BLASTX nr result
ID: Coptis24_contig00001184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00001184
(788 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002298026.1| predicted protein [Populus trichocarpa] gi|2... 122 9e-26
emb|CAZ40339.1| putative aminopeptidase [Raphanus sativus] 122 1e-25
ref|XP_002304505.1| predicted protein [Populus trichocarpa] gi|2... 118 2e-24
gb|ABK95575.1| unknown [Populus trichocarpa] 118 2e-24
ref|XP_001772344.1| predicted protein [Physcomitrella patens sub... 82 7e-24
>ref|XP_002298026.1| predicted protein [Populus trichocarpa] gi|222845284|gb|EEE82831.1|
predicted protein [Populus trichocarpa]
Length = 918
Score = 122 bits (306), Expect = 9e-26
Identities = 71/142 (50%), Positives = 85/142 (59%)
Frame = +3
Query: 231 RTVRRDSTGSPSLA*KVTAKIGDGEIMDMMEVADPDAVHAVSSFIRKLLASEMKAEFLST 410
R++ DS K G+GEIMDMMEVADPDAVHAV SFIRK LASE+KAEFL T
Sbjct: 647 RSILSDSNLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRSFIRKQLASELKAEFLRT 706
Query: 411 VENNRSTEPYIFDHANISRRALKNISLGDSPRVLFV*DGCKKTCYAIKYII*LPGFVPCI 590
VENNRS+E Y+F+H N++RRALKNI+L
Sbjct: 707 VENNRSSEEYVFNHPNMARRALKNIAL--------------------------------- 733
Query: 591 AYLASLEDPDIVKLFSHEYKSA 656
AYLASLED ++ +L HEYK+A
Sbjct: 734 AYLASLEDQELTELALHEYKTA 755
Score = 76.3 bits (186), Expect = 7e-12
Identities = 38/58 (65%), Positives = 42/58 (72%)
Frame = +2
Query: 2 DEFNRWEAGQVLARKLMLNLVADFQQNKSLVLNPEFLHGXXXXXXXXXXXXEFIAKVL 175
DEFNRWEAGQVLARKLML+LVADFQQ K LVLNP+F+ G EFIAK +
Sbjct: 607 DEFNRWEAGQVLARKLMLSLVADFQQGKPLVLNPKFVQGLRSILSDSNLDKEFIAKAI 664
>emb|CAZ40339.1| putative aminopeptidase [Raphanus sativus]
Length = 886
Score = 122 bits (305), Expect = 1e-25
Identities = 76/148 (51%), Positives = 87/148 (58%), Gaps = 7/148 (4%)
Frame = +3
Query: 234 TVRRDSTGSPSLA*KVTAKIGDGEIMDMMEVADPDAVHAVSSFIRKLLASEMKAEFLSTV 413
+V DS+ K G+GEIMDMM VADPDAVHAV F+RK LASE+K E L V
Sbjct: 567 SVLSDSSLDKEFIAKAITLPGEGEIMDMMAVADPDAVHAVRKFVRKQLASELKTELLKIV 626
Query: 414 ENNRSTEPYIFDHANISRRALKNISLGDSPRV-------LFV*DGCKKTCYAIKYII*LP 572
ENNRSTE Y+FDH N++RRALKN +LG RV LFV C I+
Sbjct: 627 ENNRSTEAYVFDHPNMARRALKNTALGWHLRVIIKLNESLFVRKSLTSLCVCFVEIM--- 683
Query: 573 GFVPCIAYLASLEDPDIVKLFSHEYKSA 656
AYLASLEDP V+L EYKSA
Sbjct: 684 -----PAYLASLEDPAYVELALGEYKSA 706
Score = 79.7 bits (195), Expect = 7e-13
Identities = 39/58 (67%), Positives = 43/58 (74%)
Frame = +2
Query: 2 DEFNRWEAGQVLARKLMLNLVADFQQNKSLVLNPEFLHGXXXXXXXXXXXXEFIAKVL 175
DEFNRWEAGQVLARKLMLNLV+DFQQNK LVLNP+F+ G EFIAK +
Sbjct: 526 DEFNRWEAGQVLARKLMLNLVSDFQQNKPLVLNPKFIQGLGSVLSDSSLDKEFIAKAI 583
>ref|XP_002304505.1| predicted protein [Populus trichocarpa] gi|222841937|gb|EEE79484.1|
predicted protein [Populus trichocarpa]
Length = 950
Score = 118 bits (295), Expect = 2e-24
Identities = 69/142 (48%), Positives = 86/142 (60%)
