BLASTX nr result

ID: Coptis24_contig00001491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001491
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303509.1| predicted protein [Populus trichocarpa] gi|2...   201   1e-49
ref|XP_002525907.1| gaba(A) receptor-associated protein, putativ...   201   2e-49
gb|AFK46365.1| unknown [Lotus japonicus]                              200   2e-49
ref|XP_003608728.1| Autophagy-related protein 8f [Medicago trunc...   200   2e-49
emb|CAD33929.1| microtubule associated protein [Cicer arietinum]      200   2e-49

>ref|XP_002303509.1| predicted protein [Populus trichocarpa] gi|222840941|gb|EEE78488.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score =  201 bits (512), Expect = 1e-49
 Identities = 103/119 (86%), Positives = 105/119 (88%)
 Frame = -2

Query: 592 MAKSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 413
           MAKSYFKQEHDL            KYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 412 FVYVIRKRIKLSAEKAIFIFVDNVLPATGAIMSAIYDEKKDEDGFLYVTYSGENTFGVQ 236
           FVYVIRKRIKLSAEKAIFIFVDNVLP TGAIMS+IY+EKKDEDGFLYVTYSGENTFG Q
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSIYEEKKDEDGFLYVTYSGENTFGTQ 119


>ref|XP_002525907.1| gaba(A) receptor-associated protein, putative [Ricinus communis]
           gi|223534821|gb|EEF36511.1| gaba(A) receptor-associated
           protein, putative [Ricinus communis]
          Length = 122

 Score =  201 bits (510), Expect = 2e-49
 Identities = 103/117 (88%), Positives = 104/117 (88%)
 Frame = -2

Query: 592 MAKSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 413
           MAKSYFKQEHDL            KYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 412 FVYVIRKRIKLSAEKAIFIFVDNVLPATGAIMSAIYDEKKDEDGFLYVTYSGENTFG 242
           FVYVIRKRIKLSAEKAIFIFVDNVLP TGAIMSAIY+EKKDEDGFLYVTYSGENTFG
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 117


>gb|AFK46365.1| unknown [Lotus japonicus]
          Length = 122

 Score =  200 bits (509), Expect = 2e-49
 Identities = 103/117 (88%), Positives = 104/117 (88%)
 Frame = -2

Query: 592 MAKSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 413
           MAKSYFKQEHDL            KYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRRAEAVRIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 412 FVYVIRKRIKLSAEKAIFIFVDNVLPATGAIMSAIYDEKKDEDGFLYVTYSGENTFG 242
           FVYVIRKRIKLSAEKAIFIFVDNVLP TGAIMSAIYDEKKDEDGFLYVTYSGENTFG
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFG 117


>ref|XP_003608728.1| Autophagy-related protein 8f [Medicago truncatula]
           gi|355509783|gb|AES90925.1| Autophagy-related protein 8f
           [Medicago truncatula] gi|388516669|gb|AFK46396.1|
           unknown [Medicago truncatula]
          Length = 122

 Score =  200 bits (509), Expect = 2e-49
 Identities = 103/117 (88%), Positives = 104/117 (88%)
 Frame = -2

Query: 592 MAKSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 413
           MAKSYFKQEHDL            KYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 412 FVYVIRKRIKLSAEKAIFIFVDNVLPATGAIMSAIYDEKKDEDGFLYVTYSGENTFG 242
           FVYVIRKRIKLSAEKAIFIFVDNVLP TGAIMSAIYDEKKDEDGFLYVTYSGENTFG
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFG 117


>emb|CAD33929.1| microtubule associated protein [Cicer arietinum]
          Length = 121

 Score =  200 bits (509), Expect = 2e-49
 Identities = 103/117 (88%), Positives = 104/117 (88%)
 Frame = -2

Query: 592 MAKSYFKQEHDLXXXXXXXXXXXXKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 413
           MAKSYFKQEHDL            KYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 412 FVYVIRKRIKLSAEKAIFIFVDNVLPATGAIMSAIYDEKKDEDGFLYVTYSGENTFG 242
           FVYVIRKRIKLSAEKAIFIFVDNVLP TGAIMSAIYDEKKDEDGFLYVTYSGENTFG
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFG 117


Top