BLASTX nr result

ID: Coptis24_contig00001540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001540
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545282.1| PREDICTED: uncharacterized protein LOC100805...   265   1e-68
ref|XP_002510369.1| conserved hypothetical protein [Ricinus comm...   252   1e-64
ref|XP_003549431.1| PREDICTED: uncharacterized protein LOC100813...   245   1e-62
ref|XP_002333972.1| predicted protein [Populus trichocarpa] gi|2...   236   1e-59
ref|XP_002301875.1| predicted protein [Populus trichocarpa] gi|2...   227   3e-57

>ref|XP_003545282.1| PREDICTED: uncharacterized protein LOC100805646 [Glycine max]
          Length = 1886

 Score =  265 bits (678), Expect = 1e-68
 Identities = 150/299 (50%), Positives = 195/299 (65%)
 Frame = -2

Query: 1095 TSLREIQKEQEHMSTSAQQMAPVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIEISG 916
            TSLR+I KEQE   +SA  ++P+ PP+K      T  + +++ ++ SS +  ASPI+I+ 
Sbjct: 1592 TSLRDILKEQERKGSSAIPVSPMPPPQKSQPPQSTWSSASSRSISASSPSKAASPIQINS 1651

Query: 915  LASPQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSSSRGTKSIPVEGTLVGLSTKQKF 736
             AS QSK + +DDLFWGP DQS Q   QSGFP LV+  SRG+K++P++G   GL T+QK 
Sbjct: 1652 QAS-QSKHKGDDDLFWGPMDQSKQDTKQSGFPQLVSQGSRGSKNVPLKGNSPGLLTRQKS 1710

Query: 735  SSSRSTANFLSSSTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSNDTSFLELC 556
             S + T  FL+SS  +++S  + +K   TR SEA DFRDWC+ E  RL G+ DTSFLE C
Sbjct: 1711 VSGKPTERFLASSPASSQSVLKLKKDAMTRHSEATDFRDWCENECVRLIGTKDTSFLEFC 1770

Query: 555  LMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQSHDDPKTSKPGCGN 376
            L Q   EAEMLL ENLGS DPDH FIDK L+YK LLP+DVL++AFQS +D K +  G   
Sbjct: 1771 LKQSRSEAEMLLIENLGSYDPDHQFIDKFLNYKELLPSDVLDIAFQSRNDKKVTGYGVEG 1830

Query: 375  VDTNIISDRDVDSAEVASHIGSXXXXXXXXXXXKVSASLLGFNVVSNRILMGEIQTAEN 199
              +      DVD  E +S  G            KVS S+LGFNVVSNRI+MGEIQ+ E+
Sbjct: 1831 TASVSADILDVDYTEGSSKGGG---KKKGKKGKKVSPSVLGFNVVSNRIMMGEIQSVED 1886


>ref|XP_002510369.1| conserved hypothetical protein [Ricinus communis]
            gi|223551070|gb|EEF52556.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1798

 Score =  252 bits (643), Expect = 1e-64
 Identities = 142/301 (47%), Positives = 188/301 (62%), Gaps = 2/301 (0%)
 Frame = -2

Query: 1095 TSLREIQKEQEHMSTSAQQMAPVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIEISG 916
            TSLR+IQKEQE   +S Q   P+  P+K   +     +GA+  L+ SS +  ASP++I+ 
Sbjct: 1498 TSLRDIQKEQEKKFSSVQPQNPISTPQKPQPSQVAHASGASWSLSASSPSKAASPMQINS 1557

Query: 915  LASPQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSSSRGTKSIPVEGTLVGLSTKQKF 736
             ++ QSK + +DDLFWGP DQS Q+  QS FP LV+  S G K+ PV+G+  G   +QK 
Sbjct: 1558 HSALQSKYKGDDDLFWGPVDQSKQETKQSEFPHLVSQGSWGAKNTPVKGSPSGSINRQKS 1617

Query: 735  SSSRSTANFLSSSTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSNDTSFLELC 556
               R     LSSS  +A+S  +G++    + SEA DFRDWC+ E  RLTG+ DTS LE C
Sbjct: 1618 IGGRQAERTLSSSPASAQSSLKGKRDAMNKHSEAMDFRDWCESECVRLTGTRDTSVLEFC 1677

Query: 555  LMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQSHDDPKTSKPGCGN 376
            L Q   EAE+LLKENLG  DPD  FIDK L+YK LLPADVLE+AFQS +D   +  G  +
Sbjct: 1678 LKQSRSEAELLLKENLGPNDPDDEFIDKFLNYKELLPADVLEIAFQSRNDRMATGLGARD 1737

Query: 375  VDTNIISDRDVDSAEVASHIGS--XXXXXXXXXXXKVSASLLGFNVVSNRILMGEIQTAE 202
            ++++ +  RD D    A   GS             KVS ++LGF+VVSNRI+MGEIQT E
Sbjct: 1738 MNSDNVGSRDFDHDFAAGADGSSKGGGKKKGKKGKKVSPAVLGFSVVSNRIMMGEIQTVE 1797

Query: 201  N 199
            +
Sbjct: 1798 D 1798


>ref|XP_003549431.1| PREDICTED: uncharacterized protein LOC100813188 [Glycine max]
          Length = 1781

 Score =  245 bits (626), Expect = 1e-62
 Identities = 146/302 (48%), Positives = 191/302 (63%), Gaps = 3/302 (0%)
 Frame = -2

Query: 1095 TSLREIQKEQEHMSTSAQQM--APVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIEI 922
            TSLR+I KEQE   +SA  +  +P+ PP+K      T  T +++ ++ SS +  ASPI+I
Sbjct: 1483 TSLRDILKEQERKGSSALPVTVSPMPPPQKSQPPQSTWSTVSSRSISASSPSKNASPIQI 1542

Query: 921  SGLASPQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSSSRGTKSIPVEGTLVGLSTKQ 742
            +  AS QSK + +DDLFWGP +QS Q   QS FP L +  S G+K+ P++G   GL T+Q
Sbjct: 1543 NSQAS-QSKYKGDDDLFWGPIEQSKQDTKQSDFPQLASQGSWGSKNGPLKGNSPGLLTRQ 1601

Query: 741  KFSSSRSTANFLSSSTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSNDTSFLE 562
            K  S + T   L+SS  +++S  + +K   TR SEA DFRDWC+ E  RL G+ DTSFLE
Sbjct: 1602 KSVSGKPTERSLASSPASSQSVLKLKKDAMTRHSEAMDFRDWCENECVRLIGTKDTSFLE 1661

Query: 561  LCLMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQ-SHDDPKTSKPG 385
             CL Q   EAEMLL ENLGS DPDH FIDK L+YK LLP+DVL++AFQ S +D K ++ G
Sbjct: 1662 FCLKQSRSEAEMLLIENLGSYDPDHEFIDKFLNYKELLPSDVLDIAFQSSRNDKKVTRHG 1721

Query: 384  CGNVDTNIISDRDVDSAEVASHIGSXXXXXXXXXXXKVSASLLGFNVVSNRILMGEIQTA 205
                 +     +DVD  E  S  G            KVS S+LGFNVVSNRI+MGEIQ+ 
Sbjct: 1722 AAGTASANADIQDVDYTEGGSSKGG--GKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQSV 1779

Query: 204  EN 199
            E+
Sbjct: 1780 ED 1781


>ref|XP_002333972.1| predicted protein [Populus trichocarpa] gi|222839392|gb|EEE77729.1|
            predicted protein [Populus trichocarpa]
          Length = 885

 Score =  236 bits (601), Expect = 1e-59
 Identities = 139/299 (46%), Positives = 180/299 (60%)
 Frame = -2

Query: 1095 TSLREIQKEQEHMSTSAQQMAPVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIEISG 916
            TSLR+IQKEQE   +SAQ    +  P+K        G+G++   + SS +  ASPI+I+ 
Sbjct: 590  TSLRDIQKEQEKKVSSAQPQNQIPIPQKPQPAQSAHGSGSSWSHSASSPSKAASPIQINS 649

