BLASTX nr result

ID: Coptis24_contig00001114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001114
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530842.1| dihydropyrimidinase, putative [Ricinus commu...   491   e-137
ref|XP_004140190.1| PREDICTED: dihydropyrimidinase-like [Cucumis...   489   e-136
ref|XP_002273526.2| PREDICTED: dihydropyrimidinase-like [Vitis v...   487   e-135
ref|XP_002873555.1| dihydropyrimidinase [Arabidopsis lyrata subs...   484   e-134
ref|XP_003617228.1| Dihydropyrimidinase [Medicago truncatula] gi...   483   e-134

>ref|XP_002530842.1| dihydropyrimidinase, putative [Ricinus communis]
           gi|223529606|gb|EEF31555.1| dihydropyrimidinase,
           putative [Ricinus communis]
          Length = 503

 Score =  491 bits (1264), Expect = e-137
 Identities = 244/286 (85%), Positives = 259/286 (90%)
 Frame = +2

Query: 2   THLGMEFMGTETIDDFFXXXXXXXXXXXXMHIDFVIPVNGSLSAGFEAYTKKAERSCMDY 181
           THL M+FMGT+TIDDFF            MHIDFVIPVNGSL AG+EAY KKA++SCMDY
Sbjct: 114 THLAMDFMGTQTIDDFFSGQAAALAGGTTMHIDFVIPVNGSLMAGYEAYEKKAKKSCMDY 173

Query: 182 GFHMAITKWDEVVARDMEIMVKEKGINSFKFFLAYKGSLMISDELLLQGFKICKSLGALA 361
           GFHMAITKWDEV++R+MEIMVKEKGINSFKFFLAYKGSLMI+DELLL+GFK CKSLGALA
Sbjct: 174 GFHMAITKWDEVISREMEIMVKEKGINSFKFFLAYKGSLMINDELLLEGFKRCKSLGALA 233

Query: 362 MVHAENGDAVAEGQKRMIDLGITGPEGHALSRPPVLEGEATSRAIRLAGFVNTPLYVVHV 541
           MVHAENGDAV EGQKRMI+LGITGPEGHALSRPPVLEGEAT+RAIRLA FVNTPLYVVHV
Sbjct: 234 MVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVLEGEATARAIRLASFVNTPLYVVHV 293

Query: 542 MSIDAMEEIAKARKSGQRVVGEPVVSGLVLDDSWLWDNDFITAAKYVMSPPIRKLGHGKA 721
           MSIDAMEEIA+ARKSGQRV+GEPVVSGLVLDDS LWD DF TA+KYVMSPPIR  GH KA
Sbjct: 294 MSIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTTASKYVMSPPIRSSGHDKA 353

Query: 722 LQAALSTGTLQLVGTDHCTFNSTQKALGIDDFRKIPNGVNGIEERM 859
           LQAALSTG LQLVGTDHC FNSTQKA GIDDFRKIPNGVNGIEERM
Sbjct: 354 LQAALSTGILQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNGIEERM 399


>ref|XP_004140190.1| PREDICTED: dihydropyrimidinase-like [Cucumis sativus]
           gi|449480993|ref|XP_004156050.1| PREDICTED:
           dihydropyrimidinase-like [Cucumis sativus]
          Length = 528

 Score =  489 bits (1259), Expect = e-136
 Identities = 243/286 (84%), Positives = 259/286 (90%)
 Frame = +2

Query: 2   THLGMEFMGTETIDDFFXXXXXXXXXXXXMHIDFVIPVNGSLSAGFEAYTKKAERSCMDY 181
           THL  EFMGTET+DDFF            MHIDFVIPVNGSLSAGFE+Y KKA++SCMDY
Sbjct: 102 THLAFEFMGTETVDDFFTGQAAALAGGTTMHIDFVIPVNGSLSAGFESYVKKAKKSCMDY 161

Query: 182 GFHMAITKWDEVVARDMEIMVKEKGINSFKFFLAYKGSLMISDELLLQGFKICKSLGALA 361
           GFHMAITKWDEVVA++MEIMVKEKGINSFKFFLAYKG+LMISDELLLQG K CKSLGALA
Sbjct: 162 GFHMAITKWDEVVAQEMEIMVKEKGINSFKFFLAYKGALMISDELLLQGLKKCKSLGALA 221

