BLASTX nr result
ID: Coptis24_contig00000972
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000972 (1263 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519077.1| ATP-dependent Clp protease proteolytic subun... 358 2e-96 ref|XP_003537887.1| PREDICTED: ATP-dependent Clp protease proteo... 356 6e-96 gb|ACU18559.1| unknown [Glycine max] 352 9e-95 gb|AFK45588.1| unknown [Lotus japonicus] 351 2e-94 ref|XP_003541065.1| PREDICTED: ATP-dependent Clp protease proteo... 351 3e-94 >ref|XP_002519077.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus communis] gi|223541740|gb|EEF43288.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus communis] Length = 277 Score = 358 bits (918), Expect = 2e-96 Identities = 175/222 (78%), Positives = 190/222 (85%) Frame = +3 Query: 150 NNNTGLPFKFDDQIHHRPIHTSYGPIEAKKGNPPVMPAVMTPGGPLDLSSVLFRNRIIFI 329 + +GLP D++ HR SY IEAKKGNPP+MPAVMTPGGPLDL SVLFRNRIIFI Sbjct: 57 SRRSGLPLSIDEKNSHRATQ-SYITIEAKKGNPPIMPAVMTPGGPLDLQSVLFRNRIIFI 115 Query: 330 GQPINSQVAQRVISQLVTLATIDEDADILIYLNCPGGSTYSVLAIYDCMSWIKPKVGTVC 509 GQPINSQVAQRVISQLVTLATIDE++DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTVC Sbjct: 116 GQPINSQVAQRVISQLVTLATIDENSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVC 175 Query: 510 FXXXXXXXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQARHKIDK 689 F EKGMRYAMPNARIMIHQPQ GCGGHVEDVRRQVNEAVQ+RHK+D+ Sbjct: 176 FGVAASQGALLLAGGEKGMRYAMPNARIMIHQPQGGCGGHVEDVRRQVNEAVQSRHKVDR 235 Query: 690 MYAAFTGQPFEEIQNYTERDRFFSTSEALEFGLIDGVLETEY 815 MYAAFTGQP E++Q YTERDRF STSEA+EFGLIDG+LETEY Sbjct: 236 MYAAFTGQPLEKVQQYTERDRFLSTSEAMEFGLIDGILETEY 277 >ref|XP_003537887.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like [Glycine max] Length = 273 Score = 356 bits (914), Expect = 6e-96 Identities = 181/238 (76%), Positives = 194/238 (81%) Frame = +3 Query: 102 SGTQNPRGLSFVSNNVNNNTGLPFKFDDQIHHRPIHTSYGPIEAKKGNPPVMPAVMTPGG 281 S NP G S + + G P K D++ H TSYG IEAK GNPP+ PAVMTPGG Sbjct: 38 SSLPNPYGHSSGVGLSSKSRGFPLKLDEKNIHGA-STSYGAIEAK-GNPPITPAVMTPGG 95 Query: 282 PLDLSSVLFRNRIIFIGQPINSQVAQRVISQLVTLATIDEDADILIYLNCPGGSTYSVLA 461 PLDLSSVLFRNRIIFIGQP+NSQVAQRVISQLVTLATIDE+ADIL+Y+NCPGGSTYSVLA Sbjct: 96 PLDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENADILVYINCPGGSTYSVLA 155 Query: 462 IYDCMSWIKPKVGTVCFXXXXXXXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDV 641 IYDCMSWIKPKVGTVCF EKGMRYAMPNARIMIHQPQSGCGGHVEDV Sbjct: 156 IYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDV 215 Query: 642 RRQVNEAVQARHKIDKMYAAFTGQPFEEIQNYTERDRFFSTSEALEFGLIDGVLETEY 815 RRQVNEAVQ+RHKIDKMY+ FTGQP E++Q YTERDRF S SEALEFGLIDGVLETEY Sbjct: 216 RRQVNEAVQSRHKIDKMYSVFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273 >gb|ACU18559.1| unknown [Glycine max] Length = 273 Score = 352 bits (904), Expect = 9e-95 Identities = 179/238 (75%), Positives = 192/238 (80%) Frame = +3 Query: 102 SGTQNPRGLSFVSNNVNNNTGLPFKFDDQIHHRPIHTSYGPIEAKKGNPPVMPAVMTPGG 