BLASTX nr result

ID: Coptis24_contig00001269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001269
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329780.1| predicted protein [Populus trichocarpa] gi|2...   384   e-110
ref|XP_002305797.1| predicted protein [Populus trichocarpa] gi|2...   381   e-109
dbj|BAJ92898.1| predicted protein [Hordeum vulgare subsp. vulgare]    382   e-108
dbj|BAJ89855.1| predicted protein [Hordeum vulgare subsp. vulgare]    382   e-108
gb|EEC79737.1| hypothetical protein OsI_21076 [Oryza sativa Indi...   380   e-108

>ref|XP_002329780.1| predicted protein [Populus trichocarpa] gi|222870842|gb|EEF07973.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  384 bits (986), Expect(2) = e-110
 Identities = 185/198 (93%), Positives = 193/198 (97%)
 Frame = -3

Query: 859 KEFETAYSASFYPCMDILYECYEDVACGSEIRSVVLAGRRFYEKDGLPAFPMGKIDQTRM 680
           KEFETAYSASFYPCMDILYECYEDVA GSEIRSVVLAGRRFYEK+GLPAFPMGKIDQTRM
Sbjct: 310 KEFETAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRM 369

Query: 679 WKVGEKVRSTRPEGDLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSL 500
           WKVGE+VR+ RP GDLGPLHPFTAGVYVALMMAQIE+LRKKGHSYSEIINES+IESVDSL
Sbjct: 370 WKVGERVRAARPAGDLGPLHPFTAGVYVALMMAQIEILRKKGHSYSEIINESLIESVDSL 429

Query: 499 NPFMHARGVSFMVDNCSTTARMGSRKWAPRFDYILTQQALVAVDKSAPINQDLISNFFSD 320
           NPFMHARGVSFMVDNCSTTAR+GSRKWAPRFDYILTQQALVAVD S PIN+DLISNFFSD
Sbjct: 430 NPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDNSTPINRDLISNFFSD 489

Query: 319 PVHGAIEVCAQLRPTVDI 266
           PVHGA+EVCAQLRPTVDI
Sbjct: 490 PVHGAVEVCAQLRPTVDI 507



 Score = 40.4 bits (93), Expect(2) = e-110
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = -1

Query: 210 LRPTVDISVPQDADFVRAELR 148
           LRPTVDISVP DADFVR ELR
Sbjct: 501 LRPTVDISVPADADFVRPELR 521


>ref|XP_002305797.1| predicted protein [Populus trichocarpa] gi|222848761|gb|EEE86308.1|
           predicted protein [Populus trichocarpa]
          Length = 589

 Score =  381 bits (978), Expect(2) = e-109
 Identities = 183/198 (92%), Positives = 192/198 (96%)
 Frame = -3

Query: 859 KEFETAYSASFYPCMDILYECYEDVACGSEIRSVVLAGRRFYEKDGLPAFPMGKIDQTRM 680
           KEFETAYSASFYPCMDILYECYEDVA GSEIRSVVLAGRRFYEK+GLP FPMGKIDQTRM
Sbjct: 374 KEFETAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPDFPMGKIDQTRM 433

Query: 679 WKVGEKVRSTRPEGDLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSL 500
           WKVGE+VR+TRP GDLGPLHPFTAGVYVALMMAQIE+LRKKGHSYSEIINES+IESVDSL
Sbjct: 434 WKVGERVRATRPAGDLGPLHPFTAGVYVALMMAQIEILRKKGHSYSEIINESLIESVDSL 493

Query: 499 NPFMHARGVSFMVDNCSTTARMGSRKWAPRFDYILTQQALVAVDKSAPINQDLISNFFSD 320
           NPFMHARGVSFMVDNCSTTAR+GSRKWAPRFDYI+TQQALVAVD   PIN+DLISNFFSD
Sbjct: 494 NPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYIVTQQALVAVDNGTPINRDLISNFFSD 553

Query: 319 PVHGAIEVCAQLRPTVDI 266
           PVHGA+EVCAQLRPTVDI
Sbjct: 554 PVHGAVEVCAQLRPTVDI 571



 Score = 40.4 bits (93), Expect(2) = e-109
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = -1

Query: 210 LRPTVDISVPQDADFVRAELR 148
           LRPTVDISVP DADFVR ELR
Sbjct: 565 LRPTVDISVPPDADFVRPELR 585


>dbj|BAJ92898.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 577

 Score =  382 bits (980), Expect(2) = e-108
 Identities = 185/198 (93%), Positives = 191/198 (96%)
 Frame = -3

Query: 859 KEFETAYSASFYPCMDILYECYEDVACGSEIRSVVLAGRRFYEKDGLPAFPMGKIDQTRM 680
           KEF  AYSASFYPCMDILYECYEDVA GSEIRSVVLAGRRFY+K+GLPAFPMGKIDQTRM
Sbjct: 363 KEFNKAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFYDKEGLPAFPMGKIDQTRM 422

