BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001208
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002458416.1| hypothetical protein SORBIDRAFT_03g033090 [S...   308   9e-82
ref|NP_001151765.1| LOC100285400 [Zea mays] gi|194708402|gb|ACF8...   308   2e-81
gb|ACG35238.1| NADH-ubiquinone oxidoreductase 20 kDa subunit [Ze...   307   2e-81
ref|NP_001131270.1| NADH-ubiquinone oxidoreductase subunit [Zea ...   306   3e-81
ref|XP_002440129.1| hypothetical protein SORBIDRAFT_09g026580 [S...   306   6e-81

>ref|XP_002458416.1| hypothetical protein SORBIDRAFT_03g033090 [Sorghum bicolor]
           gi|241930391|gb|EES03536.1| hypothetical protein
           SORBIDRAFT_03g033090 [Sorghum bicolor]
          Length = 200

 Score =  308 bits (790), Expect = 9e-82
 Identities = 157/208 (75%), Positives = 166/208 (79%), Gaps = 7/208 (3%)
 Frame = +2

Query: 14  MALSLPKTARLSQLTTQ-------IRSLSTSSPAPYXXXXXXXXXXXXXGISKTAEYVVS 172
           MAL LP+TARL+ L+T            S++SPAPY              +SKTAE+VVS
Sbjct: 1   MAL-LPRTARLALLSTPRAYSAAAAAGASSTSPAPYGGAPPP-------AMSKTAEFVVS 52

Query: 173 KVDDLMNWARRGSIWPMTFGLACCAVEMMHAGAARYDFDRFGVIFRPSPRQSDCMIVAGT 352
           KVDDLMNWAR+GSIWPMTFGLACCAVEMMHAGA+RYDFDRFGVIFRPSPRQSDCMIVAGT
Sbjct: 53  KVDDLMNWARKGSIWPMTFGLACCAVEMMHAGASRYDFDRFGVIFRPSPRQSDCMIVAGT 112

Query: 353 LTNKMAPALRKVYDQMPEPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPP 532
           LTNKMAPALRKVYDQMPEPRWVISMGSCAN              CDRIVPVDIYVPGCPP
Sbjct: 113 LTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPP 172

Query: 533 TAEALLYGVLQLQKKINRRKDFLHWWTK 616
           TAEALLYGVLQLQKKINRRKDFLHWWTK
Sbjct: 173 TAEALLYGVLQLQKKINRRKDFLHWWTK 200


>ref|NP_001151765.1| LOC100285400 [Zea mays] gi|194708402|gb|ACF88285.1| unknown [Zea
           mays] gi|195621542|gb|ACG32601.1| NADH-ubiquinone
           oxidoreductase 20 kDa subunit [Zea mays]
           gi|195649579|gb|ACG44257.1| NADH-ubiquinone
           oxidoreductase 20 kDa subunit [Zea mays]
           gi|413951110|gb|AFW83759.1| NADH-ubiquinone
           oxidoreductase subunit [Zea mays]
           gi|413951113|gb|AFW83762.1| NADH-ubiquinone
           oxidoreductase subunit [Zea mays]
          Length = 200

 Score =  308 bits (788), Expect = 2e-81
 Identities = 157/208 (75%), Positives = 165/208 (79%), Gaps = 7/208 (3%)
 Frame = +2

Query: 14  MALSLPKTARLSQLTTQ-------IRSLSTSSPAPYXXXXXXXXXXXXXGISKTAEYVVS 172
           MAL LP+TARL+ L+T            S +SPAPY              +SKTAE+VVS
Sbjct: 1   MAL-LPRTARLALLSTPRAYSAAAAAGASPTSPAPYGGAPPP-------AMSKTAEFVVS 52

Query: 173 KVDDLMNWARRGSIWPMTFGLACCAVEMMHAGAARYDFDRFGVIFRPSPRQSDCMIVAGT 352
           KVDDLMNWAR+GSIWPMTFGLACCAVEMMHAGA+RYDFDRFGVIFRPSPRQSDCMIVAGT
Sbjct: 53  KVDDLMNWARKGSIWPMTFGLACCAVEMMHAGASRYDFDRFGVIFRPSPRQSDCMIVAGT 112

Query: 353 LTNKMAPALRKVYDQMPEPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPP 532
           LTNKMAPALRKVYDQMPEPRWVISMGSCAN              CDRIVPVDIYVPGCPP
Sbjct: 113 LTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPP 172

Query: 533 TAEALLYGVLQLQKKINRRKDFLHWWTK 616
           TAEALLYGVLQLQKKINRRKDFLHWWTK
Sbjct: 173 TAEALLYGVLQLQKKINRRKDFLHWWTK 200


>gb|ACG35238.1| NADH-ubiquinone oxidoreductase 20 kDa subunit [Zea mays]
          Length = 200

 Score =  307 bits (787), Expect = 2e-81
 Identities = 157/208 (75%), Positives = 165/208 (79%), Gaps = 7/208 (3%)
 Frame = +2