Frame = +3
Query: 231 RTVRRDSTGSPSLA*KVTAKIGDGEIMDMMEVADPDAVHAVSSFIRKLLASEMKAEFLST 410
R++ DS+ K G+GEIMDMMEVADPDAVHAV SFIRK LASE+KA+FLS
Sbjct: 679 RSILCDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRSFIRKQLASELKADFLSL 738
Query: 411 VENNRSTEPYIFDHANISRRALKNISLGDSPRVLFV*DGCKKTCYAIKYII*LPGFVPCI 590
VENNRS+E Y+F++ N++RRALKNI+L
Sbjct: 739 VENNRSSEEYVFNYPNMARRALKNIAL--------------------------------- 765
Query: 591 AYLASLEDPDIVKLFSHEYKSA 656
AYLASLED ++ +L HEYK+A
Sbjct: 766 AYLASLEDQELTELALHEYKTA 787
Score = 73.6 bits (179), Expect = 5e-11
Identities = 36/58 (62%), Positives = 41/58 (70%)
Frame = +2
Query: 2 DEFNRWEAGQVLARKLMLNLVADFQQNKSLVLNPEFLHGXXXXXXXXXXXXEFIAKVL 175
D+FNRWEAGQVLARKLML+LV DFQQ K LVLNP+F+ G EFIAK +
Sbjct: 639 DDFNRWEAGQVLARKLMLSLVVDFQQGKPLVLNPKFVQGLRSILCDSSLDKEFIAKAI 696
>gb|ABK95575.1| unknown [Populus trichocarpa]
Length = 481
Score = 118 bits (295), Expect = 2e-24
Identities = 69/142 (48%), Positives = 86/142 (60%)
Frame = +3
Query: 231 RTVRRDSTGSPSLA*KVTAKIGDGEIMDMMEVADPDAVHAVSSFIRKLLASEMKAEFLST 410
R++ DS+ K G+GEIMDMMEVADPDAVHAV SFIRK LASE+KA+FLS
Sbjct: 210 RSILCDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRSFIRKQLASELKADFLSL 269
Query: 411 VENNRSTEPYIFDHANISRRALKNISLGDSPRVLFV*DGCKKTCYAIKYII*LPGFVPCI 590
VENNRS+E Y+F++ N++RRALKNI+L
Sbjct: 270 VENNRSSEEYVFNYPNMARRALKNIAL--------------------------------- 296
Query: 591 AYLASLEDPDIVKLFSHEYKSA 656
AYLASLED ++ +L HEYK+A
Sbjct: 297 AYLASLEDQELTELALHEYKTA 318
Score = 73.6 bits (179), Expect = 5e-11
Identities = 36/58 (62%), Positives = 41/58 (70%)
Frame = +2
Query: 2 DEFNRWEAGQVLARKLMLNLVADFQQNKSLVLNPEFLHGXXXXXXXXXXXXEFIAKVL 175
D+FNRWEAGQVLARKLML+LV DFQQ K LVLNP+F+ G EFIAK +
Sbjct: 170 DDFNRWEAGQVLARKLMLSLVVDFQQGKPLVLNPKFVQGLRSILCDSSLDKEFIAKAI 227
>ref|XP_001772344.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676331|gb|EDQ62815.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 888
Score = 82.0 bits (201), Expect(2) = 7e-24
Identities = 47/121 (38%), Positives = 66/121 (54%)
Frame = +3
Query: 294 GDGEIMDMMEVADPDAVHAVSSFIRKLLASEMKAEFLSTVENNRSTEPYIFDHANISRRA 473
G+ EI D+MEVADPDA+H V F+ K +A+ ++ E LSTVE NRS+ Y H + +RR+
Sbjct: 638 GESEIADLMEVADPDAIHTVRRFVIKQIAASLREELLSTVEENRSSAAYDPSHEHRARRS 697
Query: 474 LKNISLGDSPRVLFV*DGCKKTCYAIKYII*LPGFVPCIAYLASLEDPDIVKLFSHEYKS 653
LKNISL +Y+ASL +P+I +L +EYK+
Sbjct: 698 LKNISL---------------------------------SYMASLNEPEITELLVNEYKN 724
Query: 654 A 656
A
Sbjct: 725 A 725
Score = 55.1 bits (131), Expect(2) = 7e-24
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +2
Query: 2 DEFNRWEAGQVLARKLMLNLVADFQQNKSLVLNPEFLHGXXXXXXXXXXXXEFIAKVL 175
D+FNRWEAGQ LARKLML+L++ Q+ + L +N F+ G EF+AK +
Sbjct: 577 DQFNRWEAGQTLARKLMLDLISKQQKGEELNVNSAFIEGIRSTVTNSSLDKEFVAKCM 634