BLASTX nr result
ID: Coptis24_contig00001534
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00001534 (513 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK36826.1| unknown [Lotus japonicus] 100 4e-30 ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis... 96 7e-30 ref|NP_001241427.1| uncharacterized protein LOC100803033 [Glycin... 101 1e-29 ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-... 101 1e-29 gb|ACJ84537.1| unknown [Medicago truncatula] gi|388500526|gb|AFK... 99 1e-29 >gb|AFK36826.1| unknown [Lotus japonicus] Length = 254 Score = 99.8 bits (247), Expect(3) = 4e-30 Identities = 48/59 (81%), Positives = 56/59 (94%) Frame = -2 Query: 503 DRVLVKIKSAEEKTVGGILLPSTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 327 DRVLVKIK AEEKTVGGILLPSTA+SKPQGGEVVAVGEGK++G N ++I+VKTGA++VY Sbjct: 68 DRVLVKIKEAEEKTVGGILLPSTAQSKPQGGEVVAVGEGKSIGNNKVDISVKTGAKVVY 126 Score = 50.8 bits (120), Expect(3) = 4e-30 Identities = 23/29 (79%), Positives = 27/29 (93%) Frame = -3 Query: 325 GTELEFYGSTHLLLKEDDIVGILETDEVK 239 GTE+EF GS HL+LK+DDIVGILETDEV+ Sbjct: 131 GTEVEFNGSKHLILKDDDIVGILETDEVQ 159 Score = 26.2 bits (56), Expect(3) = 4e-30 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = -1 Query: 237 KTAGGLFLTEASKD 196 KTAGGL LTEA+K+ Sbjct: 178 KTAGGLLLTEATKE 191 >ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis] gi|223544718|gb|EEF46234.1| groes chaperonin, putative [Ricinus communis] Length = 253 Score = 96.3 bits (238), Expect(3) = 7e-30 Identities = 46/59 (77%), Positives = 56/59 (94%) Frame = -2 Query: 503 DRVLVKIKSAEEKTVGGILLPSTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 327 DRVL+KIK AEEKT GGILLP++A++KPQGGEVVAVGEG+T+GKN L+I+VKTGAQ+VY Sbjct: 67 DRVLLKIKVAEEKTDGGILLPTSAQTKPQGGEVVAVGEGRTIGKNKLDISVKTGAQVVY 125 Score = 52.4 bits (124), Expect(3) = 7e-30 Identities = 22/29 (75%), Positives = 28/29 (96%) Frame = -3 Query: 325 GTELEFYGSTHLLLKEDDIVGILETDEVK 239 GTE+EF GS+HL+LKEDDIVG+LETD++K Sbjct: 130 GTEVEFNGSSHLILKEDDIVGVLETDDIK 158 Score = 27.3 bits (59), Expect(3) = 7e-30 Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 1/24 (4%) Frame = -1 Query: 264 VFLRLMKSN-KTAGGLFLTEASKD 196 VF+++ + KTAGGL LTEA+K+ Sbjct: 167 VFIKIADAEEKTAGGLLLTEATKE 190 >ref|NP_001241427.1| uncharacterized protein LOC100803033 [Glycine max] gi|255645102|gb|ACU23050.1| unknown [Glycine max] Length = 253 Score = 101 bits (252), Expect(3) = 1e-29 Identities = 49/59 (83%), Positives = 56/59 (94%) Frame = -2 Query: 503 DRVLVKIKSAEEKTVGGILLPSTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 327 DRVL+KIK AEEKT GGILLPSTA++KPQGGEVVAVGEGKT+GKN +EI+VKTGAQ+VY Sbjct: 67 DRVLIKIKEAEEKTEGGILLPSTAQTKPQGGEVVAVGEGKTIGKNNVEISVKTGAQVVY 125 Score = 47.0 bits (110), Expect(3) = 1e-29 Identities = 19/29 (65%), Positives = 27/29 (93%) Frame = -3 Query: 325 GTELEFYGSTHLLLKEDDIVGILETDEVK 239 GTE++F G+ HL++K+DDIVGILETD++K Sbjct: 130 GTEVDFDGTKHLIVKDDDIVGILETDDIK 158 Score = 26.6 bits (57), Expect(3) = 1e-29 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = -1 Query: 237 KTAGGLFLTEASKD 196 KT+GGL LTEA+KD Sbjct: 177 KTSGGLLLTEATKD 190 >ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-like [Glycine max] gi|255647873|gb|ACU24395.1| unknown [Glycine max] Length = 253 Score = 101 bits (251), Expect(3) = 1e-29 Identities = 49/59 (83%), Positives = 56/59 (94%) Frame = -2 Query: 503 DRVLVKIKSAEEKTVGGILLPSTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 327 DRVL+KIK AEEKT GGILLPSTA++KPQGGEVVAVGEGKT+GKN +EI+VKTGAQ+VY Sbjct: 67 DRVLIKIKEAEEKTEGGILLPSTAQTKPQGGEVVAVGEGKTVGKNNVEISVKTGAQVVY 125 Score = 47.4 bits (111), Expect(3) = 1e-29 Identities = 19/29 (65%), Positives = 27/29 (93%) Frame = -3 Query: 325 GTELEFYGSTHLLLKEDDIVGILETDEVK 239 GTE++F G+ HL++K+DDIVGILETD++K Sbjct: 130 GTEVDFNGTKHLIVKDDDIVGILETDDIK 158 Score = 26.6 bits (57), Expect(3) = 1e-29 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = -1 Query: 237 KTAGGLFLTEASKD 196 KT+GGL LTEA+KD Sbjct: 177 KTSGGLLLTEATKD 190 >gb|ACJ84537.1| unknown [Medicago truncatula] gi|388500526|gb|AFK38329.1| unknown [Medicago truncatula] Length = 253 Score = 98.6 bits (244), Expect(3) = 1e-29 Identities = 47/59 (79%), Positives = 55/59 (93%) Frame = -2 Query: 503 DRVLVKIKSAEEKTVGGILLPSTARSKPQGGEVVAVGEGKTLGKNMLEITVKTGAQIVY 327 DRVLVKIK AEEKT GGILLPSTA+SKPQGGEVVA+G+GKT+GKN ++I+VK GAQ+VY Sbjct: 67 DRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISVKAGAQVVY 125 Score = 48.9 bits (115), Expect(3) = 1e-29 Identities = 22/29 (75%), Positives = 27/29 (93%) Frame = -3 Query: 325 GTELEFYGSTHLLLKEDDIVGILETDEVK 239 GTE+EF GS HL+LK++DIVGILET+EVK Sbjct: 130 GTEVEFDGSKHLILKDEDIVGILETEEVK 158 Score = 27.7 bits (60), Expect(3) = 1e-29 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -1 Query: 237 KTAGGLFLTEASKD 196 KTAGGL LTEA+KD Sbjct: 177 KTAGGLLLTEATKD 190