Query: 362 MVHAENGDAVAEGQKRMIDLGITGPEGHALSRPPVLEGEATSRAIRLAGFVNTPLYVVHV 541
           MVHAENGDAV EGQ+RMI+LGITGPEGHALSRP VLEGEATSRAIRLA FVNTPLYVVHV
Sbjct: 222 MVHAENGDAVFEGQERMIELGITGPEGHALSRPAVLEGEATSRAIRLASFVNTPLYVVHV 281

Query: 542 MSIDAMEEIAKARKSGQRVVGEPVVSGLVLDDSWLWDNDFITAAKYVMSPPIRKLGHGKA 721
           MSIDAMEEIAKARK+GQ+V+GEPVVSGLVLD+S LWD DF+TAAKYVMSPPIR  GH KA
Sbjct: 282 MSIDAMEEIAKARKAGQKVIGEPVVSGLVLDESGLWDPDFVTAAKYVMSPPIRSSGHDKA 341

Query: 722 LQAALSTGTLQLVGTDHCTFNSTQKALGIDDFRKIPNGVNGIEERM 859
           LQAALSTG LQLVGTDHC FNSTQK++GIDDFRKIPNGVNGIEERM
Sbjct: 342 LQAALSTGVLQLVGTDHCVFNSTQKSIGIDDFRKIPNGVNGIEERM 387


>ref|XP_002273526.2| PREDICTED: dihydropyrimidinase-like [Vitis vinifera]
           gi|296083879|emb|CBI24267.3| unnamed protein product
           [Vitis vinifera]
          Length = 536

 Score =  487 bits (1253), Expect = e-135
 Identities = 245/286 (85%), Positives = 255/286 (89%)
 Frame = +2

Query: 2   THLGMEFMGTETIDDFFXXXXXXXXXXXXMHIDFVIPVNGSLSAGFEAYTKKAERSCMDY 181
           THL MEFMGTETIDDFF            MHIDFVIPV GSLS G EAY  KA++SCMDY
Sbjct: 110 THLAMEFMGTETIDDFFSGQAAALAGGTTMHIDFVIPVKGSLSKGLEAYKDKAKKSCMDY 169

Query: 182 GFHMAITKWDEVVARDMEIMVKEKGINSFKFFLAYKGSLMISDELLLQGFKICKSLGALA 361
           GFHMAITKWDE V+R+MEIMVKEKGINSFKFFLAYKG+LMI+DELLL+G K CKSLGALA
Sbjct: 170 GFHMAITKWDENVSREMEIMVKEKGINSFKFFLAYKGALMINDELLLEGLKKCKSLGALA 229

Query: 362 MVHAENGDAVAEGQKRMIDLGITGPEGHALSRPPVLEGEATSRAIRLAGFVNTPLYVVHV 541
           MVHAENGDAV EGQKRMI+LGITGPEGHALSRPPVLEGEAT+RAIRLA FVNTPLYVVHV
Sbjct: 230 MVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVLEGEATARAIRLASFVNTPLYVVHV 289

Query: 542 MSIDAMEEIAKARKSGQRVVGEPVVSGLVLDDSWLWDNDFITAAKYVMSPPIRKLGHGKA 721
           MSIDAMEEIAKARKSGQRV+GEPVVSGLVLDDS LWD DFI AAKYVMSPPIR LGH KA
Sbjct: 290 MSIDAMEEIAKARKSGQRVIGEPVVSGLVLDDSGLWDPDFINAAKYVMSPPIRALGHDKA 349

Query: 722 LQAALSTGTLQLVGTDHCTFNSTQKALGIDDFRKIPNGVNGIEERM 859
           LQAALSTG LQLVGTDHC FNSTQKA GIDDFRKIPNGVNGIEERM
Sbjct: 350 LQAALSTGNLQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERM 395


>ref|XP_002873555.1| dihydropyrimidinase [Arabidopsis lyrata subsp. lyrata]
           gi|297319392|gb|EFH49814.1| dihydropyrimidinase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 531

 Score =  484 bits (1246), Expect = e-134
 Identities = 236/286 (82%), Positives = 256/286 (89%)
 Frame = +2

Query: 2   THLGMEFMGTETIDDFFXXXXXXXXXXXXMHIDFVIPVNGSLSAGFEAYTKKAERSCMDY 181
           THL MEFMGTETIDDFF            MHIDFVIP+NG+L AGFEAY  K+  SCMDY
Sbjct: 104 THLAMEFMGTETIDDFFSGQAAALAGGTTMHIDFVIPINGNLVAGFEAYENKSRESCMDY 163

