BLASTX nr result

ID: Coptis24_contig00001534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001534
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36826.1| unknown [Lotus japonicus]                              100   4e-30
ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis...    96   7e-30
ref|NP_001241427.1| uncharacterized protein LOC100803033 [Glycin...   101   1e-29
ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-...   101   1e-29
gb|ACJ84537.1| unknown [Medicago truncatula] gi|388500526|gb|AFK...    99   1e-29

>gb|AFK36826.1| unknown [Lotus japonicus]
          Length = 254

 Score = 99.8 bits (247), Expect(3) = 4e-30
 Identities = 48/59 (81%), Positives = 56/59 (94%)
 Frame = -2

Query: 503 DRVLVKIKSAEEKTVGGILLPSTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 327
           DRVLVKIK AEEKTVGGILLPSTA+SKPQGGEVVAVGEGK++G N ++I+VKTGA++VY
Sbjct: 68  DRVLVKIKEAEEKTVGGILLPSTAQSKPQGGEVVAVGEGKSIGNNKVDISVKTGAKVVY 126



 Score = 50.8 bits (120), Expect(3) = 4e-30
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = -3

Query: 325 GTELEFYGSTHLLLKEDDIVGILETDEVK 239
           GTE+EF GS HL+LK+DDIVGILETDEV+
Sbjct: 131 GTEVEFNGSKHLILKDDDIVGILETDEVQ 159



 Score = 26.2 bits (56), Expect(3) = 4e-30
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = -1

Query: 237 KTAGGLFLTEASKD 196
           KTAGGL LTEA+K+
Sbjct: 178 KTAGGLLLTEATKE 191


>ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis]
           gi|223544718|gb|EEF46234.1| groes chaperonin, putative
           [Ricinus communis]
          Length = 253

 Score = 96.3 bits (238), Expect(3) = 7e-30
 Identities = 46/59 (77%), Positives = 56/59 (94%)
 Frame = -2

Query: 503 DRVLVKIKSAEEKTVGGILLPSTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 327
           DRVL+KIK AEEKT GGILLP++A++KPQGGEVVAVGEG+T+GKN L+I+VKTGAQ+VY
Sbjct: 67  DRVLLKIKVAEEKTDGGILLPTSAQTKPQGGEVVAVGEGRTIGKNKLDISVKTGAQVVY 125



 Score = 52.4 bits (124), Expect(3) = 7e-30
 Identities = 22/29 (75%), Positives = 28/29 (96%)
 Frame = -3

Query: 325 GTELEFYGSTHLLLKEDDIVGILETDEVK 239
           GTE+EF GS+HL+LKEDDIVG+LETD++K
Sbjct: 130 GTEVEFNGSSHLILKEDDIVGVLETDDIK 158



 Score = 27.3 bits (59), Expect(3) = 7e-30
 Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = -1

Query: 264 VFLRLMKSN-KTAGGLFLTEASKD 196
           VF+++  +  KTAGGL LTEA+K+
Sbjct: 167 VFIKIADAEEKTAGGLLLTEATKE 190


>ref|NP_001241427.1| uncharacterized protein LOC100803033 [Glycine max]
           gi|255645102|gb|ACU23050.1| unknown [Glycine max]
          Length = 253

 Score =  101 bits (252), Expect(3) = 1e-29
 Identities = 49/59 (83%), Positives = 56/59 (94%)
 Frame = -2

Query: 503 DRVLVKIKSAEEKTVGGILLPSTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 327
           DRVL+KIK AEEKT GGILLPSTA++KPQGGEVVAVGEGKT+GKN +EI+VKTGAQ+VY
Sbjct: 67  DRVLIKIKEAEEKTEGGILLPSTAQTKPQGGEVVAVGEGKTIGKNNVEISVKTGAQVVY 125



 Score = 47.0 bits (110), Expect(3) = 1e-29
 Identities = 19/29 (65%), Positives = 27/29 (93%)
 Frame = -3

Query: 325 GTELEFYGSTHLLLKEDDIVGILETDEVK 239
           GTE++F G+ HL++K+DDIVGILETD++K
Sbjct: 130 GTEVDFDGTKHLIVKDDDIVGILETDDIK 158



 Score = 26.6 bits (57), Expect(3) = 1e-29
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = -1

Query: 237 KTAGGLFLTEASKD 196
           KT+GGL LTEA+KD
Sbjct: 177 KTSGGLLLTEATKD 190


>ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-like [Glycine max]
           gi|255647873|gb|ACU24395.1| unknown [Glycine max]
          Length = 253

 Score =  101 bits (251), Expect(3) = 1e-29
 Identities = 49/59 (83%), Positives = 56/59 (94%)
 Frame = -2

Query: 503 DRVLVKIKSAEEKTVGGILLPSTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 327
           DRVL+KIK AEEKT GGILLPSTA++KPQGGEVVAVGEGKT+GKN +EI+VKTGAQ+VY
Sbjct: 67  DRVLIKIKEAEEKTEGGILLPSTAQTKPQGGEVVAVGEGKTVGKNNVEISVKTGAQVVY 125



 Score = 47.4 bits (111), Expect(3) = 1e-29
 Identities = 19/29 (65%), Positives = 27/29 (93%)
 Frame = -3

Query: 325 GTELEFYGSTHLLLKEDDIVGILETDEVK 239
           GTE++F G+ HL++K+DDIVGILETD++K
Sbjct: 130 GTEVDFNGTKHLIVKDDDIVGILETDDIK 158



 Score = 26.6 bits (57), Expect(3) = 1e-29
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = -1

Query: 237 KTAGGLFLTEASKD 196
           KT+GGL LTEA+KD
Sbjct: 177 KTSGGLLLTEATKD 190


>gb|ACJ84537.1| unknown [Medicago truncatula] gi|388500526|gb|AFK38329.1| unknown
           [Medicago truncatula]
          Length = 253

 Score = 98.6 bits (244), Expect(3) = 1e-29
 Identities = 47/59 (79%), Positives = 55/59 (93%)
 Frame = -2

Query: 503 DRVLVKIKSAEEKTVGGILLPSTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 327
           DRVLVKIK AEEKT GGILLPSTA+SKPQGGEVVA+G+GKT+GKN ++I+VK GAQ+VY
Sbjct: 67  DRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISVKAGAQVVY 125



 Score = 48.9 bits (115), Expect(3) = 1e-29
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = -3

Query: 325 GTELEFYGSTHLLLKEDDIVGILETDEVK 239
           GTE+EF GS HL+LK++DIVGILET+EVK
Sbjct: 130 GTEVEFDGSKHLILKDEDIVGILETEEVK 158



 Score = 27.7 bits (60), Expect(3) = 1e-29
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 237 KTAGGLFLTEASKD 196
           KTAGGL LTEA+KD
Sbjct: 177 KTAGGLLLTEATKD 190


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