BLASTX nr result

ID: Coptis24_contig00001298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001298
         (1932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF99254.1| galactinol synthase [Coptis japonica]                 657   0.0  
ref|XP_002265947.1| PREDICTED: glycogenin-1 isoform 1 [Vitis vin...   588   e-165
ref|XP_002311774.1| predicted protein [Populus trichocarpa] gi|1...   583   e-164
gb|ACA04029.1| galactinol synthase 1 [Populus trichocarpa x Popu...   582   e-163
gb|ACA04028.1| galactinol synthase 1 [Populus trichocarpa x Popu...   582   e-163

>dbj|BAF99254.1| galactinol synthase [Coptis japonica]
          Length = 336

 Score =  657 bits (1694), Expect = 0.0
 Identities = 316/322 (98%), Positives = 317/322 (98%)
 Frame = -3

Query: 1807 MAPAVTVDVFTGTGKVATLNTGYSKRAYVTFLAGSGDYVKGVVGLAKGLRKVKSAYPLVV 1628
            MAPAVTVD FT TGKVATLNTGYSKRAYVTFLAGSGDYVKGVVGLAKGLRKVKSAYPLVV
Sbjct: 1    MAPAVTVDGFTSTGKVATLNTGYSKRAYVTFLAGSGDYVKGVVGLAKGLRKVKSAYPLVV 60

Query: 1627 AMLPDVPEEHRKILRSQGCILKEIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKMV 1448
            AMLPDVPEEHRKILRSQGCILKEIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKMV
Sbjct: 61   AMLPDVPEEHRKILRSQGCILKEIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKMV 120

Query: 1447 YLDADIQVFENIDHLFDTLNGYFYAVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPAEMG 1268
            YLDADIQVFENIDHLFDT NGYF+AVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPAEMG
Sbjct: 121  YLDADIQVFENIDHLFDTPNGYFFAVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPAEMG 180

Query: 1267 SPPLLYFNAGMFVYEPSRLTFESLIENLRITAPTPFAEQDFLNKFFNHVYKPIPLVYNLV 1088
            SPP LYFNAGMFVYEPSRLTFESLIENLRITAPTPFAEQDFLNKFFNHVYKPIPLVYNLV
Sbjct: 181  SPPPLYFNAGMFVYEPSRLTFESLIENLRITAPTPFAEQDFLNKFFNHVYKPIPLVYNLV 240

Query: 1087 LAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEANMDREDIKVLVAKWWEVYNDPSLD 908
            LAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEANMDREDIKVLVAKWWEVYNDPSLD
Sbjct: 241  LAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEANMDREDIKVLVAKWWEVYNDPSLD 300

Query: 907  FKADDSVTNRETFSRPLLLASM 842
            FKADDSVTNRE FSRPLLLASM
Sbjct: 301  FKADDSVTNREAFSRPLLLASM 322


>ref|XP_002265947.1| PREDICTED: glycogenin-1 isoform 1 [Vitis vinifera]
          Length = 336

 Score =  588 bits (1516), Expect = e-165
 Identities = 275/322 (85%), Positives = 299/322 (92%)
 Frame = -3

Query: 1807 MAPAVTVDVFTGTGKVATLNTGYSKRAYVTFLAGSGDYVKGVVGLAKGLRKVKSAYPLVV 1628
            MAP V  DVFT  GKV+TLN GYSK AYVTFLAG+GDYVKGVVGLAKGLRKVKSAYPLVV
Sbjct: 1    MAPGVPADVFTAGGKVSTLNAGYSKGAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVV 60

Query: 1627 AMLPDVPEEHRKILRSQGCILKEIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKMV 1448
            AMLPDVPEEHR+IL+SQGCI++EIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKMV
Sbjct: 61   AMLPDVPEEHREILKSQGCIIREIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKMV 120

Query: 1447 YLDADIQVFENIDHLFDTLNGYFYAVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPAEMG 1268
            YLDADIQV++NIDHL D  +GYFYAVMDCFCEKTWSH+PQYSVGYCQQCPDKVTWPAEMG
Sbjct: 121  YLDADIQVYDNIDHLMDAPDGYFYAVMDCFCEKTWSHTPQYSVGYCQQCPDKVTWPAEMG 180