Query: 182 GFHMAITKWDEVVARDMEIMVKEKGINSFKFFLAYKGSLMISDELLLQGFKICKSLGALA 361
           GFHMAITKWDE V+RDMEI+VKEKGINSFKFFLAYKGSLM++D+LLL+G K CKSLGALA
Sbjct: 164 GFHMAITKWDEGVSRDMEILVKEKGINSFKFFLAYKGSLMVTDDLLLEGLKRCKSLGALA 223

Query: 362 MVHAENGDAVAEGQKRMIDLGITGPEGHALSRPPVLEGEATSRAIRLAGFVNTPLYVVHV 541
           MVHAENGDAV EGQKRMI+LGITGPEGHALSRPPVLEGEAT+RAIRLA FVNTPLYVVHV
Sbjct: 224 MVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVLEGEATARAIRLARFVNTPLYVVHV 283

Query: 542 MSIDAMEEIAKARKSGQRVVGEPVVSGLVLDDSWLWDNDFITAAKYVMSPPIRKLGHGKA 721
           MS+DAM+EIAKARKSGQ+V+GEPVVSGL+LDD WLWD DF  A+KYVMSPPIR +GHGKA
Sbjct: 284 MSVDAMDEIAKARKSGQKVIGEPVVSGLILDDHWLWDPDFTIASKYVMSPPIRPVGHGKA 343

Query: 722 LQAALSTGTLQLVGTDHCTFNSTQKALGIDDFRKIPNGVNGIEERM 859
           LQ ALSTG LQLVGTDHCTFNSTQKALG+DDFRKIPNGVNG+EERM
Sbjct: 344 LQDALSTGILQLVGTDHCTFNSTQKALGLDDFRKIPNGVNGLEERM 389


>ref|XP_003617228.1| Dihydropyrimidinase [Medicago truncatula]
           gi|355518563|gb|AET00187.1| Dihydropyrimidinase
           [Medicago truncatula]
          Length = 542

 Score =  483 bits (1243), Expect = e-134
 Identities = 239/286 (83%), Positives = 254/286 (88%)
 Frame = +2

Query: 2   THLGMEFMGTETIDDFFXXXXXXXXXXXXMHIDFVIPVNGSLSAGFEAYTKKAERSCMDY 181
           THL MEFM T  +DDFF            MHIDFVIP NGSL+AGFEAY KKA++SCMDY
Sbjct: 116 THLEMEFMNTVAVDDFFSGQAAALAGGTTMHIDFVIPTNGSLTAGFEAYEKKAKKSCMDY 175

Query: 182 GFHMAITKWDEVVARDMEIMVKEKGINSFKFFLAYKGSLMISDELLLQGFKICKSLGALA 361
           GFHMAITKWDE V+R+ME+MVKEKGINSFKFF+AYKGSLMISDELLL+GFK CKSLGALA
Sbjct: 176 GFHMAITKWDETVSREMELMVKEKGINSFKFFMAYKGSLMISDELLLEGFKKCKSLGALA 235

Query: 362 MVHAENGDAVAEGQKRMIDLGITGPEGHALSRPPVLEGEATSRAIRLAGFVNTPLYVVHV 541
           MVHAENGDAV EGQK+MI+LGITGPEGHALSRP VLEGEAT+RAIRLA FVNTPLYVVHV
Sbjct: 236 MVHAENGDAVYEGQKKMIELGITGPEGHALSRPAVLEGEATARAIRLADFVNTPLYVVHV 295

Query: 542 MSIDAMEEIAKARKSGQRVVGEPVVSGLVLDDSWLWDNDFITAAKYVMSPPIRKLGHGKA 721
           MSIDAMEE+AKARKSGQRV+GEPV+SGL LDDSWLW  DF TAAKYVMSPPIRK GH KA
Sbjct: 296 MSIDAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKA 355

Query: 722 LQAALSTGTLQLVGTDHCTFNSTQKALGIDDFRKIPNGVNGIEERM 859
           LQAALSTG LQLVGTDHC FNSTQKA GIDDFRKIPNGVNGIEERM
Sbjct: 356 LQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNGIEERM 401


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