BLASTX nr result

ID: Coptis24_contig00001500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001500
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281096.1| PREDICTED: tRNA 2'-phosphotransferase 1 [Vit...   159   2e-37
ref|XP_002274805.1| PREDICTED: tRNA 2'-phosphotransferase 1 [Vit...   155   2e-36
ref|XP_004133917.1| PREDICTED: putative tRNA 2'-phosphotransfera...   155   4e-36
gb|AFK41153.1| unknown [Lotus japonicus]                              154   9e-36
gb|AFK33903.1| unknown [Lotus japonicus]                              153   2e-35

>ref|XP_002281096.1| PREDICTED: tRNA 2'-phosphotransferase 1 [Vitis vinifera]
           gi|296089204|emb|CBI38907.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  159 bits (403), Expect = 2e-37
 Identities = 80/99 (80%), Positives = 90/99 (90%), Gaps = 3/99 (3%)
 Frame = -1

Query: 290 RDDRQRT---SGGRGGSNPDKIDALGRLLTRILRHIASELNLNMRSDGYVRVSDVLKLNM 120
           RDDR+R+    GG GGS  DKIDALGRLLTRILRH+ASELNLNMRSDGY+RV D+LKLNM
Sbjct: 71  RDDRERSRGRGGGGGGSGKDKIDALGRLLTRILRHMASELNLNMRSDGYIRVEDLLKLNM 130

Query: 119 KTFADIPIRSHTVEDIREAVRRDNKQRFSLLEENDELLI 3
           KTFA+IP+RSHT++DIREAVR+DNKQRFSLLEEN ELLI
Sbjct: 131 KTFANIPLRSHTIDDIREAVRKDNKQRFSLLEENGELLI 169


>ref|XP_002274805.1| PREDICTED: tRNA 2'-phosphotransferase 1 [Vitis vinifera]
           gi|296089203|emb|CBI38906.3| unnamed protein product
           [Vitis vinifera]
          Length = 301

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/100 (79%), Positives = 88/100 (88%), Gaps = 4/100 (4%)
 Frame = -1

Query: 290 RDDRQRT----SGGRGGSNPDKIDALGRLLTRILRHIASELNLNMRSDGYVRVSDVLKLN 123
           RDDR+R+     GG G S  DKIDALGRLLTRILRH+ASELNLNMRSDGYVRV D+LKLN
Sbjct: 74  RDDRERSRGRGGGGGGSSGKDKIDALGRLLTRILRHMASELNLNMRSDGYVRVQDLLKLN 133

Query: 122 MKTFADIPIRSHTVEDIREAVRRDNKQRFSLLEENDELLI 3
           MKTFA+IP+RSHT++DIREAVR+DNKQRF LLEEN ELLI
Sbjct: 134 MKTFANIPLRSHTIDDIREAVRKDNKQRFGLLEENGELLI 173


>ref|XP_004133917.1| PREDICTED: putative tRNA 2'-phosphotransferase-like [Cucumis
           sativus] gi|449529309|ref|XP_004171642.1| PREDICTED:
           putative tRNA 2'-phosphotransferase-like [Cucumis
           sativus]
          Length = 254

 Score =  155 bits (391), Expect = 4e-36
 Identities = 76/102 (74%), Positives = 91/102 (89%), Gaps = 3/102 (2%)
 Frame = -1

Query: 299 MEKRDDRQRT---SGGRGGSNPDKIDALGRLLTRILRHIASELNLNMRSDGYVRVSDVLK 129
           ++ R+DR+RT    GG GGS  DKIDALGRLLTR+LRH+ASELNLNMRSDGYV+V D+LK
Sbjct: 25  LDLRNDRERTRGRGGGGGGSGKDKIDALGRLLTRVLRHMASELNLNMRSDGYVKVEDLLK 84

Query: 128 LNMKTFADIPIRSHTVEDIREAVRRDNKQRFSLLEENDELLI 3
           LN+KTFA+IP+RSHT++DIREAVR+DNKQRFS L+EN ELLI
Sbjct: 85  LNLKTFANIPLRSHTIDDIREAVRKDNKQRFSFLDENGELLI 126


>gb|AFK41153.1| unknown [Lotus japonicus]
          Length = 293

 Score =  154 bits (388), Expect = 9e-36
 Identities = 76/100 (76%), Positives = 90/100 (90%), Gaps = 2/100 (2%)
 Frame = -1

Query: 296 EKRDDRQRTSG--GRGGSNPDKIDALGRLLTRILRHIASELNLNMRSDGYVRVSDVLKLN 123
           + R+DR+RT G  G GGS  DKIDALGRLLTRILRH+ASELNLN+RSDGYV V+D+LKLN
Sbjct: 66  DMRNDRERTRGRGGEGGSGKDKIDALGRLLTRILRHMASELNLNLRSDGYVNVNDLLKLN 125

Query: 122 MKTFADIPIRSHTVEDIREAVRRDNKQRFSLLEENDELLI 3
           +KT A+IP+RSHT++DIREAVR+DNKQRFSL+EEN ELLI
Sbjct: 126 LKTLANIPLRSHTIDDIREAVRKDNKQRFSLIEENGELLI 165


>gb|AFK33903.1| unknown [Lotus japonicus]
          Length = 293

 Score =  153 bits (386), Expect = 2e-35
 Identities = 76/100 (76%), Positives = 90/100 (90%), Gaps = 2/100 (2%)
 Frame = -1

Query: 296 EKRDDRQRTSG--GRGGSNPDKIDALGRLLTRILRHIASELNLNMRSDGYVRVSDVLKLN 123
           + R+DR+RT G  G GGS  DKIDALGRLLTRILRH+ASELNLN+RSDGYV V+D+LKLN
Sbjct: 66  DMRNDRERTRGRGGGGGSGKDKIDALGRLLTRILRHMASELNLNLRSDGYVNVNDLLKLN 125

Query: 122 MKTFADIPIRSHTVEDIREAVRRDNKQRFSLLEENDELLI 3
           +KT A+IP+RSHT++DIREAVR+DNKQRFSL+EEN ELLI
Sbjct: 126 LKTLANIPLRSHTIDDIREAVRKDNKQRFSLIEENGELLI 165


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