Query: 915  LASPQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSSSRGTKSIPVEGTLVGLSTKQKF 736
             AS QSK + +D+LFWGP DQS Q+  QS FP + +  S GTK+ PV+G  V    +QK 
Sbjct: 650  RASSQSKYKGDDELFWGPIDQSKQEPKQSEFPHISSQGSWGTKNTPVKGAPVASLGRQKS 709

Query: 735  SSSRSTANFLSSSTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSNDTSFLELC 556
               R   + LSSST   +S  +G++    + SEA +FR WC+ E  RL G+ DTSFLE C
Sbjct: 710  VGGRPAEHSLSSSTATTQSSLKGKRDTMNKHSEAMEFRAWCENECVRLVGTKDTSFLEYC 769

Query: 555  LMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQSHDDPKTSKPGCGN 376
            L Q   EAEMLL ENL S DPDH FIDK L+ K +L ADVLE+AFQ  +D KTS     +
Sbjct: 770  LKQSRSEAEMLLIENLASFDPDHEFIDKFLNCKEMLGADVLEIAFQRQNDWKTSGISAKD 829

Query: 375  VDTNIISDRDVDSAEVASHIGSXXXXXXXXXXXKVSASLLGFNVVSNRILMGEIQTAEN 199
            V  +     D D  + +   GS           KV+ S+LGFNVVSNRI+MGEIQT E+
Sbjct: 830  VTFDNAGVEDYDREDGSGKGGS---KKKGKKGKKVNPSVLGFNVVSNRIMMGEIQTLED 885


>ref|XP_002301875.1| predicted protein [Populus trichocarpa] gi|222843601|gb|EEE81148.1|
            predicted protein [Populus trichocarpa]
          Length = 1846

 Score =  227 bits (579), Expect = 3e-57
 Identities = 139/310 (44%), Positives = 180/310 (58%), Gaps = 11/310 (3%)
 Frame = -2

Query: 1095 TSLREIQKEQEHMSTSAQQMAPVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIEISG 916
            TSLR+IQKEQE   +SAQ    +  P+K        G+G++   + SS +  ASPI+I+ 
Sbjct: 1540 TSLRDIQKEQEKKVSSAQPQNQIPIPQKPQPAQSAHGSGSSWSHSASSPSKAASPIQINS 1599

Query: 915  LASPQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSSSRGTKSIPVEGTLVGLSTKQKF 736
             AS QSK + +D+LFWGP DQS Q+  QS FP + +  S GTK+ PV+G  V    +QK 
Sbjct: 1600 RASSQSKYKGDDELFWGPIDQSKQEPKQSEFPHISSQGSWGTKNTPVKGAPVASLGRQKS 1659

Query: 735  SSSRSTANFLSSSTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSN-------- 580
               R   + LSSST   +S  +G++    + SEA +FR WC+ E  RL G+         
Sbjct: 1660 VGGRPAEHSLSSSTATTQSSLKGKRDTMNKHSEAMEFRAWCENECVRLVGTKVLSDAMES 1719

Query: 579  ---DTSFLELCLMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQSHD 409
               DTSFLE CL Q   EAEMLL ENL S DPDH FIDK L+ K +L ADVLE+AFQ  +
Sbjct: 1720 LVIDTSFLEYCLKQSRSEAEMLLIENLASFDPDHEFIDKFLNCKEMLGADVLEIAFQRQN 1779

Query: 408  DPKTSKPGCGNVDTNIISDRDVDSAEVASHIGSXXXXXXXXXXXKVSASLLGFNVVSNRI 229
            D KTS     +V  +     D D  + +   GS           KV+ S+LGFNVVSNRI
Sbjct: 1780 DWKTSGISAKDVTFDNAGVEDYDREDGSGKGGS---KKKGKKGKKVNPSVLGFNVVSNRI 1836

Query: 228  LMGEIQTAEN 199
            +MGEIQT E+
Sbjct: 1837 MMGEIQTLED 1846


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