BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000986
         (1243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513003.1| ubiquitin fusion degradaton protein, putativ...   497   e-138
ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|2...   493   e-137
gb|ABK95938.1| unknown [Populus trichocarpa]                          491   e-136
ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation prot...   487   e-135
ref|XP_003630940.1| Ubiquitin fusion degradation protein [Medica...   481   e-133

>ref|XP_002513003.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
            gi|223548014|gb|EEF49506.1| ubiquitin fusion degradaton
            protein, putative [Ricinus communis]
          Length = 356

 Score =  497 bits (1279), Expect = e-138
 Identities = 248/322 (77%), Positives = 263/322 (81%)
 Frame = -3

Query: 1151 MYFEGYGYHGSSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELH 972
            M+F+GYGYHG+SFEQTYRCYPASFI+KPQ+ESGDKIIMPPSALDRLASLHIDYPMLFEL 
Sbjct: 36   MFFDGYGYHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELR 95

Query: 971  NTATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTVRVKNATLPKGKYVKLQPHTK 792
            N A ER+SHCGVLEFIAEEGMIYMPYWMMEN+LLQEGD VRVKN TLPKG YVKLQPHTK
Sbjct: 96   NDAAERISHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTK 155

Query: 791  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPANAISIIETDCEVD 612
            DFLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYYIDIVETKP+NAISIIETDCEVD
Sbjct: 156  DFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVD 215

Query: 611  FAPPLDYKEPERAVPPVPSGKXXXXXXXXXXXXXPKFNPFTGVGRRLDGKPLKHQSSPVS 432
            FAPPLDYKEPER  P +P  K             PKFNPFTGV RRLDGKPLK Q  PVS
Sbjct: 216  FAPPLDYKEPERTTPSIPQKKATAQVEEVPEETEPKFNPFTGVARRLDGKPLKQQPFPVS 275

Query: 431  SSEPKDKRPEVAXXXXXXXXXXXXXXXXSRQHQGKLVFGSSANRAPKESQKSVEKETKKE 252
            S   KDK+  V                 +RQ QGKLVFGS+ NRAPKE+QK V KETK E
Sbjct: 276  SQGSKDKQAAV-PSGRGQPSLESSSQNSARQSQGKLVFGSNVNRAPKETQKEVAKETKPE 334

Query: 251  QPLKTEEPKFQAFTGKKYSLKG 186
            Q  K EEPKFQ FTG+KYSLKG
Sbjct: 335  QSQKNEEPKFQPFTGRKYSLKG 356


>ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|222849415|gb|EEE86962.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  493 bits (1269), Expect = e-137
 Identities = 249/324 (76%), Positives = 268/324 (82%), Gaps = 2/324 (0%)
 Frame = -3

Query: 1151 MYFEGYGYHGSSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELH 972
            M+F+GYGYHG+SFEQTYRCYPASFI+KPQ+ESGDKIIMPPSALDRLASLHIDYPMLFEL 
Sbjct: 1    MFFDGYGYHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQ 60

Query: 971  NTATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTVRVKNATLPKGKYVKLQPHTK 792
            N A ERVSHCGVLEFIAEEGMIYMPYWMMEN+LLQEGDTVRVKN TLPKGKYVKLQPHTK
Sbjct: 61   NDAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDTVRVKNVTLPKGKYVKLQPHTK 120

Query: 791  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPANAISIIETDCEVD 612
            DFLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYYIDI+ETKP+NAISIIETDCEVD
Sbjct: 121  DFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180

Query: 611  FAPPLDYKEPERAVPPVPSGKXXXXXXXXXXXXXPKFNPFTGVGRRLDGKPLKHQSSP-V 435
            FAPPLDYKEPE+ V  VP  K             PKFNPFTG GRRLDGKPL +Q  P +
Sbjct: 181  FAPPLDYKEPEKPVASVPPSKATSQAEEVPAETEPKFNPFTGAGRRLDGKPLSYQPPPAL 240

Query: 434  SSSEPKDKRPEVAXXXXXXXXXXXXXXXXSRQHQGKLVFGSSANRAPKESQKSVE-KETK 258
            SSS  KDK+P VA                +R+ QGKLVFGS+  R PKE+Q+    KETK
Sbjct: 241  SSSVSKDKQPAVA-DGSRQPSLGSSSQNTARKSQGKLVFGSNTGRTPKETQREESGKETK 299

Query: 257  KEQPLKTEEPKFQAFTGKKYSLKG 186
            +EQP K EEPKFQAFTGKKYSLKG
Sbjct: 300  QEQPEKKEEPKFQAFTGKKYSLKG 323


>gb|ABK95938.1| unknown [Populus trichocarpa]
          Length = 324

 Score =  491 bits (1264), Expect = e-136
 Identities = 248/323 (76%), Positives = 267/323 (82%), Gaps = 2/323 (0%)
 Frame = -3

Query: 1148 YFEGYGYHGSSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELHN 969
            +F+GYGYHG+SFEQTYRCYPASFI+KPQ+ESGDKIIMPPSALDRLASLHIDYPMLFEL N
Sbjct: 3    FFDGYGYHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQN 62

Query: 968  TATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTVRVKNATLPKGKYVKLQPHTKD 789
             A ERVSHCGVLEFIAEEGMIYMPYWMMEN+LLQEGDTVRVKN TLPKGKYVKLQPHTKD
Sbjct: 63   DAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDTVRVKNVTLPKGKYVKLQPHTKD 122

