BLASTX nr result

ID: Coptis24_contig00001561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001561
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADA79524.1| chloroplast acyl-ACP thioesterase [Macadamia tetr...    96   3e-37
gb|AEX99667.1| acyl-ACP-thioesterase B [Citrus sinensis]               85   5e-34
gb|ABU96744.1| chloroplast acyl-ACP thioesterase [Jatropha curca...    84   2e-33
sp|Q9SQI3.1|FATB_GOSHI RecName: Full=Palmitoyl-acyl carrier prot...    83   1e-32
gb|AAD01982.1| palmitoyl-acyl carrier protein thioesterase [Goss...    83   1e-32

>gb|ADA79524.1| chloroplast acyl-ACP thioesterase [Macadamia tetraphylla]
          Length = 416

 Score = 95.9 bits (237), Expect(2) = 3e-37
 Identities = 59/93 (63%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
 Frame = -1

Query: 461 SSTKAAMK--GGSDNLETRGINSSKPASLSGGLKVKANAQASPKINGTITYPPAK--NEE 294
           SS K +M   GGSDNL+++GI S K AS SGGL VK NAQA PKINGT      +   +E
Sbjct: 17  SSGKKSMVLGGGSDNLDSQGIKS-KFASSSGGLHVKTNAQAPPKINGTSVGLATEVLKKE 75

Query: 293 MSTSSVPARTFINQLPDWSVLLTAITAMFLAAE 195
            +TSS P RTFINQLPDWSVLL AIT +FLAAE
Sbjct: 76  DATSSPPPRTFINQLPDWSVLLAAITTIFLAAE 108



 Score = 84.7 bits (208), Expect(2) = 3e-37
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = -3

Query: 126 WTLLDWKPRRSDMLVDPFGLGKIVQDGLVFQQNFSIRSYEIG 1
           WTL+DWKPRR DMLVDPFGLG+IV+DGLVF QNFSIRSYEIG
Sbjct: 111 WTLIDWKPRRPDMLVDPFGLGRIVEDGLVFSQNFSIRSYEIG 152


>gb|AEX99667.1| acyl-ACP-thioesterase B [Citrus sinensis]
          Length = 418

 Score = 85.1 bits (209), Expect(2) = 5e-34
 Identities = 49/82 (59%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
 Frame = -1

Query: 425 NLETRGINSSKPASLSGGLKVKANAQASPKINGT---ITYPPA--KNEEMSTSSVPARTF 261
           NL +  +   K  S SG L+VKANAQA  KINGT   +T P    KN ++STSS P RTF
Sbjct: 26  NLGSANLGGIKSKSSSGSLQVKANAQAPSKINGTSVGLTTPAESLKNGDISTSSPPPRTF 85

Query: 260 INQLPDWSVLLTAITAMFLAAE 195
           INQLPDWS+LL AIT +FLAAE
Sbjct: 86  INQLPDWSMLLAAITTIFLAAE 107



 Score = 84.3 bits (207), Expect(2) = 5e-34
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = -3

Query: 126 WTLLDWKPRRSDMLVDPFGLGKIVQDGLVFQQNFSIRSYEIG 1
           W +LDWKPRRSDMLVDPFG+GKIVQDG +F+QNFSIRSYEIG
Sbjct: 110 WMMLDWKPRRSDMLVDPFGIGKIVQDGFIFRQNFSIRSYEIG 151


>gb|ABU96744.1| chloroplast acyl-ACP thioesterase [Jatropha curcas]
           gi|248570279|gb|ACT09366.1| stearoyl
           acyl-ACP-thioesterase [Jatropha curcas]
          Length = 418

 Score = 84.3 bits (207), Expect(2) = 2e-33
 Identities = 55/94 (58%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
 Frame = -1

