BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001232
         (1461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    99   4e-18
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...    98   5e-18
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    92   4e-16
ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302...    91   6e-16
emb|CAB45993.1| ATP-dependent RNA helicase like protein [Arabido...    91   6e-16

>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score = 98.6 bits (244), Expect = 4e-18
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = +2

Query: 2   RTARAGQAGRCFTLLRKHEVKRFKKLLQKADHNTCSVYPIAADSIESLRPEYTSALEKLK 181
           RTARAGQ+GRCFTLLRK EVKRFKKLLQKAD+++C V+ + + SIE L+P Y SALEKLK
Sbjct: 426 RTARAGQSGRCFTLLRKDEVKRFKKLLQKADNDSCPVHNLPSSSIEFLQPTYVSALEKLK 485

Query: 182 KCVESET 202
           + VESET
Sbjct: 486 EKVESET 492


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score = 98.2 bits (243), Expect = 5e-18
 Identities = 47/67 (70%), Positives = 56/67 (83%)
 Frame = +2

Query: 2   RTARAGQAGRCFTLLRKHEVKRFKKLLQKADHNTCSVYPIAADSIESLRPEYTSALEKLK 181
           RTARAGQ GRC TLLR HEVKRFKKLLQKAD+++C +Y I + S++SL P Y SALEKLK
Sbjct: 429 RTARAGQTGRCITLLRTHEVKRFKKLLQKADNDSCPIYSIPSSSVKSLHPFYLSALEKLK 488

Query: 182 KCVESET 202
           + V+SET
Sbjct: 489 ETVQSET 495


>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score = 91.7 bits (226), Expect = 4e-16
 Identities = 46/67 (68%), Positives = 55/67 (82%)
 Frame = +2

Query: 2   RTARAGQAGRCFTLLRKHEVKRFKKLLQKADHNTCSVYPIAADSIESLRPEYTSALEKLK 181
           RTARAGQ GRCFTLLRK E KRFK+LLQKAD ++C V+ +A++SIE+L   Y SALEKLK
Sbjct: 426 RTARAGQTGRCFTLLRKDEDKRFKQLLQKADSDSCPVHSVASNSIEALHSVYVSALEKLK 485

Query: 182 KCVESET 202
           + V SET
Sbjct: 486 ETVVSET 492


>ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
           gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 1
           gi|332658259|gb|AEE83659.1| RNA helicase 1 [Arabidopsis
           thaliana]
          Length = 522

 Score = 91.3 bits (225), Expect = 6e-16
 Identities = 43/66 (65%), Positives = 52/66 (78%)
 Frame = +2

Query: 2   RTARAGQAGRCFTLLRKHEVKRFKKLLQKADHNTCSVYPIAADSIESLRPEYTSALEKLK 181
           RTARAGQAGRCFTLL  HEV+RF KLL+K   ++C +YPI   S++S+R  YT ALEKLK
Sbjct: 428 RTARAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATYTPALEKLK 487

Query: 182 KCVESE 199
           + VESE
Sbjct: 488 ELVESE 493


>emb|CAB45993.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana]
           gi|7268333|emb|CAB78627.1| ATP-dependent RNA helicase
           like protein [Arabidopsis thaliana]
          Length = 474

 Score = 91.3 bits (225), Expect = 6e-16
 Identities = 43/66 (65%), Positives = 52/66 (78%)
 Frame = +2

Query: 2   RTARAGQAGRCFTLLRKHEVKRFKKLLQKADHNTCSVYPIAADSIESLRPEYTSALEKLK 181
           RTARAGQAGRCFTLL  HEV+RF KLL+K   ++C +YPI   S++S+R  YT ALEKLK
Sbjct: 380 RTARAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATYTPALEKLK 439

Query: 182 KCVESE 199
           + VESE
Sbjct: 440 ELVESE 445