BLASTX nr result

ID: Coptis24_contig00000994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000994
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263284.1| PREDICTED: uncharacterized protein At5g48480...   133   5e-29
gb|AFK34350.1| unknown [Lotus japonicus]                              131   2e-28
ref|XP_003552070.1| PREDICTED: uncharacterized protein At5g48480...   122   2e-25
ref|XP_002303084.1| predicted protein [Populus trichocarpa] gi|1...   121   3e-25
ref|NP_001235473.1| uncharacterized protein LOC100306467 [Glycin...   120   4e-25

>ref|XP_002263284.1| PREDICTED: uncharacterized protein At5g48480 [Vitis vinifera]
          Length = 161

 Score =  133 bits (335), Expect = 5e-29
 Identities = 76/146 (52%), Positives = 93/146 (63%), Gaps = 5/146 (3%)
 Frame = +3

Query: 246 FFGLKPQVFVEAPKASDAVQFYKTVFGAEELKRDIHPKRKADHELPLILSAELKLGSSVF 425
           F  +KPQ+FVEAPKA+DAVQFYK  FGAEE+ R +HPKRKAD ELPLILSAE+K+GS   
Sbjct: 18  FTAVKPQLFVEAPKATDAVQFYKAAFGAEEVNRTMHPKRKADQELPLILSAEVKIGSYSL 77

Query: 426 IVSDSSDESSTALVKS--GGYSFCLETNDVETXXXXXXXXXXXXXXXXXXXXXNTCCG-- 593
           +VSD +D+S  AL K+   G + CLET++VE                      + CCG  
Sbjct: 78  LVSDLADDSD-ALAKTVGTGCTICLETDEVEA-AVVKAVAAGATNECATADGESACCGGR 135

Query: 594 -KKVKDPYGVTWSICSGSKVVADVVA 668
             K+KDPYG  W ICS +K   DVVA
Sbjct: 136 VAKLKDPYGCVWLICSPAKKPVDVVA 161


>gb|AFK34350.1| unknown [Lotus japonicus]
          Length = 167

 Score =  131 bits (330), Expect = 2e-28
 Identities = 75/146 (51%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
 Frame = +3

Query: 246 FFGLKPQVFVEAPKASDAVQFYKTVFGAEELKRDIHPKRKADHELPLILSAELKLGSSVF 425
           F  +KPQ+ VEAPKA+DAV FYK  FGAEE+ R ++PKRKADHELPLILSAELK+  S  
Sbjct: 23  FVAVKPQLLVEAPKANDAVLFYKAAFGAEEVSRALNPKRKADHELPLILSAELKIAGSSI 82

Query: 426 IVSDSSDESSTALVKSGGYS--FCLETNDVETXXXXXXXXXXXXXXXXXXXXXNTCCG-- 593
           +VSD + + STA  K+GG     CLET DVE                        CCG  
Sbjct: 83  LVSDLAVD-STAPAKTGGNGIVLCLETEDVEAAVAKAVRAGAVKEGEVVEGEGGACCGGL 141

Query: 594 -KKVKDPYGVTWSICSGSKVVADVVA 668
             KVKDPYG  W ICS  K  A+V A
Sbjct: 142 VVKVKDPYGFIWQICSPVKASAEVAA 167


>ref|XP_003552070.1| PREDICTED: uncharacterized protein At5g48480-like [Glycine max]
          Length = 163

 Score =  122 bits (305), Expect = 2e-25
 Identities = 70/145 (48%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
 Frame = +3

Query: 246 FFGLKPQVFVEAPKASDAVQFYKTVFGAEELKRDIHPKRKADHELPLILSAELKLGSSVF 425
           F  LKPQ+ +EAPKA+DAV FYK  F AEE+ R ++PKRKA+HELPLILSAELK+  S  
Sbjct: 20  FVALKPQLLIEAPKANDAVLFYKAAFAAEEVGRTLNPKRKAEHELPLILSAELKIAGSTI 79

Query: 426 IVSDSSDES-STALVKSGGYSFCLETNDVETXXXXXXXXXXXXXXXXXXXXXNTCCG--- 593
           +V+D  D+S STA         CLET DVE                      + CCG   
Sbjct: 80  LVADLVDDSASTAKAGGNRVVLCLETEDVE-GAIEKAVSAGAVADGEVAEGEDACCGGRV 138

Query: 594 KKVKDPYGVTWSICSGSKVVADVVA 668
            KVKDPYG  W  C+  K  ADV A
Sbjct: 139 GKVKDPYGFVWLFCAPGKKCADVEA 163


>ref|XP_002303084.1| predicted protein [Populus trichocarpa] gi|118487570|gb|ABK95611.1|
           unknown [Populus trichocarpa]
           gi|222844810|gb|EEE82357.1| predicted protein [Populus
           trichocarpa]
          Length = 164

 Score =  121 bits (303), Expect = 3e-25
 Identities = 68/136 (50%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
 Frame = +3

Query: 246 FFGLKPQVFVEAPKASDAVQFYKTVFGAEELKRDIHPKRKADHELPLILSAELKLGSSVF 425
           F   KPQ+FVEAPKA+DAVQFYKT FGA E  R   PKRKAD ELP I+SA+L+L  S F
Sbjct: 20  FKSFKPQLFVEAPKANDAVQFYKTAFGAVETCRTTQPKRKADQELPHIVSAQLQLAGSTF 79

Query: 426 IVSDSSDESSTALVKSGG--YSFCLETNDVETXXXXXXXXXXXXXXXXXXXXXNTCCGKK 599
           +VSD SD+S  A  K+GG  ++ CLET DVE                        CC ++
Sbjct: 80  LVSDLSDDS--ASTKAGGTVFAMCLETEDVEAAVTKAVAAGAVAEGGVVDGEGACCCAER 137

Query: 600 ---VKDPYGVTWSICS 638
              VKDPYG  W  CS
Sbjct: 138 VTTVKDPYGFVWQFCS 153


>ref|NP_001235473.1| uncharacterized protein LOC100306467 [Glycine max]
           gi|255628635|gb|ACU14662.1| unknown [Glycine max]
          Length = 165

 Score =  120 bits (302), Expect = 4e-25
 Identities = 67/144 (46%), Positives = 83/144 (57%), Gaps = 3/144 (2%)
 Frame = +3

Query: 246 FFGLKPQVFVEAPKASDAVQFYKTVFGAEELKRDIHPKRKADHELPLILSAELKLGSSVF 425
           F  +KPQ+ VEAPKA+DA+ F+K  FGAEE+ R ++PKRKA+HELPLILSAELK+  S  
Sbjct: 22  FVAVKPQLLVEAPKANDAILFFKAAFGAEEVGRTLNPKRKAEHELPLILSAELKIAGSTI 81

Query: 426 IVSDSSDE-SSTALVKSGGYSFCLETNDVETXXXXXXXXXXXXXXXXXXXXXNTCCGK-- 596
           +V+D  D+ SS A     G   CLET DV+                        C G+  
Sbjct: 82  LVADLVDDTSSPAKTGGNGVVLCLETEDVDGAVAKAVSAGAVAEGEVAEGEVACCGGRVG 141

Query: 597 KVKDPYGVTWSICSGSKVVADVVA 668
           KVKDPYG  W  C+  K  ADV A
Sbjct: 142 KVKDPYGFVWLFCTPGKKCADVEA 165


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