BLASTX nr result

ID: Coptis24_contig00001172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001172
         (1754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284674.1| PREDICTED: uncharacterized protein LOC100247...   360   9e-97
ref|XP_002308629.1| predicted protein [Populus trichocarpa] gi|2...   302   2e-79
ref|XP_002516598.1| conserved hypothetical protein [Ricinus comm...   297   5e-78
ref|XP_002324258.1| predicted protein [Populus trichocarpa] gi|2...   266   1e-68
ref|XP_002299638.1| predicted protein [Populus trichocarpa] gi|2...   255   3e-65

>ref|XP_002284674.1| PREDICTED: uncharacterized protein LOC100247517 [Vitis vinifera]
          Length = 411

 Score =  360 bits (923), Expect = 9e-97
 Identities = 209/416 (50%), Positives = 261/416 (62%), Gaps = 18/416 (4%)
 Frame = +1

Query: 136  MLRKRSRSVQKDQYKGHLIMSDSGSESNFQPEKLG---KNTSFFSVPGLFVGFSIKATSD 306
            MLRKRSRS QKDQ+ GH  M+D+ SE  FQ + +G   K  SFFSVPGLFVG + K  SD
Sbjct: 1    MLRKRSRSFQKDQHMGHPTMADAVSELYFQSDVMGQKHKGNSFFSVPGLFVGLNYKGLSD 60

Query: 307  YDSVRSPTSPLDFKLLTG---------NSRNGSPKSWDCSKVGLGIIDSLGDVKKSSEDV 459
             DSVRSPTSPLDF++ +          +S++G  KSWDCSKVGL IIDSL D  K S  V
Sbjct: 61   SDSVRSPTSPLDFRVFSNLGSPFRSPRSSQDGQHKSWDCSKVGLSIIDSLDDGGKLSGKV 120

Query: 460  VGLSSSRNILLGSQMRMNNFPSSQSRLYRSIDSSVAPKSLPNNYAIYPQPQSNDNLPGVQ 639
            +G S S+ IL G QMR+   P+S S +    D S   KSLP NYA +P  Q         
Sbjct: 121  LGSSESKTILFGPQMRIKT-PNSPSHI-NFFDGS---KSLPKNYASFPHTQIKSRPQK-- 173

Query: 640  FSGWNNSEITGEMHS---EPNLFGIVRSDLSYTSKSMSRLTGLGYCNNNLSSESFWSDNI 810
                 +S++  E+     EP  FG +RS    +S+S S LT L    +NLSS +    N+
Sbjct: 174  ----RDSDVVFEIEETPLEPEAFGRIRSCSLDSSRSFSSLTNLTKRQSNLSSGNLCPGNM 229

Query: 811  T---KSGFLLIGEEPMKVDNFLGMKXXXXXXXXXXXXXXXXXXTASEIELSEDYTCIISH 981
            T    S   ++G  P   DNFL MK                  +ASEIELSEDYTC+ISH
Sbjct: 230  TTQVSSPPQILGGNP-NPDNFLPMKLNSIPASVGSGQGLIGSLSASEIELSEDYTCVISH 288

Query: 982  GPNPRTTHIFGDCVLECHTNELADCATKEEPGIGTPKALKCSNSSLAYPSDDFLSFCYFC 1161
            GPNP+TTHI+GDC+LECH+N+LA+    +E  IG+P  ++CS++S  YPS+DFLS CY C
Sbjct: 289  GPNPKTTHIYGDCILECHSNDLANHNKNDEHKIGSPLIVECSDNSTPYPSNDFLSICYSC 348

Query: 1162 KKKLEEGNDIYMYRGEKAFCSSACRDQEILVEEEMDKPVINSSGESPKSTCSDDIF 1329
            KKKLEEG DIYMYRGEKAFCS  CR QEIL++EEM+K   +SS +SP S C +D+F
Sbjct: 349  KKKLEEGKDIYMYRGEKAFCSLNCRSQEILIDEEMEKTTDDSSEKSPVSKCGEDLF 404


>ref|XP_002308629.1| predicted protein [Populus trichocarpa] gi|222854605|gb|EEE92152.1|
            predicted protein [Populus trichocarpa]
          Length = 375

