BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001159
         (1815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262...   342   3e-91
emb|CBI37628.3| unnamed protein product [Vitis vinifera]              327   6e-87
ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260...   321   5e-85
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm...   316   1e-83
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...   307   5e-81

>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
            gi|296081186|emb|CBI18212.3| unnamed protein product
            [Vitis vinifera]
          Length = 332

 Score =  342 bits (876), Expect = 3e-91
 Identities = 193/363 (53%), Positives = 236/363 (65%)
 Frame = +1

Query: 268  RSILRSSGVDIWSLIDTAISVASKDYENEIKERRDGIIERLYVPPVVSTRCQNCNRXXXX 447
            RSIL SSGVD+W+LI+TA+SVAS DY  E K RRD I+ERLY P V  +RC NC+R    
Sbjct: 7    RSILESSGVDVWTLIETAVSVASVDYSEEFKGRRDSIVERLYTPVV--SRCLNCDRDRIH 64

Query: 448  XXVGKFXXXXXXXXXXXXXXXXXGNNKDSPATPQSXXXXXXXXXXXXXXXXXXXXXXSYG 627
               G                     ++    TP+S                         
Sbjct: 65   KPNGDRSVKEKMDQL---------QDESWIETPESVERDRDG------------------ 97

Query: 628  RRTIDDEQIKILDIKDQLEDPHQSEDTLVNLLQELEDMDITFKALKETDIGRHVNLLRKH 807
              +ID+EQ KIL IK++LEDP Q ED+LV+LLQ L DMDITFKALKETDIGRHVN LRKH
Sbjct: 98   --SIDEEQSKILAIKERLEDPDQLEDSLVDLLQSLADMDITFKALKETDIGRHVNRLRKH 155

Query: 808  RSSEVRQMVKQVVRKWKYLVDAWVKGSSPGETAPSAFIADGDSPQQNPPRSNQNGHHQVP 987
             S+EVR++VKQ+VRKWK LVD WVK S+PGET  SA +ADGDSPQQN  +S  N HHQVP
Sbjct: 156  PSNEVRRLVKQLVRKWKDLVDEWVKLSTPGETTASAIVADGDSPQQNHLKSTSNVHHQVP 215

Query: 988  DFGYSPSPNTHNGSSGSDRNNSEPEPRKKVIPRREPVTQTRPSQSARVSNSPSIPNKLKE 1167
            DF YSP+P  HNGSSGSD+NN E EP++K +PRRE  T  +P+Q+  +  S ++ NK +E
Sbjct: 216  DFAYSPNP--HNGSSGSDKNNVELEPKRKAVPRRE--TPNKPNQTPPIPTSVAL-NKQRE 270

Query: 1168 PKNNAIDPERLASARKRLQDNYQEAQNAKKQRTIQVMDLHDIXXXXXXXXXXXXXXXXQA 1347
             K++ +D E+LASAR+RL +NYQEAQNAKKQRTIQVMD+HDI                QA
Sbjct: 271  QKDSLVDEEKLASARRRLHENYQEAQNAKKQRTIQVMDIHDI-PKPKNTFFAKNRGGVQA 329

Query: 1348 RHW 1356
            +HW
Sbjct: 330  KHW 332


>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  327 bits (838), Expect = 6e-87
 Identities = 186/343 (54%), Positives = 230/343 (67%), Gaps = 1/343 (0%)
 Frame = +1

Query: 268  RSILRSSGVDIWSLIDTAISVASKDYENEIKERRDGIIERLYVPPVVSTRCQNCNRXXXX 447
            R ILR+SGVD+W  I+TAISVA  DY +E++ RRDGI+ER+Y+    S+RC +CN     
Sbjct: 7    RLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYM----SSRCGSCNLRYQH 62

Query: 448  XXVGKFXXXXXXXXXXXXXXXXXGNNKD-SPATPQSXXXXXXXXXXXXXXXXXXXXXXSY 624
              + K                   + KD SP TPQS                       Y
Sbjct: 63   SGLDK--------GCDEEKEDEKDDEKDKSPLTPQSINRSGSEDR--------------Y 100

Query: 625  GRRTIDDEQIKILDIKDQLEDPHQSEDTLVNLLQELEDMDITFKALKETDIGRHVNLLRK 804
            G   +D+E+ +ILDIK+ LE P Q +D++V+LLQ L DMDITFKALKETDIGRHVN LRK
Sbjct: 101  GG-LLDEEEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRK 159

