BLASTX nr result
ID: Coptis24_contig00001118
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00001118
(1045 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3... 289 4e-99
emb|CBI27547.3| unnamed protein product [Vitis vinifera] 289 4e-99
ref|XP_002315633.1| multidrug resistance protein ABC transporter... 290 4e-98
ref|XP_002312645.1| multidrug resistance protein ABC transporter... 283 5e-96
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6... 276 1e-93
>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
Length = 1462
Score = 289 bits (739), Expect(2) = 4e-99
Identities = 141/205 (68%), Positives = 162/205 (79%)
Frame = -3
Query: 1043 QGWVIWNICNVDNKMISVERILQFSSIQSEAPLTIVGCTPDPDWLMSGTIDIDNLHVQYS 864
Q WVIWN+CNV+NKMISVERILQF+ I SEAPL I C P +W +G ID+DNLHV+Y+
Sbjct: 1167 QAWVIWNLCNVENKMISVERILQFTKIPSEAPLVIENCRPSLEWPSNGRIDLDNLHVRYT 1226
Query: 863 PSLRMILKGITCTFPXXXXXXXXXXXXXXXXTLIQTLFRVVEPSNGKTLIDGVDIGKLGL 684
P+L M+LKGITCTFP TLIQ LFRVVEPS G+ LIDGVDI K+GL
Sbjct: 1227 PTLPMVLKGITCTFPGERKIGVVGRTGSGKSTLIQALFRVVEPSEGQILIDGVDISKMGL 1286
Query: 683 KDLRSRLSIVPQNPTLFEGTMRTNLDPLKQHSDTEIWEVLNKCNLREIVRQDERLLDAPV 504
KDLRSRLSI+PQ+PTLF+GTMRTNLDPL +HSD EIWEVLNKC L EI+ QD+ LL+A V
Sbjct: 1287 KDLRSRLSIIPQDPTLFQGTMRTNLDPLGEHSDQEIWEVLNKCRLAEIIGQDKGLLNARV 1346
Query: 503 ATDGENWSVGQRQLICLARVLLSEK 429
A DGENWSVGQRQL+CLARVLL +
Sbjct: 1347 AEDGENWSVGQRQLVCLARVLLQRR 1371
Score = 100 bits (248), Expect(2) = 4e-99
Identities = 56/82 (68%), Positives = 59/82 (71%)
Frame = -1
Query: 433 RKFLVLXXXXXXXXXXXDNQIQKAIREATRSCTVITVAHRIPTVIDNYLVLLLEEGKIVE 254
RK LVL DN IQK IRE T CTVITVAHRIPTVIDN LVL+L+EGK+VE
Sbjct: 1371 RKILVLDEATASVDTATDNLIQKTIREETSKCTVITVAHRIPTVIDNDLVLVLDEGKVVE 1430
Query: 253 YGSPYVLLKDHSSAFSKLVREF 188
Y SP LLKD SSAFSKLV EF
Sbjct: 1431 YDSPPQLLKDSSSAFSKLVMEF 1452
>emb|CBI27547.3| unnamed protein product [Vitis vinifera]
Length = 1363
Score = 289 bits (739), Expect(2) = 4e-99
Identities = 141/205 (68%), Positives = 162/205 (79%)
Frame = -3
Query: 1043 QGWVIWNICNVDNKMISVERILQFSSIQSEAPLTIVGCTPDPDWLMSGTIDIDNLHVQYS 864
Q WVIWN+CNV+NKMISVERILQF+ I SEAPL I C P +W +G ID+DNLHV+Y+
Sbjct: 1068 QAWVIWNLCNVENKMISVERILQFTKIPSEAPLVIENCRPSLEWPSNGRIDLDNLHVRYT 1127
Query: 863 PSLRMILKGITCTFPXXXXXXXXXXXXXXXXTLIQTLFRVVEPSNGKTLIDGVDIGKLGL 684
P+L M+LKGITCTFP TLIQ LFRVVEPS G+ LIDGVDI K+GL
Sbjct: 1128 PTLPMVLKGITCTFPGERKIGVVGRTGSGKSTLIQALFRVVEPSEGQILIDGVDISKMGL 1187
Query: 683 KDLRSRLSIVPQNPTLFEGTMRTNLDPLKQHSDTEIWEVLNKCNLREIVRQDERLLDAPV 504
