BLASTX nr result

ID: Coptis24_contig00001000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00001000
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312043.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
ref|XP_002532264.1| Peptide transporter, putative [Ricinus commu...   155   4e-36
emb|CBI16245.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002281906.1| PREDICTED: nitrate excretion transporter 1 [...   150   1e-34
gb|ABD33073.1| TGF-beta receptor, type I/II extracellular region...   149   2e-34

>ref|XP_002312043.1| predicted protein [Populus trichocarpa] gi|222851863|gb|EEE89410.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/149 (53%), Positives = 103/149 (69%)
 Frame = +1

Query: 1   AIIADSFLGNFIVVSAXXXXXXXXXXXXXXXXXXXXXRPQLCNKGLLETCETPSQFQFAI 180
           A+IADSF  +F VVS                      RP  C  G L  CE PS+ Q+A+
Sbjct: 83  AVIADSFFSSFYVVSVFAFVSLLGLIMLTLASTIHSLRPPTCVIGSL-ACEAPSKLQYAV 141

Query: 181 LYSAITLVALGMGGTRFTIASMGADQFEKAKDQGTFFNWYFFTLYVASAIGIIAIVYVEN 360
           LY A+ L +LG+GGTRFTI++MGADQF+K  +QGTFF+WYFFTLY+ASAI + AI+YV++
Sbjct: 142 LYLALALASLGVGGTRFTISTMGADQFKKPNEQGTFFSWYFFTLYLASAISLTAIIYVQD 201

Query: 361 NVGWGLGFGLCLAINAAGLAVFILGKRYY 447
           +V WGLGFG+ +  NA GLAVF+LGKR+Y
Sbjct: 202 SVSWGLGFGIGVVANAIGLAVFLLGKRFY 230


>ref|XP_002532264.1| Peptide transporter, putative [Ricinus communis]
           gi|223528052|gb|EEF30130.1| Peptide transporter,
           putative [Ricinus communis]
          Length = 566

 Score =  155 bits (391), Expect = 4e-36
 Identities = 73/150 (48%), Positives = 98/150 (65%)
 Frame = +1

Query: 1   AIIADSFLGNFIVVSAXXXXXXXXXXXXXXXXXXXXXRPQLCNKGLLETCETPSQFQFAI 180
           AI+ADSFLGNF VV+                      +P+ C  G    C+TP + Q+A+
Sbjct: 82  AIVADSFLGNFTVVTISSCVSFLGVVLLVLTSLLDFLKPKPCEIGS-SLCQTPLKPQYAV 140

Query: 181 LYSAITLVALGMGGTRFTIASMGADQFEKAKDQGTFFNWYFFTLYVASAIGIIAIVYVEN 360
           LY A+ L ++G GG+R+++A+MGA+QF K +DQ T+FNW+FFTLY AS I + AIVYVE 
Sbjct: 141 LYGALVLTSIGFGGSRYSLATMGANQFNKPEDQNTYFNWFFFTLYSASVISVTAIVYVEE 200

Query: 361 NVGWGLGFGLCLAINAAGLAVFILGKRYYR 450
           N+ W LGFGLCL  N   L +F+LGKR+YR
Sbjct: 201 NISWALGFGLCLGANFIALVIFLLGKRFYR 230


>emb|CBI16245.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  150 bits (379), Expect = 1e-34
 Identities = 76/150 (50%), Positives = 93/150 (62%)
 Frame = +1

Query: 1   AIIADSFLGNFIVVSAXXXXXXXXXXXXXXXXXXXXXRPQLCNKGLLETCETPSQFQFAI 180
           AI AD F G+F ++ A                     RPQ C  G    C+ PS+ QFA+
Sbjct: 93  AIAADCFFGSFSII-ALCSCISLLGVVFLALTTLDFLRPQQCEHGST-LCKNPSKIQFAV 150

Query: 181 LYSAITLVALGMGGTRFTIASMGADQFEKAKDQGTFFNWYFFTLYVASAIGIIAIVYVEN 360
           LYS ITL  +G+GGTRFT+A+MGADQF+K K Q TFFNWYFF  YV+S I   AIVYVE+
Sbjct: 151 LYSGITLAVIGLGGTRFTLATMGADQFDKPKHQATFFNWYFFVFYVSSVISNTAIVYVED 210

Query: 361 NVGWGLGFGLCLAINAAGLAVFILGKRYYR 450
           NV W  GFGL +  N  GL +F+LG R+YR
Sbjct: 211 NVSWTWGFGLTVVCNLIGLVIFLLGSRFYR 240


>ref|XP_002281906.1| PREDICTED: nitrate excretion transporter 1 [Vitis vinifera]
          Length = 577

 Score =  150 bits (379), Expect = 1e-34
 Identities = 76/150 (50%), Positives = 93/150 (62%)
 Frame = +1

Query: 1   AIIADSFLGNFIVVSAXXXXXXXXXXXXXXXXXXXXXRPQLCNKGLLETCETPSQFQFAI 180
           AI AD F G+F ++ A                     RPQ C  G    C+ PS+ QFA+
Sbjct: 93  AIAADCFFGSFSII-ALCSCISLLGVVFLALTTLDFLRPQQCEHGST-LCKNPSKIQFAV 150

Query: 181 LYSAITLVALGMGGTRFTIASMGADQFEKAKDQGTFFNWYFFTLYVASAIGIIAIVYVEN 360
           LYS ITL  +G+GGTRFT+A+MGADQF+K K Q TFFNWYFF  YV+S I   AIVYVE+
Sbjct: 151 LYSGITLAVIGLGGTRFTLATMGADQFDKPKHQATFFNWYFFVFYVSSVISNTAIVYVED 210

Query: 361 NVGWGLGFGLCLAINAAGLAVFILGKRYYR 450
           NV W  GFGL +  N  GL +F+LG R+YR
Sbjct: 211 NVSWTWGFGLTVVCNLIGLVIFLLGSRFYR 240


>gb|ABD33073.1| TGF-beta receptor, type I/II extracellular region [Medicago
           truncatula]
          Length = 516

 Score =  149 bits (377), Expect = 2e-34
 Identities = 67/150 (44%), Positives = 94/150 (62%)
 Frame = +1

Query: 1   AIIADSFLGNFIVVSAXXXXXXXXXXXXXXXXXXXXXRPQLCNKGLLETCETPSQFQFAI 180
           AI+ADSF G+F V  A                     +P  C+K    TC+ P+  Q+ +
Sbjct: 50  AIVADSFFGSFYVAFASSCILLLGTILLFLTETINSLKPHPCSKDSSTTCKPPTGIQYTV 109

Query: 181 LYSAITLVALGMGGTRFTIASMGADQFEKAKDQGTFFNWYFFTLYVASAIGIIAIVYVEN 360
           LY +I L+++G GG+RFT AS+GA+QF+K + QGTFFNWYFFT YVAS   +  I+Y+E+
Sbjct: 110 LYISILLISIGFGGSRFTAASLGANQFDKPEHQGTFFNWYFFTFYVASGAALTGIIYIED 169

Query: 361 NVGWGLGFGLCLAINAAGLAVFILGKRYYR 450
           N+GW +GFG+C      G+ VF+LG R+YR
Sbjct: 170 NLGWAIGFGICAVAAFVGVVVFVLGYRFYR 199


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