281 S NP G S + + G P K D++ H TSYG IEAK GNPP+ PAVMTPGG Sbjct: 38 SSLPNPYGHSSGVGLSSKSRGFPLKLDEKNIHGA-STSYGAIEAK-GNPPITPAVMTPGG 95 Query: 282 PLDLSSVLFRNRIIFIGQPINSQVAQRVISQLVTLATIDEDADILIYLNCPGGSTYSVLA 461 PLDLSSVLFRNRIIFIGQP+NSQVAQRVISQLVTLATIDE+ADIL+Y+NCPGGSTYSVLA Sbjct: 96 PLDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENADILVYINCPGGSTYSVLA 155 Query: 462 IYDCMSWIKPKVGTVCFXXXXXXXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDV 641 IYDCMSWIKPKVGTVCF EKGMRYAMPNARIMIHQPQSGCGGHVEDV Sbjct: 156 IYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDV 215 Query: 642 RRQVNEAVQARHKIDKMYAAFTGQPFEEIQNYTERDRFFSTSEALEFGLIDGVLETEY 815 RRQVNEAVQ+RHKIDKMY+ FTGQP E++Q YTERDRF S EALEFG IDGVLETEY Sbjct: 216 RRQVNEAVQSRHKIDKMYSVFTGQPLEKVQQYTERDRFLSVFEALEFGFIDGVLETEY 273 >gb|AFK45588.1| unknown [Lotus japonicus] Length = 275 Score = 351 bits (901), Expect = 2e-94 Identities = 172/222 (77%), Positives = 189/222 (85%) Frame = +3 Query: 150 NNNTGLPFKFDDQIHHRPIHTSYGPIEAKKGNPPVMPAVMTPGGPLDLSSVLFRNRIIFI 329 + + G P K D++ + TSYG IEAKKGNPP+ PAVMTPGGPLDLSSVLFRNRIIFI Sbjct: 55 SKSPGFPLKLDEKNTY-DASTSYGAIEAKKGNPPITPAVMTPGGPLDLSSVLFRNRIIFI 113 Query: 330 GQPINSQVAQRVISQLVTLATIDEDADILIYLNCPGGSTYSVLAIYDCMSWIKPKVGTVC 509 GQP+N+QVAQRVISQLVTLATID +ADIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTVC Sbjct: 114 GQPVNAQVAQRVISQLVTLATIDPNADILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVC 173 Query: 510 FXXXXXXXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQARHKIDK 689 F EKGMRY+MPN+RIMIHQPQSGCGGHVEDVRRQVNEAVQ+RHKIDK Sbjct: 174 FGVAASQGALLLAGGEKGMRYSMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDK 233 Query: 690 MYAAFTGQPFEEIQNYTERDRFFSTSEALEFGLIDGVLETEY 815 MY+AFTGQP E++Q YTERD F S SEALEFGLIDGVLETEY Sbjct: 234 MYSAFTGQPIEKVQQYTERDHFLSVSEALEFGLIDGVLETEY 275 >ref|XP_003541065.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like [Glycine max] Length = 273 Score = 351 bits (900), Expect = 3e-94 Identities = 178/238 (74%), Positives = 193/238 (81%) Frame = +3 Query: 102 SGTQNPRGLSFVSNNVNNNTGLPFKFDDQIHHRPIHTSYGPIEAKKGNPPVMPAVMTPGG 281 S NP G S + + G P K D++ H TSYG IEAK GNPP+ PAVMTPGG Sbjct: 38 SSLPNPYGHSSEVGLSSKSRGFPLKHDEKNIHGA-STSYGAIEAK-GNPPITPAVMTPGG 95 Query: 282 PLDLSSVLFRNRIIFIGQPINSQVAQRVISQLVTLATIDEDADILIYLNCPGGSTYSVLA 461 PLDL+SVLFRNRIIFIGQP+NSQVAQRVISQLVTLATI+E+ADIL+Y+NCPGGSTYSVLA Sbjct: 96 PLDLTSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATINENADILVYINCPGGSTYSVLA 155 Query: 462 IYDCMSWIKPKVGTVCFXXXXXXXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDV 641 IYDCMSWIKPKVGTVCF EKGMRYAMPNARI IHQPQSGCGGHVEDV Sbjct: 156 IYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARITIHQPQSGCGGHVEDV 215 Query: 642 RRQVNEAVQARHKIDKMYAAFTGQPFEEIQNYTERDRFFSTSEALEFGLIDGVLETEY 815 RRQVNEAVQ+RHKIDKMY+ FTGQP E++Q YTERDRF S SEALEFGLIDGVLETEY Sbjct: 216 RRQVNEAVQSRHKIDKMYSVFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273