Query: 1267 SPPLLYFNAGMFVYEPSRLTFESLIENLRITAPTPFAEQDFLNKFFNHVYKPIPLVYNLV 1088
            SPP LYFNAGMFV+EPSRLT+ESL+  LRIT PT FAEQDFLN FF H+YKPIPLVYNLV
Sbjct: 181  SPPPLYFNAGMFVFEPSRLTYESLLHTLRITPPTAFAEQDFLNMFFQHMYKPIPLVYNLV 240

Query: 1087 LAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEANMDREDIKVLVAKWWEVYNDPSLD 908
            LAMLWRHPENVEL++VKVVHYCAAGSKPWRYTG+EANM+REDIK+LVAKWW++YND SLD
Sbjct: 241  LAMLWRHPENVELDQVKVVHYCAAGSKPWRYTGKEANMEREDIKMLVAKWWDIYNDKSLD 300

Query: 907  FKADDSVTNRETFSRPLLLASM 842
            FKA+DSV   E FSRP ++ASM
Sbjct: 301  FKAEDSVPEGEGFSRPSIMASM 322


>ref|XP_002311774.1| predicted protein [Populus trichocarpa] gi|118482705|gb|ABK93271.1|
            unknown [Populus trichocarpa] gi|118488123|gb|ABK95881.1|
            unknown [Populus trichocarpa] gi|167858173|gb|ACA04027.1|
            galactinol synthase 1 [Populus trichocarpa]
            gi|222851594|gb|EEE89141.1| predicted protein [Populus
            trichocarpa]
          Length = 338

 Score =  583 bits (1503), Expect = e-164
 Identities = 276/324 (85%), Positives = 300/324 (92%), Gaps = 2/324 (0%)
 Frame = -3

Query: 1807 MAPAVTVDV-FTGTGKVATLNTGYSKRAYVTFLAGSGDYVKGVVGLAKGLRKVKSAYPLV 1631
            MAP V +D    GTGKV+T+NTGYSKRAYVTFLAG+GDYVKGVVGLAKGLRKVKSAYPLV
Sbjct: 1    MAPGVPIDGNILGTGKVSTVNTGYSKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLV 60

Query: 1630 VAMLPDVPEEHRKILRSQGCILKEIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKM 1451
            VA+LPDVPEEHR ILRSQGCI++EIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKM
Sbjct: 61   VAILPDVPEEHRDILRSQGCIVREIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKM 120

Query: 1450 VYLDADIQVFENIDHLFDTLNGYFYAVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPAEM 1271
            +YLDADIQVFENIDHLFDT +GYFYAVMDCFCEKTWSHSPQYSVGYCQQCP+K+TWPAEM
Sbjct: 121  IYLDADIQVFENIDHLFDTQDGYFYAVMDCFCEKTWSHSPQYSVGYCQQCPEKITWPAEM 180

Query: 1270 GSPPLLYFNAGMFVYEPSRLTFESLIENLRITAPTPFAEQDFLNKFFNHVYKPIPLVYNL 1091
            GSPP LYFNAGMFV+EPSRLT+ESL+E L+IT PTPFAEQDFLN FF   YKPIPL+YNL
Sbjct: 181  GSPPPLYFNAGMFVFEPSRLTYESLLERLQITPPTPFAEQDFLNMFFQKTYKPIPLLYNL 240

Query: 1090 VLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEANMDREDIKVLVAKWWEVYNDPSL 911
            VLAMLWRHPENVE+EKVKVVHYCAAGSKPWRYTGEEANMDREDIK+LVAKWW++YND SL
Sbjct: 241  VLAMLWRHPENVEVEKVKVVHYCAAGSKPWRYTGEEANMDREDIKMLVAKWWDIYNDESL 300

Query: 910  DFKADDSVTNRET-FSRPLLLASM 842
            DF  ++SV   ET FSR  +L+SM
Sbjct: 301  DFNGENSVPEEETIFSRSSILSSM 324


>gb|ACA04029.1| galactinol synthase 1 [Populus trichocarpa x Populus deltoides]
          Length = 338

 Score =  582 bits (1500), Expect = e-163
 Identities = 277/325 (85%), Positives = 301/325 (92%), Gaps = 3/325 (0%)
 Frame = -3

Query: 1807 MAPAVTVD--VFTGTGKVATLNTGYSKRAYVTFLAGSGDYVKGVVGLAKGLRKVKSAYPL 1634
            MAP V +D  +F GTGKV+T+NTGYSKRAYVTFLAG+GDYVKGVVGLAKGLRKVKSAYPL
Sbjct: 1    MAPGVPIDGNIF-GTGKVSTVNTGYSKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPL 59