Query: 805  HRSSEVRQMVKQVVRKWKYLVDAWVKGSSPGETAPSAFIADGDSPQQNPPRSNQNGHHQV 984
            H S++VR++VK +VRKWK LVD WVK +  GE   SA +A+GDSP Q  PR+   GHHQV
Sbjct: 160  HPSNDVRRLVKHLVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSPPQKIPRT---GHHQV 216

Query: 985  PDFGYSPSPNTHNGSSGSDRNNSEPEPRKKVIPRREPVTQTRPSQSARVSNSPSIPNKLK 1164
            PDFGYSP+P   NGSSGSD+NN+EPEP+ K IPR+E    TRP+QSA VS+S   PNK  
Sbjct: 217  PDFGYSPNP--QNGSSGSDKNNAEPEPKVKAIPRKE--VPTRPAQSAPVSSSFPPPNK-- 270

Query: 1165 EPKNNAIDPERLASARKRLQDNYQEAQNAKKQRTIQVMDLHDI 1293
              ++ AIDP++ ASARKRL +NYQEAQNAKKQRTIQVMD+HDI
Sbjct: 271  -QRDTAIDPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDI 312


>ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
            vinifera]
          Length = 331

 Score =  321 bits (822), Expect = 5e-85
 Identities = 185/343 (53%), Positives = 229/343 (66%), Gaps = 1/343 (0%)
 Frame = +1

Query: 268  RSILRSSGVDIWSLIDTAISVASKDYENEIKERRDGIIERLYVPPVVSTRCQNCNRXXXX 447
            R ILR+SGVD+W  I+TAISVA  DY +E++ RRDGI+ER+Y+    S+RC +CN     
Sbjct: 7    RLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYM----SSRCGSCNLRYQH 62

Query: 448  XXVGKFXXXXXXXXXXXXXXXXXGNNKD-SPATPQSXXXXXXXXXXXXXXXXXXXXXXSY 624
              + K                   + KD SP TPQS                       Y
Sbjct: 63   SGLDK--------GCDEEKEDEKDDEKDKSPLTPQSINRSGSEDR--------------Y 100

Query: 625  GRRTIDDEQIKILDIKDQLEDPHQSEDTLVNLLQELEDMDITFKALKETDIGRHVNLLRK 804
            G   +D+E+ +ILDIK+ LE P Q +D++V+LLQ L DMDITFKALKETDIGRHVN LRK
Sbjct: 101  GG-LLDEEEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRK 159

Query: 805  HRSSEVRQMVKQVVRKWKYLVDAWVKGSSPGETAPSAFIADGDSPQQNPPRSNQNGHHQV 984
            H S++VR++VK +VRKWK LVD WVK +  GE   SA + +GDSP Q  PR+   GHHQV
Sbjct: 160  HPSNDVRRLVKHLVRKWKDLVDEWVKSNPAGEFTSSA-LMEGDSPPQKIPRT---GHHQV 215

Query: 985  PDFGYSPSPNTHNGSSGSDRNNSEPEPRKKVIPRREPVTQTRPSQSARVSNSPSIPNKLK 1164
            PDFGYSP+P   NGSSGSD+NN+EPEP+ K IPR+E    TRP+QSA VS+S   PNK  
Sbjct: 216  PDFGYSPNP--QNGSSGSDKNNAEPEPKVKAIPRKE--VPTRPAQSAPVSSSFPPPNK-- 269

Query: 1165 EPKNNAIDPERLASARKRLQDNYQEAQNAKKQRTIQVMDLHDI 1293
              ++ AIDP++ ASARKRL +NYQEAQNAKKQRTIQVMD+HDI
Sbjct: 270  -QRDTAIDPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDI 311


>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
            gi|223530431|gb|EEF32318.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 362

 Score =  316 bits (810), Expect = 1e-83
 Identities = 178/343 (51%), Positives = 218/343 (63%), Gaps = 1/343 (0%)
 Frame = +1

Query: 268  RSILRSSGVDIWSLIDTAISVASKDYENEIKERRDGIIERLYVPPVVSTRCQNCNRXXXX 447
            RSIL SSGVD+W+ IDTAI VAS D+ NE+K+RRD I+E LY     S RC+NC+     
Sbjct: 7    RSILESSGVDVWTFIDTAIVVASLDFGNELKQRRDKIVEMLYSS---SGRCRNCDLDVGR 63

Query: 448  XXVGKFXXXXXXXXXXXXXXXXXGNNKDSPATPQSXXXXXXXXXXXXXXXXXXXXXXSYG 627
               G                   G+   +P +                           G
Sbjct: 64   INNGHEIKERSHLESKGGGGGGSGSPSTTPRSIHGDEDVDVVNDDDDDDDDDDGLDPYAG 123

