BLASTX nr result

ID: Coptis24_contig00001109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001109
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002338425.1| predicted protein [Populus trichocarpa] gi|2...   183   3e-54
gb|ABK95950.1| unknown [Populus trichocarpa]                          183   3e-54
emb|CAN59960.1| hypothetical protein VITISV_011608 [Vitis vinifera]   167   3e-52
gb|ABK94796.1| unknown [Populus trichocarpa]                          182   6e-52
ref|XP_002533939.1| Metalloendoproteinase 1 precursor, putative ...   180   6e-52

>ref|XP_002338425.1| predicted protein [Populus trichocarpa] gi|222872207|gb|EEF09338.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  183 bits (465), Expect(2) = 3e-54
 Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 1/167 (0%)
 Frame = -3

Query: 717 FCLLSGKPTKWPPDKRSLTYTFLS-GVEVIDVQTLRPLISRAFARWAAVTQFTFAEAQAG 541
           +   +G P KW P K  LTYTF S GV+V+D+ TLR + S AF +W+ V+  TF EA  G
Sbjct: 138 YTFFNGMP-KWRPSKYHLTYTFGSDGVQVVDMDTLRSVCSDAFKKWSDVSPLTFQEASDG 196

Query: 540 AKSDISIGFYRGAHGDTESFDGPGGVLAHAYAPTIGVFHYDADENWSTNPTTTEIDLESI 361
           A ++I I FYRG HGD   FDGPG +LAHA++P  G FHYDADE WSTNP   +IDLES+
Sbjct: 197 ASANIVIAFYRGDHGDGYPFDGPGKILAHAFSPENGRFHYDADEKWSTNPAMDQIDLESV 256

Query: 360 AVHEIGHLLGLGHSTIPSAIMFAALVPGQTKRGPLQPDDVQGIRTLY 220
           AVHEIGHLLGL HS+  +A+M+ ++  G TK+  L  DD+ GI  LY
Sbjct: 257 AVHEIGHLLGLAHSSDSNAVMYPSIAAG-TKKRNLAQDDIDGIHALY 302



 Score = 55.5 bits (132), Expect(2) = 3e-54
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
 Frame = -1

Query: 872 FDDLLESAVKEYQLNHQLKPTGSLNSMTVKQMMKPRCGVPDTTRMSSGT-------VSHF 714
           FDDLLESA+K YQ    L  TG L+  T+KQMM PRCG+ D T  ++ +       V H+
Sbjct: 79  FDDLLESALKTYQNYFHLNVTGILDDSTIKQMMIPRCGMHDITPNNTKSNYTKFHMVMHY 138

Query: 713 AFYPG 699
            F+ G
Sbjct: 139 TFFNG 143


>gb|ABK95950.1| unknown [Populus trichocarpa]
          Length = 304

 Score =  183 bits (465), Expect(2) = 3e-54
 Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 1/167 (0%)
 Frame = -3

Query: 717 FCLLSGKPTKWPPDKRSLTYTFLS-GVEVIDVQTLRPLISRAFARWAAVTQFTFAEAQAG 541
           +   +G P KW P K  LTYTF S GV+V+D+ TLR + S AF +W+ V+  TF EA  G
Sbjct: 138 YTFFNGMP-KWRPSKYHLTYTFGSDGVQVVDMDTLRSVCSDAFKKWSDVSPLTFQEASDG 196

Query: 540 AKSDISIGFYRGAHGDTESFDGPGGVLAHAYAPTIGVFHYDADENWSTNPTTTEIDLESI 361
           A ++I I FYRG HGD   FDGPG +LAHA++P  G FHYDADE WSTNP   +IDLES+
Sbjct: 197 ASANIVIAFYRGDHGDGYPFDGPGKILAHAFSPENGRFHYDADEKWSTNPAMDQIDLESV 256

Query: 360 AVHEIGHLLGLGHSTIPSAIMFAALVPGQTKRGPLQPDDVQGIRTLY 220
           AVHEIGHLLGL HS+  +A+M+ ++  G TK+  L  DD+ GI  LY
Sbjct: 257 AVHEIGHLLGLAHSSDSNAVMYPSIAAG-TKKRNLAQDDIDGIHALY 302



 Score = 55.5 bits (132), Expect(2) = 3e-54
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
 Frame = -1

Query: 872 FDDLLESAVKEYQLNHQLKPTGSLNSMTVKQMMKPRCGVPDTTRMSSGT-------VSHF 714
           FDDLLESA+K YQ    L  TG L+  T+KQMM PRCG+ D T  ++ +       V H+
Sbjct: 79  FDDLLESALKTYQNYFHLNVTGILDDSTIKQMMIPRCGMHDITPNNTKSNYTKFHMVMHY 138

Query: 713 AFYPG 699
            F+ G
Sbjct: 139 TFFNG 143


>emb|CAN59960.1| hypothetical protein VITISV_011608 [Vitis vinifera]
          Length = 319

 Score =  167 bits (424), Expect(2) = 3e-52
 Identities = 81/167 (48%), Positives = 106/167 (63%)
 Frame = -3

Query: 717 FCLLSGKPTKWPPDKRSLTYTFLSGVEVIDVQTLRPLISRAFARWAAVTQFTFAEAQAGA 538
           +  L+G P +WPP K  LTY FLSG       T    ++RAF +WA+ T F+FAE Q   
Sbjct: 147 YSFLAGSP-RWPPSKTHLTYAFLSGTP----STTMSAVTRAFGQWASATNFSFAETQDYT 201