KDLRSRLSI+PQ+PTLF+GTMRTNLDPL +HSD EIWEVLNKC L EI+ QD+ LL+A V
Sbjct: 1188 KDLRSRLSIIPQDPTLFQGTMRTNLDPLGEHSDQEIWEVLNKCRLAEIIGQDKGLLNARV 1247
Query: 503 ATDGENWSVGQRQLICLARVLLSEK 429
A DGENWSVGQRQL+CLARVLL +
Sbjct: 1248 AEDGENWSVGQRQLVCLARVLLQRR 1272
Score = 100 bits (248), Expect(2) = 4e-99
Identities = 56/82 (68%), Positives = 59/82 (71%)
Frame = -1
Query: 433 RKFLVLXXXXXXXXXXXDNQIQKAIREATRSCTVITVAHRIPTVIDNYLVLLLEEGKIVE 254
RK LVL DN IQK IRE T CTVITVAHRIPTVIDN LVL+L+EGK+VE
Sbjct: 1272 RKILVLDEATASVDTATDNLIQKTIREETSKCTVITVAHRIPTVIDNDLVLVLDEGKVVE 1331
Query: 253 YGSPYVLLKDHSSAFSKLVREF 188
Y SP LLKD SSAFSKLV EF
Sbjct: 1332 YDSPPQLLKDSSSAFSKLVMEF 1353
>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
resistance protein ABC transporter family [Populus
trichocarpa]
Length = 1044
Score = 290 bits (743), Expect(2) = 4e-98
Identities = 138/205 (67%), Positives = 165/205 (80%)
Frame = -3
Query: 1043 QGWVIWNICNVDNKMISVERILQFSSIQSEAPLTIVGCTPDPDWLMSGTIDIDNLHVQYS 864
Q WVIWN+CNV+NKMISVERILQF++I SEAPL I C P P+W + G I++ +LHVQY
Sbjct: 752 QSWVIWNLCNVENKMISVERILQFTNIPSEAPLVIEDCGPKPEWPVDGRIELISLHVQYG 811
Query: 863 PSLRMILKGITCTFPXXXXXXXXXXXXXXXXTLIQTLFRVVEPSNGKTLIDGVDIGKLGL 684
PSL M+LKGITCTFP TLIQ LFRV+EPS G+ LIDG+DI K+GL
Sbjct: 812 PSLPMVLKGITCTFPGGKKIGVVGRTGSGKSTLIQALFRVIEPSGGQILIDGLDISKIGL 871
Query: 683 KDLRSRLSIVPQNPTLFEGTMRTNLDPLKQHSDTEIWEVLNKCNLREIVRQDERLLDAPV 504
+DLRSRL I+PQ+PTLF+GT+RTNLDPL+QHSD EIWEVLNKC L + V+QD+RLLDAPV
Sbjct: 872 QDLRSRLGIIPQDPTLFQGTVRTNLDPLEQHSDQEIWEVLNKCRLADTVKQDKRLLDAPV 931
Query: 503 ATDGENWSVGQRQLICLARVLLSEK 429
A DGENWSVGQRQL+CLARV+L ++
Sbjct: 932 AEDGENWSVGQRQLVCLARVMLKKR 956
Score = 95.1 bits (235), Expect(2) = 4e-98
Identities = 51/84 (60%), Positives = 62/84 (73%)
Frame = -1
Query: 433 RKFLVLXXXXXXXXXXXDNQIQKAIREATRSCTVITVAHRIPTVIDNYLVLLLEEGKIVE 254
R+ LVL DN IQ IRE T +CTVITVAHRIPTVIDN LVL+L++GK+VE
Sbjct: 956 RRILVLDEATASIDTATDNIIQGTIREETSTCTVITVAHRIPTVIDNDLVLVLDDGKVVE 1015
Query: 253 YGSPYVLLKDHSSAFSKLVREFVK 182
Y SP LL+D+SS+FSKLV EF++
Sbjct: 1016 YDSPVKLLEDNSSSFSKLVTEFLR 1039
>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
resistance protein ABC transporter family [Populus
trichocarpa]
Length = 1361
Score = 283 bits (723), Expect(2) = 5e-96
Identities = 134/205 (65%), Positives = 163/205 (79%)
Frame = -3
Query: 1043 QGWVIWNICNVDNKMISVERILQFSSIQSEAPLTIVGCTPDPDWLMSGTIDIDNLHVQYS 864
Q WVIWN+CNV+NKMISVERILQF++I SEAPL I C P P+W + G +++ L VQYS
Sbjct: 1072 QAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIEDCRPKPEWPVDGRVELIGLDVQYS 1131
