BLASTX nr result

ID: Coptis24_contig00000960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000960
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277936.1| PREDICTED: long chain acyl-CoA synthetase 7,...   444   e-123
ref|XP_003592424.1| Annotation was added to scaffolds in Novembe...   435   e-120
ref|XP_003592423.1| Annotation was added to scaffolds in Novembe...   435   e-120
ref|XP_002517212.1| Acyl-CoA synthetase [Ricinus communis] gi|83...   432   e-119
ref|XP_003555336.1| PREDICTED: long chain acyl-CoA synthetase 7,...   424   e-117

>ref|XP_002277936.1| PREDICTED: long chain acyl-CoA synthetase 7, peroxisomal [Vitis
           vinifera] gi|297737021|emb|CBI26222.3| unnamed protein
           product [Vitis vinifera]
          Length = 697

 Score =  444 bits (1143), Expect = e-123
 Identities = 210/251 (83%), Positives = 235/251 (93%)
 Frame = -2

Query: 753 TLHDNFVHAVETFQDNKYLGTRIRVDGTVGEYKWMTYGEAGTARSAIGSGLAFHGIPNGA 574
           TLHDNFVH+VETF+D KYLGTRIRVDGTVGEYKWMTYGEAGTARSAIGSGL ++GIP G+
Sbjct: 81  TLHDNFVHSVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARSAIGSGLIYYGIPKGS 140

Query: 573 SVGLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKFIVNHAVVQVIFCVPQTLNTM 394
            VGLYFINRPEWLIVDHACSA+SY+SVPLYDTLGPDAVK+IVNHAV+Q IFCVPQTLN++
Sbjct: 141 CVGLYFINRPEWLIVDHACSAFSYVSVPLYDTLGPDAVKYIVNHAVLQAIFCVPQTLNSL 200

Query: 393 LTYLSEIPSVCLIVVVGGIDEHMPSLPSSSGVEVISYSKLLNQGRSNLQPFYPPKPEDIA 214
           L++LSEIPSV LIVVVGGID+ MPSLPS++GVEV+SYSKLLNQGRS  QPF PPKP+D+A
Sbjct: 201 LSFLSEIPSVRLIVVVGGIDDQMPSLPSTTGVEVVSYSKLLNQGRSRPQPFCPPKPDDVA 260

Query: 213 TICYTSGTTGPPKGAVLSHENLIANTSGTSISVKFFPSDVYISYLPLAHIYERANQVMSV 34
           TICYTSGTTG PKGAVLSH NLIAN +G ++SVKF+PSDVYISYLPLAHIYERANQVM+ 
Sbjct: 261 TICYTSGTTGTPKGAVLSHGNLIANVAGATLSVKFYPSDVYISYLPLAHIYERANQVMTA 320

Query: 33  YYGTAVGFYQG 1
           Y+G AVGFYQG
Sbjct: 321 YFGVAVGFYQG 331


>ref|XP_003592424.1| Annotation was added to scaffolds in November 2011~Long chain fatty
           acid-CoA ligase [Medicago truncatula]
           gi|355481472|gb|AES62675.1| Annotation was added to
           scaffolds in November 2011~Long chain fatty acid-CoA
           ligase [Medicago truncatula]
          Length = 697

 Score =  435 bits (1119), Expect = e-120
 Identities = 207/251 (82%), Positives = 231/251 (92%)
 Frame = -2

Query: 753 TLHDNFVHAVETFQDNKYLGTRIRVDGTVGEYKWMTYGEAGTARSAIGSGLAFHGIPNGA 574
           TLHDNFV AV+TF+D KYLGTR+RVDGTVGEYKWMTYG+AGTARSAIGSGL  +GIP GA
Sbjct: 82  TLHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGKAGTARSAIGSGLIHYGIPKGA 141

Query: 573 SVGLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKFIVNHAVVQVIFCVPQTLNTM 394
            +GLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVK+IVNHA+VQVIFCV QTLN++
Sbjct: 142 GIGLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYIVNHALVQVIFCVSQTLNSL 201

Query: 393 LTYLSEIPSVCLIVVVGGIDEHMPSLPSSSGVEVISYSKLLNQGRSNLQPFYPPKPEDIA 214
           L+YLSEIP+V LIVVVGGID+ +PSLPSS GV++ISY+KL +QGRSNLQPF PPKPED+A
Sbjct: 202 LSYLSEIPTVRLIVVVGGIDDQIPSLPSSDGVQIISYTKLFSQGRSNLQPFCPPKPEDVA 261

Query: 213 TICYTSGTTGPPKGAVLSHENLIANTSGTSISVKFFPSDVYISYLPLAHIYERANQVMSV 34
           TICYTSGTTG PKGAVL+HEN IAN +G +I  KF PSDVYISYLPLAHIYERANQVM+V
Sbjct: 262 TICYTSGTTGTPKGAVLTHENFIANVAGATIDEKFNPSDVYISYLPLAHIYERANQVMTV 321

