BLASTX nr result
ID: Coptis24_contig00001568
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00001568 (858 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI23666.3| unnamed protein product [Vitis vinifera] 220 3e-55 emb|CBI25584.3| unnamed protein product [Vitis vinifera] 219 5e-55 ref|XP_002285313.1| PREDICTED: 60S ribosomal protein L14-2-like ... 217 3e-54 ref|XP_002267370.1| PREDICTED: 60S ribosomal protein L14-2-like ... 216 5e-54 gb|ABA40467.1| glycoprotein-like protein [Solanum tuberosum] 216 7e-54 >emb|CBI23666.3| unnamed protein product [Vitis vinifera] Length = 220 Score = 220 bits (561), Expect = 3e-55 Identities = 117/159 (73%), Positives = 125/159 (78%), Gaps = 7/159 (4%) Frame = +3 Query: 24 LSPQKP*NPLHS-------YSLQHSKMPFKRYVEIGRVALVNYGKDYGQXXXXXXXXXQN 182 LSP P PL S S + MPFKRYVE+GRVALVNYGKDYG+ QN Sbjct: 61 LSPVSPSTPLASSIFPLPAVSRALANMPFKRYVEVGRVALVNYGKDYGRLVVIVDVIDQN 120 Query: 183 RALVDAPDMVRSQMNFKRLSLTDIKIDIPRVPKKKSLIQAMEAADVKNKWEKSSWGRKLI 362 RALVDAPDMVR QMNFKRLSLTDIKIDI RVPKKK+LI+AM AADVKNKWE SSWGRKLI Sbjct: 121 RALVDAPDMVRCQMNFKRLSLTDIKIDIKRVPKKKTLIEAMTAADVKNKWENSSWGRKLI 180 Query: 363 VQKRRVSLNDFDRFKLMVAKIKRASAIRQELAKLKKQSA 479 VQKRR SLNDFDRFK+M+AKIKR IRQELAKLKKQ+A Sbjct: 181 VQKRRASLNDFDRFKIMLAKIKRGGVIRQELAKLKKQTA 219 >emb|CBI25584.3| unnamed protein product [Vitis vinifera] Length = 179 Score = 219 bits (559), Expect = 5e-55 Identities = 112/143 (78%), Positives = 121/143 (84%) Frame = +3 Query: 51 LHSYSLQHSKMPFKRYVEIGRVALVNYGKDYGQXXXXXXXXXQNRALVDAPDMVRSQMNF 230 L + S +KMPFKRYVEIGRVALVNYGK+YG+ QNRALVDAPDMVR QMNF Sbjct: 36 LSALSHAQAKMPFKRYVEIGRVALVNYGKEYGRLVVIVDVIDQNRALVDAPDMVRCQMNF 95 Query: 231 KRLSLTDIKIDIPRVPKKKSLIQAMEAADVKNKWEKSSWGRKLIVQKRRVSLNDFDRFKL 410 KRLSLTDIKIDI RVPKKK+LI+AM AADVKNKWE SSWGRKLIVQKRR SLNDFDRFK+ Sbjct: 96 KRLSLTDIKIDIKRVPKKKTLIEAMNAADVKNKWENSSWGRKLIVQKRRASLNDFDRFKI 155 Query: 411 MVAKIKRASAIRQELAKLKKQSA 479 M+AKIKR IRQELAKLKKQ+A Sbjct: 156 MLAKIKRGGVIRQELAKLKKQTA 178 >ref|XP_002285313.1| PREDICTED: 60S ribosomal protein L14-2-like [Vitis vinifera] Length = 134 Score = 217 bits (552), Expect = 3e-54 Identities = 109/133 (81%), Positives = 116/133 (87%) Frame = +3 Query: 81 MPFKRYVEIGRVALVNYGKDYGQXXXXXXXXXQNRALVDAPDMVRSQMNFKRLSLTDIKI 260 MPFKRYVE+GRVALVNYGKDYG+ QNRALVDAPDMVR QMNFKRLSLTDIKI Sbjct: 1 MPFKRYVEVGRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVRCQMNFKRLSLTDIKI 60 Query: 261 DIPRVPKKKSLIQAMEAADVKNKWEKSSWGRKLIVQKRRVSLNDFDRFKLMVAKIKRASA 440 DI RVPKKK+LI+AM AADVKNKWE SSWGRKLIVQKRR SLNDFDRFK+M+AKIKR Sbjct: 61 DIKRVPKKKTLIEAMTAADVKNKWENSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRGGV 120 Query: 441 IRQELAKLKKQSA 479 IRQELAKLKKQ+A Sbjct: 121 IRQELAKLKKQTA 133 >ref|XP_002267370.1| PREDICTED: 60S ribosomal protein L14-2-like [Vitis vinifera] Length = 134 Score = 216 bits (550), Expect = 5e-54 Identities = 109/133 (81%), Positives = 116/133 (87%) Frame = +3 Query: 81 MPFKRYVEIGRVALVNYGKDYGQXXXXXXXXXQNRALVDAPDMVRSQMNFKRLSLTDIKI 260 MPFKRYVEIGRVALVNYGK+YG+ QNRALVDAPDMVR QMNFKRLSLTDIKI Sbjct: 1 MPFKRYVEIGRVALVNYGKEYGRLVVIVDVIDQNRALVDAPDMVRCQMNFKRLSLTDIKI 60 Query: 261 DIPRVPKKKSLIQAMEAADVKNKWEKSSWGRKLIVQKRRVSLNDFDRFKLMVAKIKRASA 440 DI RVPKKK+LI+AM AADVKNKWE SSWGRKLIVQKRR SLNDFDRFK+M+AKIKR Sbjct: 61 DIKRVPKKKTLIEAMNAADVKNKWENSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRGGV 120 Query: 441 IRQELAKLKKQSA 479 IRQELAKLKKQ+A Sbjct: 121 IRQELAKLKKQTA 133 >gb|ABA40467.1| glycoprotein-like protein [Solanum tuberosum] Length = 134 Score = 216 bits (549), Expect = 7e-54 Identities = 109/133 (81%), Positives = 116/133 (87%) Frame = +3 Query: 81 MPFKRYVEIGRVALVNYGKDYGQXXXXXXXXXQNRALVDAPDMVRSQMNFKRLSLTDIKI 260 MPFKR+VEIGRVALVNYGKDYG+ QNRALVDAPDMVRSQMNFKRLSLTDIKI Sbjct: 1 MPFKRFVEIGRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60 Query: 261 DIPRVPKKKSLIQAMEAADVKNKWEKSSWGRKLIVQKRRVSLNDFDRFKLMVAKIKRASA 440 DI R+PKKK+LI AMEAADVK KWE SSWGRKLIVQKRR SLNDFDRFKLM+AKIKRA Sbjct: 61 DIKRIPKKKTLIAAMEAADVKTKWESSSWGRKLIVQKRRASLNDFDRFKLMLAKIKRAGV 120 Query: 441 IRQELAKLKKQSA 479 +RQELAKLKK+ A Sbjct: 121 VRQELAKLKKEVA 133