BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001066
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46...   197   6e-49
emb|CBI20856.3| unnamed protein product [Vitis vinifera]              197   6e-49
ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|2...   194   8e-48
ref|XP_002308603.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46...   179   2e-43

>ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis
           vinifera]
          Length = 245

 Score =  197 bits (502), Expect = 6e-49
 Identities = 100/148 (67%), Positives = 113/148 (76%)
 Frame = +2

Query: 5   VNPNTTTSIILQVVNDDGXXXXXXXXXXXXXXXXXGIPLKHLAVAISCGLEESGSVLLDP 184
           +NPNTTTSII+QVV+DDG                  IPLKHLAVAI C L ESG V+LDP
Sbjct: 98  INPNTTTSIIIQVVSDDGALLPCAINAACAALVDAAIPLKHLAVAICCCLTESGYVILDP 157

Query: 185 TKLEEQKMKAFAYLVFPNSVASILPEASLQVEGELLEHGMITSVTHGVMLVDSYLHCLER 364
           TK+EEQKMKAFAYLVFPNS  SI+PE S  +EGEL+EHG+ITSVTHGVM VD YLHCLER
Sbjct: 158 TKVEEQKMKAFAYLVFPNSAISIIPEGSSHMEGELMEHGIITSVTHGVMSVDDYLHCLER 217

Query: 365 GRSASAKMSDFLRRSLQSRVPNDLPKTG 448
           G++AS KMS FLRRSLQS+ PND  + G
Sbjct: 218 GQAASTKMSAFLRRSLQSQAPNDSSRAG 245


>emb|CBI20856.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  197 bits (502), Expect = 6e-49
 Identities = 100/148 (67%), Positives = 113/148 (76%)
 Frame = +2

Query: 5   VNPNTTTSIILQVVNDDGXXXXXXXXXXXXXXXXXGIPLKHLAVAISCGLEESGSVLLDP 184
           +NPNTTTSII+QVV+DDG                  IPLKHLAVAI C L ESG V+LDP
Sbjct: 96  INPNTTTSIIIQVVSDDGALLPCAINAACAALVDAAIPLKHLAVAICCCLTESGYVILDP 155

Query: 185 TKLEEQKMKAFAYLVFPNSVASILPEASLQVEGELLEHGMITSVTHGVMLVDSYLHCLER 364
           TK+EEQKMKAFAYLVFPNS  SI+PE S  +EGEL+EHG+ITSVTHGVM VD YLHCLER
Sbjct: 156 TKVEEQKMKAFAYLVFPNSAISIIPEGSSHMEGELMEHGIITSVTHGVMSVDDYLHCLER 215

Query: 365 GRSASAKMSDFLRRSLQSRVPNDLPKTG 448
           G++AS KMS FLRRSLQS+ PND  + G
Sbjct: 216 GQAASTKMSAFLRRSLQSQAPNDSSRAG 243


>ref|XP_002324223.1| predicted protein [Populus trichocarpa] gi|222865657|gb|EEF02788.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  194 bits (492), Expect = 8e-48
 Identities = 98/147 (66%), Positives = 112/147 (76%)
 Frame = +2

Query: 2   TVNPNTTTSIILQVVNDDGXXXXXXXXXXXXXXXXXGIPLKHLAVAISCGLEESGSVLLD 181
           T+NPNTTTSII+QVVNDDG                 GIP+KHLAVAI C L E G V+LD
Sbjct: 95  TLNPNTTTSIIVQVVNDDGALLVCAINAACAALVDAGIPMKHLAVAICCCLAEGGYVILD 154

Query: 182 PTKLEEQKMKAFAYLVFPNSVASILPEASLQVEGELLEHGMITSVTHGVMLVDSYLHCLE 361
           PTKLEEQKM+ F YLVFPNSV S+LPE S  VEGE +EHG+ITSVTHGVM V+ YL CLE
Sbjct: 155 PTKLEEQKMRGFTYLVFPNSVVSVLPEGSSHVEGEPMEHGIITSVTHGVMSVEEYLKCLE 214

Query: 362 RGRSASAKMSDFLRRSLQSRVPNDLPK 442
           RGR+AS K+SDFLRRSLQS++P+D  K
Sbjct: 215 RGRAASTKLSDFLRRSLQSQLPSDSSK 241


>ref|XP_002308603.1| predicted protein [Populus trichocarpa] gi|222854579|gb|EEE92126.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  179 bits (455), Expect = 2e-43
 Identities = 94/147 (63%), Positives = 109/147 (74%)
 Frame = +2

Query: 2   TVNPNTTTSIILQVVNDDGXXXXXXXXXXXXXXXXXGIPLKHLAVAISCGLEESGSVLLD 181
           T+NPNTTTSII+Q VNDDG                  IP+KHLAVAI C L + G V+LD
Sbjct: 95  TLNPNTTTSIIVQFVNDDGALLVCAINAACAALVDARIPMKHLAVAICCCLADVGYVILD 154

Query: 182 PTKLEEQKMKAFAYLVFPNSVASILPEASLQVEGELLEHGMITSVTHGVMLVDSYLHCLE 361
           PTKLEEQKMK FAYLVFPNSV S+L E S  VEGE  EHG+ITSVTHGVM V+ YL C+E
Sbjct: 155 PTKLEEQKMKGFAYLVFPNSVLSVLLEGSSLVEGESTEHGIITSVTHGVMPVEEYLKCVE 214

Query: 362 RGRSASAKMSDFLRRSLQSRVPNDLPK 442
           RGR+ASAK+SDFLR+SLQS++ +D  K
Sbjct: 215 RGRAASAKLSDFLRKSLQSQLSSDSSK 241


>ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
           sativus]
          Length = 243

 Score =  179 bits (454), Expect = 2e-43
 Identities = 91/149 (61%), Positives = 108/149 (72%)
 Frame = +2

Query: 2   TVNPNTTTSIILQVVNDDGXXXXXXXXXXXXXXXXXGIPLKHLAVAISCGLEESGSVLLD 181
           T NPNTTTSII+QV++DDG                 GIPLKHLAVAISC L E+G V+LD
Sbjct: 95  TTNPNTTTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILD 154

Query: 182 PTKLEEQKMKAFAYLVFPNSVASILPEASLQVEGELLEHGMITSVTHGVMLVDSYLHCLE 361
           PTK+EE+KMKA  +LVFPN+  S++PE S Q  GE LEHG+ITSVT G M VD Y+HCLE
Sbjct: 155 PTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLE 214

Query: 362 RGRSASAKMSDFLRRSLQSRVPNDLPKTG 448
           RGR+A+ KMS FLRRSLQ ++P D  K G
Sbjct: 215 RGRAATTKMSAFLRRSLQPQLPMDSSKAG 243