BLASTX nr result

ID: Coptis24_contig00001384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001384
         (3064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20940.3| unnamed protein product [Vitis vinifera]              194   1e-46
ref|XP_002281922.1| PREDICTED: uncharacterized protein LOC100264...   194   1e-46
ref|XP_002516604.1| hypothetical protein RCOM_0804080 [Ricinus c...   181   1e-42
ref|XP_003549238.1| PREDICTED: uncharacterized protein LOC100789...   174   1e-40
ref|XP_002309585.1| hypothetical protein POPTRDRAFT_561815 [Popu...   174   1e-40

>emb|CBI20940.3| unnamed protein product [Vitis vinifera]
          Length = 1634

 Score =  194 bits (493), Expect = 1e-46
 Identities = 100/164 (60%), Positives = 120/164 (73%), Gaps = 1/164 (0%)
 Frame = -3

Query: 566  NSGQVTLKFSIP-LQFVNDTFRAENSWLFRTLLLLQYGVVMVMWPKVQLEMLFVDNVVGL 390
            NS     +FS+P L  +N  F AEN WLF T+LL QYGVVM  WPKV+LEMLFVDN+VGL
Sbjct: 646  NSRHFRFEFSLPALPVLNCAFGAENFWLFHTVLLHQYGVVMPKWPKVRLEMLFVDNLVGL 705

Query: 389  RFLLFEGCLMQAVGFVCLVLLAFHQQPDEHGEVLDWQVPVTSIRLEISGFPSFGRRFIFV 210
            RFLLFEGCL QAV FVCLVL  F+ QP+E G  +D Q PVTSI+ ++S      ++ +F 
Sbjct: 706  RFLLFEGCLKQAVAFVCLVLTIFN-QPNEQGRYVDLQFPVTSIKFKLSCVQDLQKQLVFA 764

Query: 209  LYNFVEVKNSKWLYLDKKLKQYYSVTKQLPLSECTYHNIKILQN 78
             YNF +VK+SKW YLD KLK+Y  +TKQLPLSECTY NI  LQ+
Sbjct: 765  FYNFSKVKDSKWFYLDCKLKRYCLLTKQLPLSECTYDNIMALQS 808


>ref|XP_002281922.1| PREDICTED: uncharacterized protein LOC100264575 [Vitis vinifera]
          Length = 1679

 Score =  194 bits (493), Expect = 1e-46
 Identities = 100/164 (60%), Positives = 120/164 (73%), Gaps = 1/164 (0%)
 Frame = -3

Query: 566  NSGQVTLKFSIP-LQFVNDTFRAENSWLFRTLLLLQYGVVMVMWPKVQLEMLFVDNVVGL 390
            NS     +FS+P L  +N  F AEN WLF T+LL QYGVVM  WPKV+LEMLFVDN+VGL
Sbjct: 646  NSRHFRFEFSLPALPVLNCAFGAENFWLFHTVLLHQYGVVMPKWPKVRLEMLFVDNLVGL 705

Query: 389  RFLLFEGCLMQAVGFVCLVLLAFHQQPDEHGEVLDWQVPVTSIRLEISGFPSFGRRFIFV 210
            RFLLFEGCL QAV FVCLVL  F+ QP+E G  +D Q PVTSI+ ++S      ++ +F 
Sbjct: 706  RFLLFEGCLKQAVAFVCLVLTIFN-QPNEQGRYVDLQFPVTSIKFKLSCVQDLQKQLVFA 764

Query: 209  LYNFVEVKNSKWLYLDKKLKQYYSVTKQLPLSECTYHNIKILQN 78
             YNF +VK+SKW YLD KLK+Y  +TKQLPLSECTY NI  LQ+
Sbjct: 765  FYNFSKVKDSKWFYLDCKLKRYCLLTKQLPLSECTYDNIMALQS 808


>ref|XP_002516604.1| hypothetical protein RCOM_0804080 [Ricinus communis]
            gi|223544424|gb|EEF45945.1| hypothetical protein
            RCOM_0804080 [Ricinus communis]
          Length = 1705

 Score =  181 bits (458), Expect = 1e-42
 Identities = 89/158 (56%), Positives = 115/158 (72%), Gaps = 1/158 (0%)
 Frame = -3