Query: 461 SSTKAAMKGGSDNLETRGINSSKPASLSGGLKVKANAQASPKING-----TITYPPAKNE 297
           S+   + K GS +    GI S KPAS SGGL+VKANAQA PKING     T      KNE
Sbjct: 17  SADSKSTKIGSGSASLGGIKS-KPAS-SGGLQVKANAQAPPKINGSTVGYTTPVDSVKNE 74

Query: 296 EMSTSSVPARTFINQLPDWSVLLTAITAMFLAAE 195
              T S P RTFINQLPDWS+LL AIT +FLAAE
Sbjct: 75  G-DTPSPPPRTFINQLPDWSMLLAAITTIFLAAE 107



 Score = 83.6 bits (205), Expect(2) = 2e-33
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = -3

Query: 126 WTLLDWKPRRSDMLVDPFGLGKIVQDGLVFQQNFSIRSYEIG 1
           W +LDWKPRR DML+DPFGLG+IVQDGLVF+QNFSIRSYEIG
Sbjct: 110 WMMLDWKPRRPDMLIDPFGLGRIVQDGLVFRQNFSIRSYEIG 151


>sp|Q9SQI3.1|FATB_GOSHI RecName: Full=Palmitoyl-acyl carrier protein thioesterase,
           chloroplastic; AltName: Full=16:0-acyl-carrier protein
           thioesterase; Short=16:0-ACP thioesterase; AltName:
           Full=Acyl-[acyl-carrier-protein] hydrolase; AltName:
           Full=PATE; Flags: Precursor
           gi|6048397|gb|AAF02215.1|AF076535_1 palmitoyl-acyl
           carrier protein thioesterase [Gossypium hirsutum]
          Length = 413

 Score = 82.8 bits (203), Expect(2) = 1e-32
 Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
 Frame = -1

Query: 410 GINSSKPASLSGGLKVKANAQASPKINGTI--TYPP--AKNEEMSTSSVPARTFINQLPD 243
           G   SKP+  SG L+VKANAQA PKINGT+  T P   +KN++   SS P RTFINQLPD
Sbjct: 28  GSIKSKPSVSSGSLQVKANAQAPPKINGTVASTTPVEGSKNDD-GASSPPPRTFINQLPD 86

Query: 242 WSVLLTAITAMFLAAE 195
           WS+LL AIT +FLAAE
Sbjct: 87  WSMLLAAITTIFLAAE 102



 Score = 82.4 bits (202), Expect(2) = 1e-32
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = -3

Query: 126 WTLLDWKPRRSDMLVDPFGLGKIVQDGLVFQQNFSIRSYEIG 1
           W +LDWKPRR DM++DPFG+GKIVQDGLVF QNFSIRSYEIG
Sbjct: 105 WMMLDWKPRRPDMVIDPFGIGKIVQDGLVFSQNFSIRSYEIG 146


>gb|AAD01982.1| palmitoyl-acyl carrier protein thioesterase [Gossypium hirsutum]
          Length = 410

 Score = 82.8 bits (203), Expect(2) = 1e-32
 Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
 Frame = -1

Query: 410 GINSSKPASLSGGLKVKANAQASPKINGTI--TYPP--AKNEEMSTSSVPARTFINQLPD 243
           G   SKP+  SG L+VKANAQA PKINGT+  T P   +KN++   SS P RTFINQLPD
Sbjct: 25  GSIKSKPSVSSGSLQVKANAQAPPKINGTVASTTPVEGSKNDD-GASSPPPRTFINQLPD 83

Query: 242 WSVLLTAITAMFLAAE 195
           WS+LL AIT +FLAAE
Sbjct: 84  WSMLLAAITTIFLAAE 99



 Score = 82.4 bits (202), Expect(2) = 1e-32
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = -3

Query: 126 WTLLDWKPRRSDMLVDPFGLGKIVQDGLVFQQNFSIRSYEIG 1
           W +LDWKPRR DM++DPFG+GKIVQDGLVF QNFSIRSYEIG
Sbjct: 102 WMMLDWKPRRPDMVIDPFGIGKIVQDGLVFSQNFSIRSYEIG 143


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