BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001532
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   108   6e-22
gb|AFW90627.1| hypothetical protein [Solanum tuberosum]                83   3e-14
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    79   5e-13
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    79   5e-13

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/132 (41%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
 Frame = -2

Query: 430  DMDSIPVDIIEVIGKRLDDIDDHVRFGAVCKTWRSL----KIGYKKSYTPWLMLPERDEN 263
            D   +P D +++I ++L  ++D+VRFG VCK+W S+    +     S +PWLML E++ +
Sbjct: 921  DWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKSPWLMLAEKENS 980

Query: 262  NSDGEQIHHNNRKFVCLSSGKTFNVYLPECQGSRCFGSPFGWLLTVGLDLNIHLLNPLTR 83
               G         F    SGK + + LPE  G  C+GSP+GWL+T+G DL++ LLNPLTR
Sbjct: 981  EIRG---------FYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTR 1031

Query: 82   VQLSLPPQRTFP 47
            VQ+ LP  R  P
Sbjct: 1032 VQILLPSLRACP 1043


>gb|AFW90627.1| hypothetical protein [Solanum tuberosum]
          Length = 248

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
 Frame = -2

Query: 430 DMDSIPVDIIEVIGKRLDDIDDHVRFGAVCKTWRSL--KIGYKKSY--TPWLMLPERDEN 263
           D   + +D++  IG+ L+ I+D++ FG VCK+W S+  K  +       PWLML E ++N
Sbjct: 3   DWSELQLDLLVSIGRCLNLIEDYLNFGRVCKSWHSVATKANFNNDLCRAPWLMLAEEEDN 62

Query: 262 NSDGEQIHHNNRKFVCLSSGKTFNVYLPECQGSRCFGSPFGWLLTVGLDLNIHLLNPLTR 83
                      RKF  L +G   N  +P+    RC  S  GWL+TVG +  I LL+P + 
Sbjct: 63  EV---------RKFFSLYNGMILNKRIPKASRKRCLES-MGWLITVGEEGEISLLHPFSD 112

Query: 82  VQLSLPPQRT 53
           VQ+ LP Q T
Sbjct: 113 VQIELPHQNT 122


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 3/128 (2%)
 Frame = -2

Query: 418 IPVDIIEVIGKRLDDIDDHVRFGAVCKTWRSL---KIGYKKSYTPWLMLPERDENNSDGE 248
           +P ++++ I ++  +  D++   AVCK+W S    K        PWL+LP    N     
Sbjct: 7   LPQELLQTITQKQSNYVDYISTRAVCKSWWSAIPKKPHDLLCQLPWLLLPYHKNNP---- 62

Query: 247 QIHHNNRKFVCLSSGKTFNVYLPECQGSRCFGSPFGWLLTVGLDLNIHLLNPLTRVQLSL 68
               N+R F  L+ GKT+++ LPE    RC GS  GWL+ V    +I LLNPLT+ ++ L
Sbjct: 63  ----NHRGFYNLADGKTYHLELPETIEKRCCGSSHGWLVMVEDTPSIFLLNPLTKARIEL 118

Query: 67  PPQRTFPF 44
           P   TFP+
Sbjct: 119 PSLSTFPY 126


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 50/132 (37%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
 Frame = -2

Query: 430 DMDSIPVDIIEVIGKRLDDIDDHVRFGAVCKTWRSL---KIGYKKSYTPWLMLPERDENN 260
           D   +  ++++ I K+     D+VRF AVC  WR+       +  +  PWLMLP+     
Sbjct: 3   DWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQ----- 57

Query: 259 SDGEQIHHNNRKFVCLSSGKTFNVYLPECQGSRCF-GSPFGWLLTVGLDLNIHLLNPLTR 83
               Q HH +R F  LS  K   + LPE    R   GS  GWLL +     I LLNPLTR
Sbjct: 58  ---SQPHHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTR 114

Query: 82  VQLSLPPQRTFP 47
            ++ LPP  TFP
Sbjct: 115 SKVHLPPLSTFP 126


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
 Frame = -2

Query: 418 IPVDIIEVIGKRLDDIDDHVRFGAVCKTWRSLKIGYKKSYT-----PWLMLPERDENNSD 254
           +P ++++ I ++  +  D++   AVCK+W S     KK +      PWL+LP   +N   
Sbjct: 7   LPQELLQTITQKQTNYVDYISTRAVCKSWWSAIP--KKPHDLLCRLPWLLLPHHKDNP-- 62

Query: 253 GEQIHHNNRKFVCLSSGKTFNVYLPECQGSRCFGSPFGWLLTVGLDLNIHLLNPLTRVQL 74
                 N+R F   S GKT+++ LPE    RC GS  GWL+ V    +I LLNPLT+ ++
Sbjct: 63  ------NHRGFYNPSDGKTYHLELPETVDKRCCGSSHGWLVMVEDTPSIFLLNPLTKSRI 116

Query: 73  SLPPQRTFP-------FQ-----SEYYIEPSHLR 8
            LP   TFP       +Q     +EY+I  + LR
Sbjct: 117 ELPSLSTFPNFPTEVIYQNSRNLNEYFIRNNKLR 150