Query: 863 PSLRMILKGITCTFPXXXXXXXXXXXXXXXXTLIQTLFRVVEPSNGKTLIDGVDIGKLGL 684
PSL +LKGITCTFP TLIQ LFRV+EPS G+ LIDG+DI K+GL
Sbjct: 1132 PSLPKVLKGITCTFPGGKKIGVVGRTGSGKSTLIQALFRVIEPSGGQILIDGLDISKIGL 1191
Query: 683 KDLRSRLSIVPQNPTLFEGTMRTNLDPLKQHSDTEIWEVLNKCNLREIVRQDERLLDAPV 504
+DLRS+L I+PQ+PTLF GT+RTNLDPL++HSD EIWEVLNKC L +IV++D+RLLDAPV
Sbjct: 1192 RDLRSKLGIIPQDPTLFRGTVRTNLDPLEKHSDQEIWEVLNKCRLADIVKRDKRLLDAPV 1251
Query: 503 ATDGENWSVGQRQLICLARVLLSEK 429
+ DGENWSVGQRQL+CLARVLL ++
Sbjct: 1252 SEDGENWSVGQRQLVCLARVLLKKR 1276
Score = 95.9 bits (237), Expect(2) = 5e-96
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = -1
Query: 433 RKFLVLXXXXXXXXXXXDNQIQKAIREATRSCTVITVAHRIPTVIDNYLVLLLEEGKIVE 254
R+ LVL DN IQ IRE T CTVITVAHRIPTVIDN L+L+LE+GK+VE
Sbjct: 1276 RRILVLDEATASIDIETDNIIQGTIREETSRCTVITVAHRIPTVIDNDLILVLEDGKVVE 1335
Query: 253 YGSPYVLLKDHSSAFSKLVREFVK 182
Y SP LLKD+SS+FSKLV EF++
Sbjct: 1336 YDSPVKLLKDNSSSFSKLVIEFLR 1359
>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
abc-transoprter, putative [Ricinus communis]
gi|223546054|gb|EEF47557.1| multidrug
resistance-associated protein 2, 6 (mrp2, 6),
abc-transoprter, putative [Ricinus communis]
Length = 1464
Score = 276 bits (705), Expect(2) = 1e-93
Identities = 135/205 (65%), Positives = 159/205 (77%)
Frame = -3
Query: 1043 QGWVIWNICNVDNKMISVERILQFSSIQSEAPLTIVGCTPDPDWLMSGTIDIDNLHVQYS 864
Q WVIWN+CNV+NKMISVERILQF++I SEAPL I P+P W + G I++ NL VQYS
Sbjct: 1168 QAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIEDSRPNPKWPVDGRIELVNLCVQYS 1227
Query: 863 PSLRMILKGITCTFPXXXXXXXXXXXXXXXXTLIQTLFRVVEPSNGKTLIDGVDIGKLGL 684
PSL M+LK ITC FP TLIQ LFRV+EPS G+ LIDG DI K+GL
Sbjct: 1228 PSLPMVLKSITCIFPGGKKIGVVGRTGSGKSTLIQALFRVIEPSEGQILIDGQDISKIGL 1287
Query: 683 KDLRSRLSIVPQNPTLFEGTMRTNLDPLKQHSDTEIWEVLNKCNLREIVRQDERLLDAPV 504
+DLRS L I+PQ+PTLF+GT+RTNLDPL++HSD EIWEVL KC L +IVRQD RLL+APV
Sbjct: 1288 RDLRSGLGIIPQDPTLFQGTVRTNLDPLQEHSDHEIWEVLKKCRLADIVRQDSRLLEAPV 1347
Query: 503 ATDGENWSVGQRQLICLARVLLSEK 429
A DGENWSVGQRQL+CLARVLL ++
Sbjct: 1348 AEDGENWSVGQRQLVCLARVLLKKR 1372
Score = 94.7 bits (234), Expect(2) = 1e-93
Identities = 52/84 (61%), Positives = 60/84 (71%)
Frame = -1
Query: 433 RKFLVLXXXXXXXXXXXDNQIQKAIREATRSCTVITVAHRIPTVIDNYLVLLLEEGKIVE 254
R+ LVL DN IQ AIRE T CTVITVAHRIPTVIDN LVL+L+EGK++E
Sbjct: 1372 RRILVLDEATASIDTATDNIIQGAIREETSRCTVITVAHRIPTVIDNDLVLVLDEGKVIE 1431
Query: 253 YGSPYVLLKDHSSAFSKLVREFVK 182
Y P LLKD SS+FSKLV EF++
Sbjct: 1432 YDCPGQLLKDSSSSFSKLVAEFLR 1455