BLASTX nr result

ID: Coptis24_contig00001557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001557
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280187.1| PREDICTED: uncharacterized protein LOC100260...   155   2e-35
ref|XP_002279465.1| PREDICTED: uncharacterized protein LOC100266...   155   2e-35
emb|CAN64035.1| hypothetical protein VITISV_020002 [Vitis vinifera]   150   7e-34
ref|XP_002311204.1| predicted protein [Populus trichocarpa] gi|2...   145   2e-32
gb|ABK92946.1| unknown [Populus trichocarpa]                          145   2e-32

>ref|XP_002280187.1| PREDICTED: uncharacterized protein LOC100260337 [Vitis vinifera]
           gi|297745939|emb|CBI15995.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  155 bits (393), Expect = 2e-35
 Identities = 75/133 (56%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
 Frame = +3

Query: 150 LDLDITIITAKHLKNVNWRHGELKPYVTISIDPTRRFTTKPSDDINTNRPIWNERFIIPI 329
           +DLD+TI++AKHLKNVNWR+G+LKPY    +DP RRF TKP DD  + RP+WNE F IPI
Sbjct: 18  MDLDVTIVSAKHLKNVNWRNGDLKPYAIFWVDPERRFATKP-DDCGSTRPVWNEHFSIPI 76

Query: 330 NIPLHDAXXXXXXXXXXXXQTPSLKP-VGSVQFPLKELISNSDESNTIRVLELRRPSGRP 506
           N P +D+            +TP  KP VG ++FP+K+L+ + + +N+IR LELRRPSGRP
Sbjct: 77  NTPPYDSVFTLEIFHSKPSETP--KPLVGVLRFPIKDLVDSDESANSIRTLELRRPSGRP 134

Query: 507 QGKIRVKLGLRER 545
            GKIR+KL LRER
Sbjct: 135 NGKIRIKLALRER 147


>ref|XP_002279465.1| PREDICTED: uncharacterized protein LOC100266706 [Vitis vinifera]
          Length = 267

 Score =  155 bits (392), Expect = 2e-35
 Identities = 75/134 (55%), Positives = 99/134 (73%), Gaps = 1/134 (0%)
 Frame = +3

Query: 147 PLDLDITIITAKHLKNVNWRHGELKPYVTISIDPTRRFTTKPSDDINTNRPIWNERFIIP 326
           PLD+D+T+++AKHL+NVNW+HGELKPY    +DP RR  TKP D+  +  P+WNERF + 
Sbjct: 6   PLDIDLTVVSAKHLQNVNWKHGELKPYAIFWVDPDRRLATKP-DESGSTCPVWNERFTVS 64

Query: 327 INIPLHDAXXXXXXXXXXXXQTPSLKP-VGSVQFPLKELISNSDESNTIRVLELRRPSGR 503
           +N+PLHD+            +TP  KP VGS+Q PLK+L+ +SD+SN I+  +LRRPSGR
Sbjct: 65  VNLPLHDSVLTLEVFHSKPSETP--KPLVGSLQVPLKDLV-DSDDSNRIKTFQLRRPSGR 121

Query: 504 PQGKIRVKLGLRER 545
           PQGKIRVKL +RER
Sbjct: 122 PQGKIRVKLAIRER 135


>emb|CAN64035.1| hypothetical protein VITISV_020002 [Vitis vinifera]
          Length = 239

 Score =  150 bits (379), Expect = 7e-34
 Identities = 75/134 (55%), Positives = 96/134 (71%), Gaps = 1/134 (0%)
 Frame = +3

Query: 147 PLDLDITIITAKHLKNVNWRHGELKPYVTISIDPTRRFTTKPSDDINTNRPIWNERFIIP 326
           PLD+DIT+++AKHLKNVNW+HGELKPY    +DP RR  TKP D+  +  P+WNERF + 
Sbjct: 6   PLDIDITVVSAKHLKNVNWKHGELKPYAIFWVDPDRRLATKP-DESGSTCPVWNERFTLS 64

Query: 327 INIPLHDAXXXXXXXXXXXXQTPSLKP-VGSVQFPLKELISNSDESNTIRVLELRRPSGR 503
           +N+PLHD+            +TP  KP VGS+Q  LK+L  +SD+SN I+  +LRRPSGR
Sbjct: 65  VNLPLHDSVLTLEVFHSKPSETP--KPLVGSLQVXLKDL-XDSDDSNXIKTFQLRRPSGR 121

Query: 504 PQGKIRVKLGLRER 545
           PQGKIRVKL +R R
Sbjct: 122 PQGKIRVKLAIRXR 135


>ref|XP_002311204.1| predicted protein [Populus trichocarpa] gi|222851024|gb|EEE88571.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  145 bits (366), Expect = 2e-32
 Identities = 74/134 (55%), Positives = 97/134 (72%), Gaps = 1/134 (0%)
 Frame = +3

Query: 147 PLDLDITIITAKHLKNVNWRHGELKPYVTISIDPTRRFTTKPSDDINTNRPIWNERFIIP 326
           PLDLD+TII+AKHLKNVNW+ G+LKPY    +DP+RR +TK SD+  + RP+WNERF +P
Sbjct: 11  PLDLDLTIISAKHLKNVNWKTGDLKPYAVFWVDPSRRLSTK-SDESGSTRPVWNERFTLP 69

Query: 327 INIPLHDAXXXXXXXXXXXXQTPSLKP-VGSVQFPLKELISNSDESNTIRVLELRRPSGR 503
           +   L D+            +TP  KP VG+++  LK+L S+ D+SN +R LEL RPSGR
Sbjct: 70  LTFALRDSFLTLEIFHSKPSETP--KPLVGTLRVALKDL-SDPDDSNRVRTLELTRPSGR 126

Query: 504 PQGKIRVKLGLRER 545
           PQGKIR+KLG+RER
Sbjct: 127 PQGKIRIKLGVRER 140


>gb|ABK92946.1| unknown [Populus trichocarpa]
          Length = 311

 Score =  145 bits (366), Expect = 2e-32
 Identities = 74/134 (55%), Positives = 97/134 (72%), Gaps = 1/134 (0%)
 Frame = +3

Query: 147 PLDLDITIITAKHLKNVNWRHGELKPYVTISIDPTRRFTTKPSDDINTNRPIWNERFIIP 326
           PLDLD+TII+AKHLKNVNW+ G+LKPY    +DP+RR +TK SD+  + RP+WNERF +P
Sbjct: 11  PLDLDLTIISAKHLKNVNWKTGDLKPYAVFWVDPSRRLSTK-SDESGSTRPVWNERFTLP 69

Query: 327 INIPLHDAXXXXXXXXXXXXQTPSLKP-VGSVQFPLKELISNSDESNTIRVLELRRPSGR 503
           +   L D+            +TP  KP VG+++  LK+L S+ D+SN +R LEL RPSGR
Sbjct: 70  LTFALRDSFLTLEIFHSKPSETP--KPLVGTLRVALKDL-SDPDDSNRVRTLELTRPSGR 126

Query: 504 PQGKIRVKLGLRER 545
           PQGKIR+KLG+RER
Sbjct: 127 PQGKIRIKLGVRER 140


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