BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001556
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC10953.1| ubiquitin-like protein [Camellia sinensis]             117   7e-24
gb|ABA96452.1| GRF zinc finger family protein [Oryza sativa Japo...   116   9e-24
gb|AFK38458.1| unknown [Lotus japonicus]                              116   9e-24
gb|ABR25610.1| ubiquitin-like protein 5 [Oryza sativa Indica Group]   116   9e-24
ref|NP_001047489.1| Os02g0628800 [Oryza sativa Japonica Group] g...   116   1e-23

>gb|AEC10953.1| ubiquitin-like protein [Camellia sinensis]
          Length = 73

 Score =  117 bits (292), Expect = 7e-24
 Identities = 56/57 (98%), Positives = 57/57 (100%)
 Frame = +2

Query: 47  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNVYKDHITL 217
           MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRADKIRIQKWYNVYKDHITL
Sbjct: 1   MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRADKIRIQKWYNVYKDHITL 57


>gb|ABA96452.1| GRF zinc finger family protein [Oryza sativa Japonica Group]
          Length = 278

 Score =  116 bits (291), Expect = 9e-24
 Identities = 55/62 (88%), Positives = 58/62 (93%)
 Frame = +2

Query: 32  QNSTKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNVYKDHI 211
           +   KMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR +KIRIQKWYN+YKDHI
Sbjct: 201 EEEEKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYNIYKDHI 260

Query: 212 TL 217
           TL
Sbjct: 261 TL 262


>gb|AFK38458.1| unknown [Lotus japonicus]
          Length = 73

 Score =  116 bits (291), Expect = 9e-24
 Identities = 55/57 (96%), Positives = 57/57 (100%)
 Frame = +2

Query: 47  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNVYKDHITL 217
           MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRADKIRIQKWYN+YKDHITL
Sbjct: 1   MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITL 57


>gb|ABR25610.1| ubiquitin-like protein 5 [Oryza sativa Indica Group]
          Length = 74

 Score =  116 bits (291), Expect = 9e-24
 Identities = 55/58 (94%), Positives = 58/58 (100%)
 Frame = +2

Query: 44  KMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNVYKDHITL 217
           +MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYN+YKDHITL
Sbjct: 1   EMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL 58


>ref|NP_001047489.1| Os02g0628800 [Oryza sativa Japonica Group]
           gi|48717041|dbj|BAD23730.1| ubiquitin-like protein
           [Oryza sativa Japonica Group]
           gi|113537020|dbj|BAF09403.1| Os02g0628800 [Oryza sativa
           Japonica Group] gi|149391243|gb|ABR25639.1| ubiquitin
           family protein [Oryza sativa Indica Group]
           gi|218191213|gb|EEC73640.1| hypothetical protein
           OsI_08154 [Oryza sativa Indica Group]
           gi|222623279|gb|EEE57411.1| hypothetical protein
           OsJ_07602 [Oryza sativa Japonica Group]
          Length = 73

 Score =  116 bits (290), Expect = 1e-23
 Identities = 55/57 (96%), Positives = 57/57 (100%)
 Frame = +2

Query: 47  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNVYKDHITL 217
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYN+YKDHITL
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL 57