 Score =  302 bits (773), Expect = 2e-79
 Identities = 179/376 (47%), Positives = 229/376 (60%), Gaps = 14/376 (3%)
 Frame = +1

Query: 136  MLRKRSRSVQKDQYKGHLIMSDSGSESNFQPEKLGKN---TSFFSVPGLFVGFSIKATSD 306
            MLRKR+RS+QKDQ  G L MSDSGSES+FQ + +G N    SFF+VPGLFVG S+K  SD
Sbjct: 1    MLRKRTRSLQKDQQMGQLTMSDSGSESHFQSDNMGHNHKANSFFTVPGLFVGSSLKGLSD 60

Query: 307  YDSVRSPTSPLDFKLLTG---------NSRNGSPKSWDCSKVGLGIIDSLGDVKKSSEDV 459
             DSVRSPTSPLDF++ +          +S  G  KSWDC+KVGL I+DSL D  K S  V
Sbjct: 61   CDSVRSPTSPLDFRMFSNIGNPSKSPRSSHGGQRKSWDCNKVGLSIVDSLDDDGKGSGKV 120

Query: 460  VGLSSSRNILLGSQMRMNNFPSSQSRLYRSIDSSVAPKSLPNNYAIYPQPQSNDNLPGVQ 639
            +  S S+NIL G ++R    P+ QSR     DS  APKSLP N+AI+P+  +    P ++
Sbjct: 121  LRSSESKNILFGPRVRSKT-PNFQSRT----DSFQAPKSLPRNFAIFPRTLTKS--PLLK 173

Query: 640  FSGWNNSEITGEMHSEPNLFGIVRSDLSYTSKSMSRLTGLGYCNNNLSSESFWSDNITKS 819
             S     EI GE  S+   FG +RS    + +S S L+ L   N+  SS +F  DN+T  
Sbjct: 174  GSSDVLFEI-GEDPSDSEPFGKIRSCSLDSCRSFSSLSRLAGQNSKASSGNFCLDNVTTR 232

Query: 820  GFL--LIGEEPMKVDNFLGMKXXXXXXXXXXXXXXXXXXTASEIELSEDYTCIISHGPNP 993
            G    L G  P   +NF                      +ASEIELSEDYTC+ISHGPNP
Sbjct: 233  GECPQLFGGSPNS-NNFSNTNLTFTPMSVSSGNGFIGSLSASEIELSEDYTCVISHGPNP 291

Query: 994  RTTHIFGDCVLECHTNELADCATKEEPGIGTPKALKCSNSSLAYPSDDFLSFCYFCKKKL 1173
            +TTHI+GDC+LEC +N+L++    E   IG P+A+ CS    ++PS+ FLSFCY+C KKL
Sbjct: 292  KTTHIYGDCILECQSNDLSNFGKNEAKEIGLPQAVTCSKIPGSFPSEVFLSFCYYCNKKL 351

Query: 1174 EEGNDIYMYRGEKAFC 1221
            +EG DIY+YR     C
Sbjct: 352  DEGKDIYIYRFVPVIC 367


>ref|XP_002516598.1| conserved hypothetical protein [Ricinus communis]
            gi|223544418|gb|EEF45939.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 435

 Score =  297 bits (761), Expect = 5e-78
 Identities = 184/416 (44%), Positives = 244/416 (58%), Gaps = 20/416 (4%)
 Frame = +1

Query: 133  IMLRKRSRSVQKDQYKGHLIMSDSGSESNFQPEKLG---KNTSFFSVPGLFVGFSIKATS 303
            +MLRKR+RS+QKDQ  G L MSDSGS+ N Q + LG   K TSFF+VPGLFVG S K  S
Sbjct: 26   VMLRKRTRSLQKDQQMGPLTMSDSGSQFNSQSDCLGYNHKRTSFFNVPGLFVGLSPKGMS 85

Query: 304  DYDSVRSPTSPLDFKLLTG----------NSRNGSPKSWDCSKVGLGIIDSLGDVK---K 444
            D DSVRSPTSPLD +L +           +S+NG  KSWDCSKVGL I++SL D     K
Sbjct: 86   DCDSVRSPTSPLDLRLFSNLGNSSYRSPRSSQNGHQKSWDCSKVGLSIVNSLDDEDDDTK 145