Query: 628  RRTIDDEQIKILDIKDQLEDPHQSEDTLVNLLQELEDMDITFKALKETDIGRHVNLLRKH 807
                DDEQ KIL+IK  LEDP QSED+LV+LLQ L DMDITFKALKETDIGRHVN LRKH
Sbjct: 124  --LFDDEQKKILEIKQHLEDPDQSEDSLVDLLQSLADMDITFKALKETDIGRHVNQLRKH 181

Query: 808  RSSEVRQMVKQVVRKWKYLVDAWVKGSSPGETAPSAFIADGDSPQQNPPRSNQNGHHQVP 987
             S++VR++VKQ+VRKWK +VD WVK + PG+ A S  +ADGDSP+Q  P   QNGHHQVP
Sbjct: 182  TSNDVRRLVKQLVRKWKDIVDEWVKLNPPGQHASSGLMADGDSPRQKFP---QNGHHQVP 238

Query: 988  DFGYSPSPNTHNGSSGSDRNNSEPEPRKKVIPRRE-PVTQTRPSQSARVSNSPSIPNKLK 1164
            DF YSP+P  HNGSSGSD+NNSEPE R K +PR+E P    + S     S S  +  + +
Sbjct: 239  DFAYSPNP--HNGSSGSDKNNSEPERRPKPVPRKEAPPRPAQQSVPVSASASHIVQRQRE 296

Query: 1165 EPKNNAIDPERLASARKRLQDNYQEAQNAKKQRTIQVMDLHDI 1293
            + + N  D +RLASARKRLQ NY+EA+NAKKQRTIQVMD+H++
Sbjct: 297  QQRENNFDSDRLASARKRLQANYKEAENAKKQRTIQVMDIHEL 339


>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
            subunit 26c-like [Cucumis sativus]
            gi|449528150|ref|XP_004171069.1| PREDICTED: probable
            mediator of RNA polymerase II transcription subunit
            26c-like [Cucumis sativus]
          Length = 345

 Score =  307 bits (787), Expect = 5e-81
 Identities = 171/343 (49%), Positives = 219/343 (63%), Gaps = 1/343 (0%)
 Frame = +1

Query: 268  RSILRSSGVDIWSLIDTAISVASKDYENEIKERRDGIIERLYVPPVVSTRCQNCNRXXXX 447
            R+IL ++GVD+W+ IDTA+ VAS DY N++K RRDGI+ERLY      +RC+NC+     
Sbjct: 10   RTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNCDTDRNH 69

Query: 448  XXVGKFXXXXXXXXXXXXXXXXXGNNKD-SPATPQSXXXXXXXXXXXXXXXXXXXXXXSY 624
                                   G  K+ SP+TPQ                         
Sbjct: 70   DGRSN----------GCEIKQGSGEVKEASPSTPQFVVVEGDDDGADPYAGL-------- 111

Query: 625  GRRTIDDEQIKILDIKDQLEDPHQSEDTLVNLLQELEDMDITFKALKETDIGRHVNLLRK 804
                 DDEQ K+L+IK+QLE P Q ED LV LLQ L DMDITF+ALKETDIGRHVN LRK
Sbjct: 112  ----FDDEQKKVLEIKEQLEIPQQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRK 167

Query: 805  HRSSEVRQMVKQVVRKWKYLVDAWVKGSSPGETAPSAFIADGDSPQQNPPRSNQNGHHQV 984
            H S++VR++VK +VRKWK +VD WV+ + PGE   +  +ADGDSPQQ  P   QNG+HQV
Sbjct: 168  HPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQT-ATLLADGDSPQQKAP---QNGYHQV 223

Query: 985  PDFGYSPSPNTHNGSSGSDRNNSEPEPRKKVIPRREPVTQTRPSQSARVSNSPSIPNKLK 1164
            PDF YSP+P  HNG SGSDRNNSEPEP+ K +PRR+ +   +P+Q A  S+      + +
Sbjct: 224  PDFAYSPNP--HNGGSGSDRNNSEPEPKGKSVPRRDAL--PKPTQQAPTSSLTPQNRQKE 279

Query: 1165 EPKNNAIDPERLASARKRLQDNYQEAQNAKKQRTIQVMDLHDI 1293
            + K    D ++LASARKRLQ+NY+EA+NAK+QRTIQVMD+H+I
Sbjct: 280  QQKEANFDSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEI 322