BLASTX nr result

ID: Coptis24_contig00001376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001376
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38849.1| unknown [Lotus japonicus] gi|388522485|gb|AFK4930...   103   4e-20
gb|AAQ84111.1| Clt1 [Citrus trifoliata]                               103   5e-20
gb|ACV50425.1| cold induced plasma membrane protein [Jatropha cu...   101   2e-19
gb|ADK27676.1| plasma membrane protein 3-1 [Salvia miltiorrhiza]      100   7e-19
ref|XP_003626132.1| Hydrophobic protein LTI6A [Medicago truncatu...    99   1e-18

>gb|AFK38849.1| unknown [Lotus japonicus] gi|388522485|gb|AFK49304.1| unknown
           [Lotus japonicus]
          Length = 54

 Score =  103 bits (258), Expect = 4e-20
 Identities = 49/54 (90%), Positives = 50/54 (92%)
 Frame = -2

Query: 412 MSGATCVEIILAIILPPLGVFLRFGCKAEFWICLLLTILGYIPGIIYAIYTITK 251
           M  ATCV+IILAIILPPLGVFLRFGCK EFWICLLLTILGYIPGIIYAIY ITK
Sbjct: 1   MGTATCVDIILAIILPPLGVFLRFGCKVEFWICLLLTILGYIPGIIYAIYAITK 54


>gb|AAQ84111.1| Clt1 [Citrus trifoliata]
          Length = 54

 Score =  103 bits (257), Expect = 5e-20
 Identities = 47/54 (87%), Positives = 51/54 (94%)
 Frame = -2

Query: 412 MSGATCVEIILAIILPPLGVFLRFGCKAEFWICLLLTILGYIPGIIYAIYTITK 251
           M  ATCV+IILA+ILPPLGVFL+FGCKAEFWICLLLTILGYIPGIIYA+Y ITK
Sbjct: 1   MGTATCVDIILAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYVITK 54


>gb|ACV50425.1| cold induced plasma membrane protein [Jatropha curcas]
          Length = 57

 Score =  101 bits (251), Expect = 2e-19
 Identities = 44/51 (86%), Positives = 50/51 (98%)
 Frame = -2

Query: 403 ATCVEIILAIILPPLGVFLRFGCKAEFWICLLLTILGYIPGIIYAIYTITK 251
           ATC++I+LA+ILPPLGVFL+FGCKAEFWICLLLTILGYIPGIIYA+Y ITK
Sbjct: 7   ATCIDILLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAITK 57


>gb|ADK27676.1| plasma membrane protein 3-1 [Salvia miltiorrhiza]
          Length = 55

 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 43/54 (79%), Positives = 51/54 (94%)
 Frame = -2

Query: 412 MSGATCVEIILAIILPPLGVFLRFGCKAEFWICLLLTILGYIPGIIYAIYTITK 251
           M+ ATC++II+AIILPPLGVFL+FGCK EFW+CLLLT+LGYIPGIIYA+Y ITK
Sbjct: 1   MAAATCIDIIVAIILPPLGVFLKFGCKHEFWLCLLLTLLGYIPGIIYAVYAITK 54


>ref|XP_003626132.1| Hydrophobic protein LTI6A [Medicago truncatula]
           gi|87241339|gb|ABD33197.1| Protein of unknown function
           UPF0057 [Medicago truncatula]
           gi|355501147|gb|AES82350.1| Hydrophobic protein LTI6A
           [Medicago truncatula] gi|388497498|gb|AFK36815.1|
           unknown [Medicago truncatula]
          Length = 54

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 44/54 (81%), Positives = 49/54 (90%)
 Frame = -2

Query: 412 MSGATCVEIILAIILPPLGVFLRFGCKAEFWICLLLTILGYIPGIIYAIYTITK 251
           M  ATC++IILAIILPPLGVFL+FGC  EFWICL+LTILGY+PGIIYAIY ITK
Sbjct: 1   MGTATCIDIILAIILPPLGVFLKFGCNVEFWICLILTILGYLPGIIYAIYAITK 54


Top