD 180
           GIG PKIE PLQ+HGGRL+HNETYCGSC+GAE +D++CCNSCE+VREAYRKKGWA++NPD
Sbjct: 122 GIGAPKIENPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGWALSNPD 181

Query: 181 MIDQCKREGFIDRVKEEDGEGCSIEGFLEVNKVAGSFHFAPAKHFFQSNIHLFDLMALQT 360
           +IDQCKREGF+ R+K+E+GEGC+I GFLEVNKVAG+FHFAP K F QSN+H+ DL+A Q 
Sbjct: 182 LIDQCKREGFLQRIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSNVHVHDLLAFQK 241

Query: 361 EKSNISHRINKLSFGQKFPGVVNPLDGVQWTQQESSGMYQYFIKVVPTIYTDIRRRKINS 540
           +  NISH+IN+L+FG  FPGVVNPLDGV WTQ+  SGMYQYFIKVVPT+YTD+    I S
Sbjct: 242 DSFNISHKINRLAFGDYFPGVVNPLDGVHWTQETPSGMYQYFIKVVPTVYTDVSGYTIQS 301

Query: 541 NQFSVTEHFRSQEV-YTQSIPGVFFFYDFSPIKVSFSEETVPLLHFLTNVCAIVGG 705
           NQFSVTEHFRS E    QS+PGVFFFYD SPIKV+F+EE V  LHFLTNVCAIVGG
Sbjct: 302 NQFSVTEHFRSAEAGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGG 357


>ref|XP_002306582.1| predicted protein [Populus trichocarpa] gi|222856031|gb|EEE93578.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score =  384 bits (985), Expect = e-104
 Identities = 171/236 (72%), Positives = 206/236 (87%), Gaps = 1/236 (0%)
 Frame = +1

Query: 1   GIGGPKIERPLQKHGGRLDHNETYCGSCFGAEVADDECCNSCEEVREAYRKKGWAITNPD 180
           GIG PKIE+PLQ+HGGRL+HNETYCGSC+GAE +D++CCNSCE+VREAYRKKGWA+TNPD
Sbjct: 122 GIGAPKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGWAVTNPD 181

Query: 181 MIDQCKREGFIDRVKEEDGEGCSIEGFLEVNKVAGSFHFAPAKHFFQSNIHLFDLMALQT 360
           ++DQCKREGF+ ++K+E+GEGC+I GFLEVNKVAG+FHFAP K F QS +H+ DL+A Q 
Sbjct: 182 LMDQCKREGFLQKIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQK 241

Query: 361 EKSNISHRINKLSFGQKFPGVVNPLDGVQWTQQESSGMYQYFIKVVPTIYTDIRRRKINS 540
           +  NI+H+IN+L+FG+ FPGVVNPLDGVQWTQ+  SGMYQYFIKVVPT+YTD+    I S
Sbjct: 242 DSFNITHKINRLTFGEYFPGVVNPLDGVQWTQETPSGMYQYFIKVVPTVYTDVSGHTIQS 301

Query: 541 NQFSVTEHFRSQEV-YTQSIPGVFFFYDFSPIKVSFSEETVPLLHFLTNVCAIVGG 705
           NQFSVTEHFR  ++   QS+PGVFFFYD SPIKV+F+EE V  LHFLTNVCAIVGG
Sbjct: 302 NQFSVTEHFRGTDIGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGG 357


>ref|XP_002285801.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
           protein 3 [Vitis vinifera] gi|302141938|emb|CBI19141.3|
           unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  383 bits (984), Expect = e-104
 Identities = 175/236 (74%), Positives = 205/236 (86%), Gaps = 1/236 (0%)
 Frame = +1

Query: 1   GIGGPKIERPLQKHGGRLDHNETYCGSCFGAEVADDECCNSCEEVREAYRKKGWAITNPD 180
           GIG PKIE+PLQKHGGRL+HNETYCGSC+GAE +DD+CCN+CEEVREAYRKKGWA++NPD
Sbjct: 122 GIGSPKIEKPLQKHGGRLEHNETYCGSCYGAEASDDDCCNNCEEVREAYRKKGWAMSNPD 181

Query: 181 MIDQCKREGFIDRVKEEDGEGCSIEGFLEVNKVAGSFHFAPAKHFFQSNIHLFDLMALQT 360
           +IDQCKREGF+ R+K+E+GEGC+I GFLEVNKVAG+FHFAP K F QSNIH+ DL+A Q 
Sbjct: 182 LIDQCKREGFLQRIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSNIHVHDLLAFQK 241

Query: 361 EKSNISHRINKLSFGQKFPGVVNPLDGVQWTQQESSGMYQYFIKVVPTIYTDIRRRKINS 540
           +  NISH+IN+L+FG  FPGVVNPLDGVQW Q   SGMYQYFIKVVPT+YT +    I++
Sbjct: 242 DSFNISHKINRLAFGDYFPGVVNPLDGVQWIQATPSGMYQYFIKVVPTVYTHVSGHTIST 301

Query: 541 NQFSVTEHFRSQEV-YTQSIPGVFFFYDFSPIKVSFSEETVPLLHFLTNVCAIVGG 705
           NQFSVTEHFR+ E+   QS+PGVFFFYD SPIKV+F+EE V  LHFLTNVCAIVGG
Sbjct: 302 NQFSVTEHFRNAELGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGG 357


>ref|XP_003544786.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
           protein 3-like [Glycine max]
          Length = 386

 Score =  381 bits (978), Expect = e-104
 Identities = 171/236 (72%), Positives = 204/236 (86%), Gaps = 1/236 (0%)
 Frame = +1

Query: 1   GIGGPKIERPLQKHGGRLDHNETYCGSCFGAEVADDECCNSCEEVREAYRKKGWAITNPD 180
           GIG PKIE+PLQ+HGGRL+HNETYCGSC+GAE +DD+CCNSCE+VREAYRKKGWA++NPD
Sbjct: 122 GIGAPKIEKPLQRHGGRLEHNETYCGSCYGAEESDDDCCNSCEDVREAYRKKGWALSNPD 181

Query: 181 MIDQCKREGFIDRVKEEDGEGCSIEGFLEVNKVAGSFHFAPAKHFFQSNIHLFDLMALQT 360
           +IDQCKREGF+ R+K+E+GEGC++ GFLEVNKVAG+FHFAP K F QS +H+ DL+A Q 
Sbjct: 182 LIDQCKREGFLQRIKDEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQK 241

Query: 361 EKSNISHRINKLSFGQKFPGVVNPLDGVQWTQQESSGMYQYFIKVVPTIYTDIRRRKINS 540
           +  N+SH IN+L+FG+ FPGVVNPLD V WTQ+  SGMYQYFIKVVPT+YTD+    I S
Sbjct: 242 DSFNLSHHINRLAFGEYFPGVVNPLDNVHWTQETPSGMYQYFIKVVPTVYTDVSGHTIQS 301

Query: 541 NQFSVTEHFRSQEV-YTQSIPGVFFFYDFSPIKVSFSEETVPLLHFLTNVCAIVGG 705
           NQFSVTEHFR+ +V   QS+PGVFFFYD SPIKV+F+EE V  LHFLTNVCAIVGG
Sbjct: 302 NQFSVTEHFRTGDVGRLQSLPGVFFFYDLSPIKVTFTEENVSFLHFLTNVCAIVGG 357


>ref|XP_003542443.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
           protein 3-like [Glycine max]
          Length = 386

 Score =  381 bits (978), Expect = e-104
 Identities = 170/236 (72%), Positives = 205/236 (86%), Gaps = 1/236 (0%)
 Frame = +1

Query: 1   GIGGPKIERPLQKHGGRLDHNETYCGSCFGAEVADDECCNSCEEVREAYRKKGWAITNPD 180
           GIG PKIE+PLQ+HGGRL+HNETYCGSC+G+EV+DD+CCNSCE+VREAYRKKGWA++NPD
Sbjct: 122 GIGAPKIEKPLQRHGGRLEHNETYCGSCYGSEVSDDDCCNSCEDVREAYRKKGWALSNPD 181

Query: 181 MIDQCKREGFIDRVKEEDGEGCSIEGFLEVNKVAGSFHFAPAKHFFQSNIHLFDLMALQT 360
           +IDQCKREGF+ R+K+E+GEGC++ GFLEVNKVAG+FHFAP K F QS +H+ DL+A Q 
Sbjct: 182 LIDQCKREGFLQRIKDEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQK 241

Query: 361 EKSNISHRINKLSFGQKFPGVVNPLDGVQWTQQESSGMYQYFIKVVPTIYTDIRRRKINS 540
           +  N+SH IN+L+FG+ FPGVVNPLD V WTQ+  SGMYQYFIKVVPT+YTD+    I S
Sbjct: 242 DSFNLSHHINRLTFGEYFPGVVNPLDNVHWTQETPSGMYQYFIKVVPTVYTDVSGHTIQS 301

Query: 541 NQFSVTEHFRSQEV-YTQSIPGVFFFYDFSPIKVSFSEETVPLLHFLTNVCAIVGG 705
           NQFSVTEHFR+ ++   QS+PGVFFFYD SPIKV+F+EE V  LHFLTNVCAIVGG
Sbjct: 302 NQFSVTEHFRTGDMGRLQSLPGVFFFYDLSPIKVTFTEENVSFLHFLTNVCAIVGG 357


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