BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001009
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|2...    85   3e-14
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    79   2e-12
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    75   3e-11
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    74   5e-11
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...    71   4e-10

>ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|222853875|gb|EEE91422.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 47/115 (40%), Positives = 67/115 (58%), Gaps = 9/115 (7%)
 Frame = -2

Query: 935 TTKFLVFKLD-KYGDAPNWVEVDNLGDQMIFLGRNSAISISAKGVPGFRGNCIYFTDDGF 759
           T +F+VFKLD +  D   WV ++N+G+Q+IFLGRN    + A   PGF GNC+Y++ D +
Sbjct: 243 TIQFIVFKLDDETSDPAKWVRLENIGNQIIFLGRNHTKCVPAIDFPGFEGNCVYYSCDLW 302

Query: 758 EFFR-RSNCRLTCLDNGVFYLEDGHIDSFFP-------LDSSHSFESQPVWISPN 618
             FR     +    D GV+ LE    + FFP        +S HSF+  P+WI+PN
Sbjct: 303 NHFRVLPMDQRDYADMGVYGLERRGKEEFFPENYGAFMPNSEHSFKYPPIWITPN 357


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
 Frame = -2

Query: 935 TTKFLVFKLDKYGDAPNWVEVDNLGDQMIFLGRNSAISISAKGVPGFRGNCIYFTDDGFE 756
           T +F VFKLD  G  P W  V +LGD M+F+G NS++++SA G+ G  G+CIY+TDD   
Sbjct: 287 TARFEVFKLDLNG--PRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDD--- 341

Query: 755 FFRRSNC--RLTCLDNGVFYLEDGHIDSF--FPLDSSHSFE-SQPVWISPN 618
            +  +N    +   D G+F L DG I+    +P +S    +   P+WISPN
Sbjct: 342 -YSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPN 391


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = -2

Query: 935 TTKFLVFKLDKYGDAPNWVEVDNLGDQMIFLGRNSAISISAKGVPGFRGNCIYFTDDGFE 756
           TT+F V +LD    AP W  V +LGD+ +FLG N ++S+S+   PG +GNCIY+TDD  E
Sbjct: 287 TTRFQVCRLDS--KAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE 344

Query: 755 FFRRSNCRLTCLDNGVFYLEDGHIDSFFPLDSSHSFESQ---PVWISPN 618
                +      D G+F LEDG I+   PL  SH F  +   P+W++PN
Sbjct: 345 --DNYDGIGGEQDLGIFNLEDGSIE---PLPCSH-FRIRWPPPLWVTPN 387


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = -2

Query: 935 TTKFLVFKLDKYGDAPNWVEVDNLGDQMIFLGRNSAISISAKGVPGFRGNCIYFTDDGFE 756
           TT+F V +LD    AP W  V +LGD+ +FLG N ++S+S+   PG +GNCIY+TDD  E
Sbjct: 287 TTRFQVCRLDL--KAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE 344

Query: 755 FFRRSNCRLTCLDNGVFYLEDGHIDSFFPLDSSHSFESQ---PVWISPN 618
                +      D G+F LEDG I+   PL  SH F  +   P+W++PN
Sbjct: 345 --DNYDGIGGEQDLGIFNLEDGSIE---PLPCSH-FRIRWPPPLWVTPN 387


>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 52/136 (38%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
 Frame = -2

Query: 935 TTKFLVFKLDKYGDAPNWVEVDNLGDQMIFLGRNSAISISAKGVPGFRGNCIYFTDDGFE 756
           T +F VFKL++ G +  W+EV NL D+++FLG +S  S SA  + G +GNCI+F +D F 
Sbjct: 288 TVRFKVFKLNEEGKS--WIEVKNLEDRVLFLGDDSTFSASASELSGCKGNCIFF-EDNFF 344

Query: 755 FFRR--SNCRLTCLDNGVFYLEDGHIDSF--FPLDSSHSFESQPVWISPNIVLGD*LSLS 588
           + R    +  +   D GVF LE G I     FP D S  F   P WI+           S
Sbjct: 345 YSREEGDDGSMIGRDIGVFELESGCIGPLRNFP-DYSKMFWPPPDWIA-----------S 392

Query: 587 NSFSTGSMHNMEELLI 540
            S    + + +EELLI
Sbjct: 393 TSLEVQNQNQLEELLI 408