Query: 537 KSDISIGFYRGAHGDTESFDGPGGVLAHAYAPTIGVFHYDADENWSTNPTTTEIDLESIA 358
            +D+ IGF RG HGD   FDGPGG +AH++ PT G  H+D DE+W         D+E++A
Sbjct: 202 NADMKIGFQRGDHGDGHPFDGPGGTIAHSFPPTDGRLHFDGDESWVVGAVAGAFDVETVA 261

Query: 357 VHEIGHLLGLGHSTIPSAIMFAALVPGQTKRGPLQPDDVQGIRTLYD 217
           +HEIGHLLGLGHS++  AIMF  +  G TK   L  DD+QGI+ LY+
Sbjct: 262 LHEIGHLLGLGHSSVEGAIMFPTIAYGVTK--GLNEDDIQGIQALYN 306



 Score = 64.3 bits (155), Expect(2) = 3e-52
 Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 16/75 (21%)
 Frame = -1

Query: 872 FDDLLESAVKEYQLNHQLKPTGSLNSMTVKQMMKPRCGVPD----TTRMSSG-------- 729
           FDDLLE A+K YQ N+ LK +G+L+S TV  M+KPRCGV D    T+RM SG        
Sbjct: 79  FDDLLEFAIKTYQTNYYLKASGNLDSETVSVMVKPRCGVADIINGTSRMRSGSRSYPHGY 138

Query: 728 ----TVSHFAFYPGN 696
               TV+H++F  G+
Sbjct: 139 GSFHTVAHYSFLAGS 153


>gb|ABK94796.1| unknown [Populus trichocarpa]
          Length = 309

 Score =  182 bits (461), Expect(2) = 6e-52
 Identities = 92/158 (58%), Positives = 108/158 (68%), Gaps = 1/158 (0%)
 Frame = -3

Query: 690 KWPPDKRSLTYTFLSGVEVIDVQTLRPLISRAFARWAAVTQFTFAEAQAGAKSDISIGFY 511
           KWPP K +LTY F SGV+V+   TLR + S+AF  WA V++FTF EA AGA +DI I FY
Sbjct: 151 KWPPSKYALTYRFGSGVQVVGSDTLRSVCSKAFQTWAKVSKFTFQEATAGASADIVIEFY 210

Query: 510 RGAHGDTESFDGPGGVLAHAYAPTIGVFHYDADENWSTNPTTTEIDLESIAVHEIGHLLG 331
            G HGD   FDGPG  LAHA+ P  G  HYDADENWST+P   + DLES+ VHEIGHLLG
Sbjct: 211 SGDHGDRYPFDGPGKTLAHAFYPQDGRLHYDADENWSTDPAMDQTDLESVTVHEIGHLLG 270

Query: 330 LGHST-IPSAIMFAALVPGQTKRGPLQPDDVQGIRTLY 220
           L HST  P AIM+  +  G+ KR  L  DD+ GI  LY
Sbjct: 271 LHHSTDHPEAIMYPTIEAGKKKR-DLAQDDIDGIHALY 307



 Score = 49.3 bits (116), Expect(2) = 6e-52
 Identities = 23/41 (56%), Positives = 29/41 (70%)
 Frame = -1

Query: 872 FDDLLESAVKEYQLNHQLKPTGSLNSMTVKQMMKPRCGVPD 750
           FDD LE A+K YQ    L  TG+L+S T++QM+ PRCG PD
Sbjct: 80  FDDHLELALKTYQEYFHLNVTGNLDSSTIQQMVIPRCGTPD 120


>ref|XP_002533939.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
           gi|223526094|gb|EEF28446.1| Metalloendoproteinase 1
           precursor, putative [Ricinus communis]
          Length = 226

 Score =  180 bits (456), Expect(2) = 6e-52
 Identities = 89/163 (54%), Positives = 111/163 (68%)
 Frame = -3

Query: 702 GKPTKWPPDKRSLTYTFLSGVEVIDVQTLRPLISRAFARWAAVTQFTFAEAQAGAKSDIS 523
           G+P +WP ++  L Y F S  +V   Q +  + +RAF +WA VT FTF E  + A+++I 
Sbjct: 65  GEP-RWPAERTHLRYRFRSSTQVPGTQNIGSICARAFQKWAEVTHFTFEEVASNAQAEIE 123

Query: 522 IGFYRGAHGDTESFDGPGGVLAHAYAPTIGVFHYDADENWSTNPTTTEIDLESIAVHEIG 343
           IGF+R +HGD   FDG  G LAHA APT G+FH+D DENWS NP   E+DLES+AVHEIG
Sbjct: 124 IGFHRRSHGDGHPFDGRSGTLAHATAPTGGMFHFDGDENWSENPEANEVDLESVAVHEIG 183

Query: 342 HLLGLGHSTIPSAIMFAALVPGQTKRGPLQPDDVQGIRTLYDL 214
           HLLGL HS  P+A+M+A    G TKR  L  DDVQGIR LY L
Sbjct: 184 HLLGLHHSDDPNAVMYATFRYGITKR-DLDSDDVQGIRALYGL 225



 Score = 51.2 bits (121), Expect(2) = 6e-52
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 13/64 (20%)
 Frame = -1

Query: 851 AVKEYQLNHQLKPTGSLNSMTVKQMMKPRCGVPDTTR-------------MSSGTVSHFA 711
           A++ YQ N+ LK TG L++ TV QMMKPRCG+PD                MS  ++ H+ 
Sbjct: 2   AIRNYQHNYHLKDTGILDNYTVSQMMKPRCGMPDVVTNNGTKHQSHNRKLMSIHSLVHYK 61

Query: 710 FYPG 699
           F+ G
Sbjct: 62  FFHG 65


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