Query: 14  MALSLPKTARLSQLTTQ-------IRSLSTSSPAPYXXXXXXXXXXXXXGISKTAEYVVS 172
           MAL LP+TARL+ L+T            S +SPAPY              +SKTAE+VVS
Sbjct: 1   MAL-LPRTARLAFLSTPRSYSAAAAAGASPTSPAPYGGAPPP-------AMSKTAEFVVS 52

Query: 173 KVDDLMNWARRGSIWPMTFGLACCAVEMMHAGAARYDFDRFGVIFRPSPRQSDCMIVAGT 352
           KVDDLMNWAR+GSIWPMTFGLACCAVEMMHAGA+RYDFDRFGVIFRPSPRQSDCMIVAGT
Sbjct: 53  KVDDLMNWARKGSIWPMTFGLACCAVEMMHAGASRYDFDRFGVIFRPSPRQSDCMIVAGT 112

Query: 353 LTNKMAPALRKVYDQMPEPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPP 532
           LTNKMAPALRKVYDQMPEPRWVISMGSCAN              CDRIVPVDIYVPGCPP
Sbjct: 113 LTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPP 172

Query: 533 TAEALLYGVLQLQKKINRRKDFLHWWTK 616
           TAEALLYGVLQLQKKINRRKDFLHWWTK
Sbjct: 173 TAEALLYGVLQLQKKINRRKDFLHWWTK 200


>ref|NP_001131270.1| NADH-ubiquinone oxidoreductase subunit [Zea mays]
           gi|194691040|gb|ACF79604.1| unknown [Zea mays]
           gi|195641534|gb|ACG40235.1| NADH-ubiquinone
           oxidoreductase 20 kDa subunit [Zea mays]
           gi|414880711|tpg|DAA57842.1| TPA: NADH-ubiquinone
           oxidoreductase subunit [Zea mays]
          Length = 202

 Score =  306 bits (785), Expect = 3e-81
 Identities = 157/210 (74%), Positives = 165/210 (78%), Gaps = 9/210 (4%)
 Frame = +2

Query: 14  MALSLPKTARLSQLTTQ---------IRSLSTSSPAPYXXXXXXXXXXXXXGISKTAEYV 166
           MAL LP+TARL+ L+T              S +SPAPY              +SKTAE+V
Sbjct: 1   MAL-LPRTARLAFLSTPRSYSAAAAAAAGASPTSPAPYGGAPPP-------AMSKTAEFV 52

Query: 167 VSKVDDLMNWARRGSIWPMTFGLACCAVEMMHAGAARYDFDRFGVIFRPSPRQSDCMIVA 346
           VSKVDDLMNWAR+GSIWPMTFGLACCAVEMMHAGA+RYDFDRFGVIFRPSPRQSDCMIVA
Sbjct: 53  VSKVDDLMNWARKGSIWPMTFGLACCAVEMMHAGASRYDFDRFGVIFRPSPRQSDCMIVA 112

Query: 347 GTLTNKMAPALRKVYDQMPEPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 526
           GTLTNKMAPALRKVYDQMPEPRWVISMGSCAN              CDRIVPVDIYVPGC
Sbjct: 113 GTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGC 172

Query: 527 PPTAEALLYGVLQLQKKINRRKDFLHWWTK 616
           PPTAEALLYGVLQLQKKINRRKDFLHWWTK
Sbjct: 173 PPTAEALLYGVLQLQKKINRRKDFLHWWTK 202


>ref|XP_002440129.1| hypothetical protein SORBIDRAFT_09g026580 [Sorghum bicolor]
           gi|241945414|gb|EES18559.1| hypothetical protein
           SORBIDRAFT_09g026580 [Sorghum bicolor]
          Length = 202

 Score =  306 bits (783), Expect = 6e-81
 Identities = 156/207 (75%), Positives = 164/207 (79%), Gaps = 6/207 (2%)
 Frame = +2

Query: 14  MALSLPKTARLSQLTTQIRSLSTSS------PAPYXXXXXXXXXXXXXGISKTAEYVVSK 175
           MAL LP+TARL+ L    R+ S+SS      PAPY               SK AE+VVSK
Sbjct: 1   MAL-LPRTARLALLPASSRAYSSSSAAGSPRPAPYGGAAPLPPALA----SKAAEFVVSK 55

Query: 176 VDDLMNWARRGSIWPMTFGLACCAVEMMHAGAARYDFDRFGVIFRPSPRQSDCMIVAGTL 355
           VDDLMNWARRGSIWPMTFGLACCAVEMMHAGA+RYDFDRFG+IFRPSPRQSDCMIVAGTL
Sbjct: 56  VDDLMNWARRGSIWPMTFGLACCAVEMMHAGASRYDFDRFGLIFRPSPRQSDCMIVAGTL 115

Query: 356 TNKMAPALRKVYDQMPEPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPT 535
           TNKMAPALR+VYDQMPEPRWVISMGSCAN              CDRIVPVDIYVPGCPPT
Sbjct: 116 TNKMAPALRRVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPT 175

Query: 536 AEALLYGVLQLQKKINRRKDFLHWWTK 616
           AEALLYGVLQLQKKINRRKDFLHWWTK
Sbjct: 176 AEALLYGVLQLQKKINRRKDFLHWWTK 202