Query: 1633 VVAMLPDVPEEHRKILRSQGCILKEIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSK 1454
            VVA+LPDVPEEHR ILRSQGCI++EIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSK
Sbjct: 60   VVAILPDVPEEHRDILRSQGCIVREIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSK 119

Query: 1453 MVYLDADIQVFENIDHLFDTLNGYFYAVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPAE 1274
            M+YLDADIQVFENIDHLFDT +GYFYAVMDCFCEKTWSHSPQYSVGYCQQCP+K+TWPAE
Sbjct: 120  MIYLDADIQVFENIDHLFDTQDGYFYAVMDCFCEKTWSHSPQYSVGYCQQCPEKITWPAE 179

Query: 1273 MGSPPLLYFNAGMFVYEPSRLTFESLIENLRITAPTPFAEQDFLNKFFNHVYKPIPLVYN 1094
            MGSPP LYFNAGMFV+EPSRLT+ESL+E L+IT PTPFAEQDFLN FF   YKPIPL+YN
Sbjct: 180  MGSPPPLYFNAGMFVFEPSRLTYESLLERLQITPPTPFAEQDFLNMFFQKTYKPIPLLYN 239

Query: 1093 LVLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEANMDREDIKVLVAKWWEVYNDPS 914
            LVLAMLWRHPENVE+EKVKVVHYCAAGSKPWRYTGEEANMDREDIK+LVAKWW++YND S
Sbjct: 240  LVLAMLWRHPENVEVEKVKVVHYCAAGSKPWRYTGEEANMDREDIKMLVAKWWDIYNDES 299

Query: 913  LDFKADDSVTNRET-FSRPLLLASM 842
            LDF  ++SV   ET FSR  +L SM
Sbjct: 300  LDFNGENSVPEEETIFSRSSILFSM 324


>gb|ACA04028.1| galactinol synthase 1 [Populus trichocarpa x Populus deltoides]
          Length = 338

 Score =  582 bits (1499), Expect = e-163
 Identities = 275/324 (84%), Positives = 299/324 (92%), Gaps = 2/324 (0%)
 Frame = -3

Query: 1807 MAPAVTVDV-FTGTGKVATLNTGYSKRAYVTFLAGSGDYVKGVVGLAKGLRKVKSAYPLV 1631
            MAP V +D    GTGKV+T+NTGYSKRAYVTFLAG+GDYVKGVVGLAKGLRKVKSAYPLV
Sbjct: 1    MAPGVPIDGNILGTGKVSTVNTGYSKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLV 60

Query: 1630 VAMLPDVPEEHRKILRSQGCILKEIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKM 1451
            VA+LPDVPEEHR ILRSQGCI++EIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKM
Sbjct: 61   VAILPDVPEEHRDILRSQGCIVREIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKM 120

Query: 1450 VYLDADIQVFENIDHLFDTLNGYFYAVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPAEM 1271
            +YLDADIQVFENIDHLFDT +GYFYAVMDCFCEKTWSHSPQYSVGYCQQCP+K+TWPAEM
Sbjct: 121  IYLDADIQVFENIDHLFDTQDGYFYAVMDCFCEKTWSHSPQYSVGYCQQCPEKITWPAEM 180

Query: 1270 GSPPLLYFNAGMFVYEPSRLTFESLIENLRITAPTPFAEQDFLNKFFNHVYKPIPLVYNL 1091
            GSPP LYFNAGMFV+EPSRLT+ESL+E L+IT PTPFAEQDFLN FF   YKPIPL+YNL
Sbjct: 181  GSPPPLYFNAGMFVFEPSRLTYESLLERLQITPPTPFAEQDFLNMFFQKTYKPIPLLYNL 240

Query: 1090 VLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEANMDREDIKVLVAKWWEVYNDPSL 911
            VLAMLWRHPENVE+EKVKVVHYCAAGSKPWRYTGEEANMDREDIK+LVAKWW++YND SL
Sbjct: 241  VLAMLWRHPENVEVEKVKVVHYCAAGSKPWRYTGEEANMDREDIKMLVAKWWDIYNDESL 300

Query: 910  DFKADDSVTNRET-FSRPLLLASM 842
            DF  ++S    ET FSR  +L+SM
Sbjct: 301  DFNGENSAPEEETIFSRSSILSSM 324


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