Query: 445  SSEDVVGLSSSRNILLGSQMRMNNFPSSQSRLYRSIDSSVAPKSLPNNYAIYPQPQSNDN 624
             S  V+  S S+NIL G ++R+   P+ Q     + +S  APKSLP N+AI P   +  +
Sbjct: 146  VSGKVLRSSESKNILFGQKVRIKT-PTFQV----NANSFEAPKSLPRNFAILPHSYTKSS 200

Query: 625  LPGVQFSGWNNSEIT-GEMHSEPNLFGIVRSDLSYTSKSMSRLTGLGYCNNNLSSESFWS 801
            L      G +      GE  +EP  FG +RS    + KS S L+ L   N+N+   +F  
Sbjct: 201  LQ----KGCSKVIFEIGEAPTEPEHFGKIRSCSLDSCKSFSTLSRLANRNSNVICGNFPL 256

Query: 802  DNI---TKSGFLLIGEEPMKVDNFLGMKXXXXXXXXXXXXXXXXXXTASEIELSEDYTCI 972
            +N+   T S     G  P + +N L M                   +ASEIELSEDYTC+
Sbjct: 257  NNVATGTSSPLQFSGGSPPQSNNSLHMDLNLPPAGSTSGFVGSL--SASEIELSEDYTCV 314

Query: 973  ISHGPNPRTTHIFGDCVLECHTNELADCATKEEPGIGTPKALKCSNSSLAYPSDDFLSFC 1152
            ISHGPN + THI+GDCVLEC++NE  +        I  P+A+  S     +PS+DFL+FC
Sbjct: 315  ISHGPNAKKTHIYGDCVLECYSNEGKE--------IRMPQAITSSIIPSPFPSNDFLNFC 366

Query: 1153 YFCKKKLEEGNDIYMYRGEKAFCSSACRDQEILVEEEMDKPVINSSGESPKSTCSD 1320
            Y+C ++L+ G DIY+YRGEKAFCS +CR +EI+++EEM+K    +  E     C +
Sbjct: 367  YYCNRRLDGGKDIYIYRGEKAFCSLSCRSEEIMIDEEMEKTTNKTCDEPEPPKCDN 422


>ref|XP_002324258.1| predicted protein [Populus trichocarpa] gi|222865692|gb|EEF02823.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  266 bits (681), Expect = 1e-68
 Identities = 165/380 (43%), Positives = 215/380 (56%), Gaps = 25/380 (6%)
 Frame = +1

Query: 136  MLRKRSRSVQKDQYKGHLIMSDSGSESNFQPEK-LG---KNTSFFSVPGLFVGFSIKATS 303
            MLRKR+RS++KDQ  G L MSDSGSES FQP+  +G   K  SFF+VPGLFVG S K  S
Sbjct: 1    MLRKRTRSLKKDQQTGQLTMSDSGSESYFQPDNNMGHSHKANSFFTVPGLFVGLSHKGLS 60

Query: 304  DYDSVRSPTSPLDFKLLTG---------NSRNGSPKSWDCSKVGLGIIDSLGDVKKSSED 456
            D DSVRSPTSPLD ++ +          +S  G  KSWDC+KVGL I+DSL D     + 
Sbjct: 61   DCDSVRSPTSPLDSRMFSNIGNPHKSLRSSHGGQQKSWDCNKVGLSILDSLDDDDDDDDG 120

Query: 457  -----VVGLSSSRNILLGSQMRMNNFPSSQSRLYRSIDSSVAPKSLPNNYAIYPQPQSND 621
                 V+  S S+NIL G ++R     S  +      D   APKSLP N+AI+P+  +  
Sbjct: 121  KGYGKVLQSSESKNILFGPRVR-----SKTANFQSHTDPFQAPKSLPRNFAIFPRTLTKS 175

Query: 622  NLPGVQFSGWNNSEIT---GEMHSEPNLFGIVRSDLSYTSKSMSRLTGLGYCNNNLSSES 792
             L        ++S++    GE   E   FG +RS    + +S S ++ L   N   SS +
Sbjct: 176  PLQK------DSSDVLFEIGEGPFESETFGRIRSCSLDSCRSFSSMSRLAGQNLKASSLN 229