Query: 679 WKVGEKVRSTRPEGDLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSL 500
           WKVGEKVRSTRP+GDLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSL
Sbjct: 423 WKVGEKVRSTRPDGDLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSL 482

Query: 499 NPFMHARGVSFMVDNCSTTARMGSRKWAPRFDYILTQQALVAVDKSAPINQDLISNFFSD 320
           NPFMHARGV+FMVDNCSTTAR+GSRKWAPRFDYILTQQA V VDK APINQDLISNF SD
Sbjct: 483 NPFMHARGVAFMVDNCSTTARLGSRKWAPRFDYILTQQAFVTVDKDAPINQDLISNFMSD 542

Query: 319 PVHGAIEVCAQLRPTVDI 266
           PVHGAIEVCA+LRPTVDI
Sbjct: 543 PVHGAIEVCAELRPTVDI 560



 Score = 37.4 bits (85), Expect(2) = e-108
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = -1

Query: 210 LRPTVDISVPQDADFVRAELR 148
           LRPTVDISV  DADFVR ELR
Sbjct: 554 LRPTVDISVTADADFVRPELR 574


>dbj|BAJ89855.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 577

 Score =  382 bits (980), Expect(2) = e-108
 Identities = 185/198 (93%), Positives = 191/198 (96%)
 Frame = -3

Query: 859 KEFETAYSASFYPCMDILYECYEDVACGSEIRSVVLAGRRFYEKDGLPAFPMGKIDQTRM 680
           KEF  AYSASFYPCMDILYECYEDVA GSEIRSVVLAGRRFY+K+GLPAFPMGKIDQTRM
Sbjct: 363 KEFNKAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFYDKEGLPAFPMGKIDQTRM 422

Query: 679 WKVGEKVRSTRPEGDLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSL 500
           WKVGEKVRSTRP+GDLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSL
Sbjct: 423 WKVGEKVRSTRPDGDLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSL 482

Query: 499 NPFMHARGVSFMVDNCSTTARMGSRKWAPRFDYILTQQALVAVDKSAPINQDLISNFFSD 320
           NPFMHARGV+FMVDNCSTTAR+GSRKWAPRFDYILTQQA V VDK APINQDLISNF SD
Sbjct: 483 NPFMHARGVAFMVDNCSTTARLGSRKWAPRFDYILTQQAFVTVDKDAPINQDLISNFMSD 542

Query: 319 PVHGAIEVCAQLRPTVDI 266
           PVHGAIEVCA+LRPTVDI
Sbjct: 543 PVHGAIEVCAELRPTVDI 560



 Score = 37.4 bits (85), Expect(2) = e-108
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = -1

Query: 210 LRPTVDISVPQDADFVRAELR 148
           LRPTVDISV  DADFVR ELR
Sbjct: 554 LRPTVDISVTADADFVRPELR 574


>gb|EEC79737.1| hypothetical protein OsI_21076 [Oryza sativa Indica Group]
          Length = 578

 Score =  380 bits (975), Expect(2) = e-108
 Identities = 185/198 (93%), Positives = 189/198 (95%)
 Frame = -3

Query: 859 KEFETAYSASFYPCMDILYECYEDVACGSEIRSVVLAGRRFYEKDGLPAFPMGKIDQTRM 680
           KEF  AYSASFYPCMDILYECYEDVA GSEIRSVVLAGRRFYEK+GLPAFPMG IDQTRM
Sbjct: 364 KEFNKAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRM 423

Query: 679 WKVGEKVRSTRPEGDLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSL 500
           WKVGEKVRSTRPE DLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSL
Sbjct: 424 WKVGEKVRSTRPENDLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSL 483

Query: 499 NPFMHARGVSFMVDNCSTTARMGSRKWAPRFDYILTQQALVAVDKSAPINQDLISNFFSD 320
           NPFMHARGV+FMVDNCSTTAR+GSRKWAPRFDYILTQQA V VDK APINQDLISNF SD
Sbjct: 484 NPFMHARGVAFMVDNCSTTARLGSRKWAPRFDYILTQQAFVTVDKDAPINQDLISNFMSD 543

Query: 319 PVHGAIEVCAQLRPTVDI 266
           PVHGAIEVCA+LRPTVDI
Sbjct: 544 PVHGAIEVCAELRPTVDI 561



 Score = 38.5 bits (88), Expect(2) = e-108
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = -1

Query: 210 LRPTVDISVPQDADFVRAELR 148
           LRPTVDISVP +ADFVR ELR
Sbjct: 555 LRPTVDISVPANADFVRPELR 575


Top