Query: 788  FLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPANAISIIETDCEVDF 609
            FLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYYIDI+ETKP+NAISIIETDCEVDF
Sbjct: 123  FLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDF 182

Query: 608  APPLDYKEPERAVPPVPSGKXXXXXXXXXXXXXPKFNPFTGVGRRLDGKPLKHQSSP-VS 432
            APPLDYKEPE+ V  VP  K             PKFNPFTG GRRLDGKPL +Q  P +S
Sbjct: 183  APPLDYKEPEKPVASVPPSKATSQAEEVPAETEPKFNPFTGAGRRLDGKPLSYQPPPALS 242

Query: 431  SSEPKDKRPEVAXXXXXXXXXXXXXXXXSRQHQGKLVFGSSANRAPKESQKSVE-KETKK 255
            SS  KDK+P VA                +R+ QGKLVFGS+  R PKE+Q+    KETK+
Sbjct: 243  SSVSKDKQPAVA-DGSRQPSLGSSSQNTARKSQGKLVFGSNTGRTPKETQREESGKETKQ 301

Query: 254  EQPLKTEEPKFQAFTGKKYSLKG 186
            EQP K EEPKFQAFTGKKYSLKG
Sbjct: 302  EQPEKKEEPKFQAFTGKKYSLKG 324


>ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Vitis
            vinifera]
          Length = 319

 Score =  487 bits (1254), Expect = e-135
 Identities = 247/322 (76%), Positives = 262/322 (81%)
 Frame = -3

Query: 1151 MYFEGYGYHGSSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELH 972
            MYF GYGYHG SFEQ YRCYPASFIDKPQ+ESG KIIMPPSALDRLASLHIDYPMLFEL 
Sbjct: 1    MYFGGYGYHGMSFEQKYRCYPASFIDKPQIESGGKIIMPPSALDRLASLHIDYPMLFELS 60

Query: 971  NTATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTVRVKNATLPKGKYVKLQPHTK 792
            N A +RVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTV+VKN TLPKG YVKLQPHT 
Sbjct: 61   NPAAQRVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTVQVKNVTLPKGTYVKLQPHTT 120

Query: 791  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPANAISIIETDCEVD 612
            DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKP+NAISIIETDCEVD
Sbjct: 121  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVD 180

Query: 611  FAPPLDYKEPERAVPPVPSGKXXXXXXXXXXXXXPKFNPFTGVGRRLDGKPLKHQSSPVS 432
            FAPPLD+KEPE+ V PVP GK             PKFNPF GVGRRLDGKP K++  PVS
Sbjct: 181  FAPPLDFKEPEKPVAPVPLGKAAAEVQEAPVEPEPKFNPFCGVGRRLDGKPQKYEPPPVS 240

Query: 431  SSEPKDKRPEVAXXXXXXXXXXXXXXXXSRQHQGKLVFGSSANRAPKESQKSVEKETKKE 252
            SS  KDK+P                   SRQ QGKLVFGS+ NR+PKE+QK   K TK+E
Sbjct: 241  SSGSKDKQP--VNRGSGQPSAGSSSQSSSRQSQGKLVFGSNVNRSPKETQKEAAKATKQE 298

Query: 251  QPLKTEEPKFQAFTGKKYSLKG 186
            +P K EEPKFQ F+GKKYSLKG
Sbjct: 299  EP-KKEEPKFQPFSGKKYSLKG 319


>ref|XP_003630940.1| Ubiquitin fusion degradation protein [Medicago truncatula]
            gi|355524962|gb|AET05416.1| Ubiquitin fusion degradation
            protein [Medicago truncatula]
          Length = 320

 Score =  481 bits (1237), Expect = e-133
 Identities = 245/322 (76%), Positives = 260/322 (80%)
 Frame = -3

Query: 1151 MYFEGYGYHGSSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELH 972
            M+F+GYGYHG+SFEQTYRCYPASFI+KPQLESGDKIIMPPSALDRLASLHIDYPMLFEL 
Sbjct: 1    MFFDGYGYHGTSFEQTYRCYPASFIEKPQLESGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 971  NTATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTVRVKNATLPKGKYVKLQPHTK 792
            N A ERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGD VRVKN TLPKG YVKLQPHTK
Sbjct: 61   NAAAERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120

Query: 791  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPANAISIIETDCEVD 612
            DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVE+KPANAISIIETDCEVD
Sbjct: 121  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVESKPANAISIIETDCEVD 180

Query: 611  FAPPLDYKEPERAVPPVPSGKXXXXXXXXXXXXXPKFNPFTGVGRRLDGKPLKHQSSPVS 432
            FAPPLDYKEPER V P  +GK             PKFNPFTG GRRLDGKPL +Q  PVS
Sbjct: 181  FAPPLDYKEPERPVAPRSAGKAPEADKEAPAETEPKFNPFTGSGRRLDGKPLNYQPPPVS 240

Query: 431  SSEPKDKRPEVAXXXXXXXXXXXXXXXXSRQHQGKLVFGSSANRAPKESQKSVEKETKKE 252
            SS  KDK P  A                + Q QGKLVFGS+ NR  KE+ K+ E + K+E
Sbjct: 241  SSGSKDKNP-AAQNVNSQPSTASSSQSNAPQTQGKLVFGSNPNRG-KETGKATEAKAKQE 298

Query: 251  QPLKTEEPKFQAFTGKKYSLKG 186
             P + EE KFQ FTGKKYSL+G
Sbjct: 299  PPKEKEEDKFQPFTGKKYSLRG 320