Query: 793  FWSDNITKS----GFLLIGEEPMKVDNFLGMKXXXXXXXXXXXXXXXXXXTASEIELSED 960
            F   NIT        LL G      +NF                      +ASEIELSED
Sbjct: 230  FSLHNITTQVDCPPQLLGGSS--NTNNFSNTNLTYTPMSASSGNGFISSLSASEIELSED 287

Query: 961  YTCIISHGPNPRTTHIFGDCVLECHTNELADCATKEEPGIGTPKALKCSNSSLAYPSDDF 1140
            YTC+ISHGPNP+TTHI+G C+LECH+N+ ++    +E  IG  +A  CS    ++PS+DF
Sbjct: 288  YTCVISHGPNPKTTHIYGGCILECHSNDFSNFGKNKEKEIGLAQAATCSKIPSSFPSEDF 347

Query: 1141 LSFCYFCKKKLEEGNDIYMY 1200
            LSFCY+C KKL+EG DIY+Y
Sbjct: 348  LSFCYYCNKKLDEGKDIYIY 367


>ref|XP_002299638.1| predicted protein [Populus trichocarpa] gi|222846896|gb|EEE84443.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  255 bits (651), Expect = 3e-65
 Identities = 159/398 (39%), Positives = 208/398 (52%), Gaps = 16/398 (4%)
 Frame = +1

Query: 193  MSDSGSESNFQPEKLGKN---TSFFSVPGLFVGFSIKATSDYDSVRSPTSPLDFKLLTGN 363
            M+DS +E+N QP+        +SFF++PG FVG   + + D+DSVRSP SPLDF   T  
Sbjct: 1    MADSDTETNSQPDTFSLRHLRSSFFNIPGFFVGCGYRGSQDFDSVRSPQSPLDFSFFTNL 60

Query: 364  SR---NGSP--------KSWDCSKVGLGIIDSLGDVKKSSEDVVGLSSSRNILLGSQMRM 510
            S    N SP        K WDC+KVGLGI+  L D  K + +V+     + I+   Q++ 
Sbjct: 61   SNPFSNRSPRLPCQNVQKKWDCNKVGLGIVHLLVDETKPTGEVLDSDKRKTIIFAPQVKT 120

Query: 511  NNFPSSQSRLYRSIDSSVAPKSLPNNYAIYPQPQSNDNLPGVQFSGWNNSEITGEMHSEP 690
                           SSV   SLP NY I        +L   + S     +  G   SE 
Sbjct: 121  F--------------SSVKSNSLPRNYTI--------SLSRTKTSSPRLGKSDGAFGSE- 157

Query: 691  NLFGIVRSDLSYTSKSMSRLTGLGYCNNNLSSESFWSDNITKS--GFLLIGEEPMKVDNF 864
               G++     + S S+    GL     NLSS+ F+S+NIT S   F L   +  + +  
Sbjct: 158  ---GVLLETKPFESSSV---IGLATSKPNLSSQKFYSENITTSTRSFPLEICDCSQTNKS 211

Query: 865  LGMKXXXXXXXXXXXXXXXXXXTASEIELSEDYTCIISHGPNPRTTHIFGDCVLECHTNE 1044
            L +K                  +A EIELSEDYTCIISHGPNP+TTH+FGD +LECH+NE
Sbjct: 212  LVIKPNSLPITVGSGQGYVGSLSAREIELSEDYTCIISHGPNPKTTHVFGDYILECHSNE 271

Query: 1045 LADCATKEEPGIGTPKALKCSNSSLAYPSDDFLSFCYFCKKKLEEGNDIYMYRGEKAFCS 1224
            L++    E PGI  P+  K       +P D+F SFCY CKKKLE+  DIYMYRGEK FCS
Sbjct: 272  LSNFDKTENPGIKLPQEAKHPKHPTPFPPDEFFSFCYSCKKKLEKAEDIYMYRGEKVFCS 331

Query: 1225 SACRDQEILVEEEMDKPVINSSGESPKSTCSDDIFLMV 1338
              C  +E   E E +K    SS  SP S+  +D+FLMV
Sbjct: 332  FDCHSEETFAERETEKTCNKSSKSSPGSSYHEDVFLMV 369


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