BLASTX nr result

ID: Coptis24_contig00001180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001180
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBY10024.1| unnamed protein product [Oikopleura dioica]            57   5e-06
ref|XP_002115148.1| predicted protein [Trichoplax adhaerens] gi|...    57   7e-06

>emb|CBY10024.1| unnamed protein product [Oikopleura dioica]
          Length = 569

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 35/102 (34%), Positives = 51/102 (50%)
 Frame = -2

Query: 525 LTITFFIEATEFLVVNEKEFNEGIMKFQCVEERLTEDGGCPICFDALLNGVDLELLSCTH 346
           L I  F +A   +V++ +  N+  +     EE L  D  C IC + ++ G   + L C H
Sbjct: 250 LAIRTFRKALSDIVLSRRAINQLHLYTDATEEELANDSTCIICREEMVAGSSSKKLPCGH 309

Query: 345 MFHQD*VGTWFGSHDTCPMCRTVDVVFRRLSLRQIT*ASRDV 220
           +FH   + +WF    TCP CR +DV      LR  T A+RDV
Sbjct: 310 IFHAACLRSWFQRQQTCPTCR-LDV------LRARTPAARDV 344


>ref|XP_002115148.1| predicted protein [Trichoplax adhaerens]
           gi|190582531|gb|EDV22604.1| predicted protein
           [Trichoplax adhaerens]
          Length = 243

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
 Frame = -2

Query: 408 CPICFDALLNGVDLELLSCTHMFHQD*VGTWFGSHDTCPMCRT--VDVVFRRLSLRQIT 238
           CPIC +  L+G D+ +  C H FH+  V  WF  + TCP+C++  ++ VF++L + + T
Sbjct: 172 CPICLETFLSGEDIRITPCQHEFHKKCVDLWFEENYTCPLCKSNILEKVFKKLQIERTT 230


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