Query: 518  NDTFRAENSWLFRTLLLLQYGVVMVMWPKVQLEMLFVDNVVGLRFLLFEGCLMQAVGFVC 339
            N +F + ++W    LLLLQ+G +M  WP+V LEMLFVDN+VGLRFLLFEGCL QA+ FV 
Sbjct: 680  NFSFISGHTWFCNALLLLQHGRLMTTWPRVHLEMLFVDNIVGLRFLLFEGCLKQAIAFVL 739

Query: 338  LVLLAFHQQPDEHGEVLDWQVPVTSIRLEISGFPSFGRRFIFVLYNFVEVKNSKWLYLDK 159
             VL  FHQ P EHG+ +D Q+PVTSI+ + S    F ++ +F  YNF E+KNSKW++LD 
Sbjct: 740  QVLTVFHQ-PTEHGKFVDLQLPVTSIKFKFSCIQDFRKQLVFAFYNFSELKNSKWMHLDS 798

Query: 158  KLKQYYSVTKQLPLSECTYHNIKILQNRSYQPF-PSVC 48
            +LK++  +TKQLPLSECTY N+K LQN + Q    SVC
Sbjct: 799  RLKRHCLLTKQLPLSECTYDNVKALQNGTSQLLDSSVC 836


>ref|XP_003549238.1| PREDICTED: uncharacterized protein LOC100789801 [Glycine max]
          Length = 1586

 Score =  174 bits (441), Expect = 1e-40
 Identities = 94/185 (50%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
 Frame = -3

Query: 602  PKFVSDKKKGYFNSGQVTLKFSIPLQFV-NDTFRAENSWLFRTLLLLQYGVVMVMWPKVQ 426
            PK   D K   F  G      + P++ V ND F++EN WL  T+LLL++G VM  WP+V 
Sbjct: 599  PKVFWDMKSASFKFG-----LNFPMRLVLNDFFQSENLWLLYTVLLLRFGTVMAKWPRVY 653

Query: 425  LEMLFVDNVVGLRFLLFEGCLMQAVGFVCLVLLAFHQQPDEHGEVLDWQVPVTSIRLEIS 246
            LEMLFVDNVVGLRFLLFEGCL  A  FV  VL  FH QPD  G+ +D Q P TSI  + S
Sbjct: 654  LEMLFVDNVVGLRFLLFEGCLNTAAAFVFFVLRVFH-QPDCQGKYVDLQFPCTSIGFKFS 712

Query: 245  GFPSFGRRFIFVLYNFVEVKNSKWLYLDKKLKQYYSVTKQLPLSECTYHNIKILQNRSYQ 66
                  +  +F  YNF EVKNSKW++LD KLK++  ++KQL LSECTY NI+ LQ  + +
Sbjct: 713  SVHVIKKPLVFEFYNFSEVKNSKWMHLDSKLKEHCLLSKQLHLSECTYDNIQALQKVTQK 772

Query: 65   PFPSV 51
              P +
Sbjct: 773  SRPGI 777


>ref|XP_002309585.1| hypothetical protein POPTRDRAFT_561815 [Populus trichocarpa]
            gi|222855561|gb|EEE93108.1| hypothetical protein
            POPTRDRAFT_561815 [Populus trichocarpa]
          Length = 1686

 Score =  174 bits (441), Expect = 1e-40
 Identities = 83/156 (53%), Positives = 112/156 (71%)
 Frame = -3

Query: 548  LKFSIPLQFVNDTFRAENSWLFRTLLLLQYGVVMVMWPKVQLEMLFVDNVVGLRFLLFEG 369
            L F +P    + +F +E  WL   + LLQYG++M  WP++ LEMLFVDN VGLRFLLFEG
Sbjct: 716  LSFLLPSVPRHYSFGSEIVWLIHAMALLQYGMLMTTWPRIHLEMLFVDNGVGLRFLLFEG 775

Query: 368  CLMQAVGFVCLVLLAFHQQPDEHGEVLDWQVPVTSIRLEISGFPSFGRRFIFVLYNFVEV 189
            CL +AV FV LVL  F+Q  ++ G+  D+Q+P+TSIR + S    F ++F F  +NF EV
Sbjct: 776  CLKEAVAFVFLVLTIFYQPNEQQGKCADFQLPITSIRFKFSCIQDFRKQFAFAFHNFSEV 835

Query: 188  KNSKWLYLDKKLKQYYSVTKQLPLSECTYHNIKILQ 81
            +NSKW+YLD KLK++  +++QLPLSECTY N+K LQ
Sbjct: 836  ENSKWIYLDHKLKKHCLLSRQLPLSECTYDNVKALQ 871


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