Query: 33  YYGTAVGFYQG 1
           Y+G AVGFYQG
Sbjct: 322 YFGMAVGFYQG 332


>ref|XP_003592423.1| Annotation was added to scaffolds in November 2011~Long chain fatty
           acid-CoA ligase [Medicago truncatula]
           gi|355481471|gb|AES62674.1| Annotation was added to
           scaffolds in November 2011~Long chain fatty acid-CoA
           ligase [Medicago truncatula]
          Length = 713

 Score =  435 bits (1119), Expect = e-120
 Identities = 207/251 (82%), Positives = 231/251 (92%)
 Frame = -2

Query: 753 TLHDNFVHAVETFQDNKYLGTRIRVDGTVGEYKWMTYGEAGTARSAIGSGLAFHGIPNGA 574
           TLHDNFV AV+TF+D KYLGTR+RVDGTVGEYKWMTYG+AGTARSAIGSGL  +GIP GA
Sbjct: 82  TLHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGKAGTARSAIGSGLIHYGIPKGA 141

Query: 573 SVGLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKFIVNHAVVQVIFCVPQTLNTM 394
            +GLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVK+IVNHA+VQVIFCV QTLN++
Sbjct: 142 GIGLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYIVNHALVQVIFCVSQTLNSL 201

Query: 393 LTYLSEIPSVCLIVVVGGIDEHMPSLPSSSGVEVISYSKLLNQGRSNLQPFYPPKPEDIA 214
           L+YLSEIP+V LIVVVGGID+ +PSLPSS GV++ISY+KL +QGRSNLQPF PPKPED+A
Sbjct: 202 LSYLSEIPTVRLIVVVGGIDDQIPSLPSSDGVQIISYTKLFSQGRSNLQPFCPPKPEDVA 261

Query: 213 TICYTSGTTGPPKGAVLSHENLIANTSGTSISVKFFPSDVYISYLPLAHIYERANQVMSV 34
           TICYTSGTTG PKGAVL+HEN IAN +G +I  KF PSDVYISYLPLAHIYERANQVM+V
Sbjct: 262 TICYTSGTTGTPKGAVLTHENFIANVAGATIDEKFNPSDVYISYLPLAHIYERANQVMTV 321

Query: 33  YYGTAVGFYQG 1
           Y+G AVGFYQG
Sbjct: 322 YFGMAVGFYQG 332


>ref|XP_002517212.1| Acyl-CoA synthetase [Ricinus communis] gi|83320525|gb|ABC02881.1|
           ACS2 [Ricinus communis] gi|223543847|gb|EEF45375.1|
           Acyl-CoA synthetase [Ricinus communis]
          Length = 694

 Score =  432 bits (1110), Expect = e-119
 Identities = 204/251 (81%), Positives = 229/251 (91%)
 Frame = -2

Query: 753 TLHDNFVHAVETFQDNKYLGTRIRVDGTVGEYKWMTYGEAGTARSAIGSGLAFHGIPNGA 574
           TLHDNF  +V+TF+D KYLGTRIRVDGTVGEYKWMTYGEAGTAR+AIGSGL  HGIP G+
Sbjct: 80  TLHDNFARSVDTFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLMHHGIPKGS 139

Query: 573 SVGLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKFIVNHAVVQVIFCVPQTLNTM 394
           SVGLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKFIVNHA VQ IFCVPQTL  +
Sbjct: 140 SVGLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKFIVNHADVQAIFCVPQTLTPL 199

Query: 393 LTYLSEIPSVCLIVVVGGIDEHMPSLPSSSGVEVISYSKLLNQGRSNLQPFYPPKPEDIA 214
           L++LSEI SV LIVVVGG+D+ MPSLPSS+GV+V++YSKLL+QG SNLQPF PPKPED+A
Sbjct: 200 LSFLSEISSVRLIVVVGGMDDQMPSLPSSTGVQVVTYSKLLSQGHSNLQPFCPPKPEDVA 259

Query: 213 TICYTSGTTGPPKGAVLSHENLIANTSGTSISVKFFPSDVYISYLPLAHIYERANQVMSV 34
           TICYTSGTTG PKGA L+H NLIAN +G +++ KF+PSD+YISYLPLAHIYERANQV++V
Sbjct: 260 TICYTSGTTGTPKGAALTHGNLIANVAGATLATKFYPSDIYISYLPLAHIYERANQVLTV 319

Query: 33  YYGTAVGFYQG 1
           YYG AVGFYQG
Sbjct: 320 YYGVAVGFYQG 330


>ref|XP_003555336.1| PREDICTED: long chain acyl-CoA synthetase 7, peroxisomal [Glycine
           max]
          Length = 698

 Score =  424 bits (1091), Expect = e-117
 Identities = 198/251 (78%), Positives = 234/251 (93%)
 Frame = -2

Query: 753 TLHDNFVHAVETFQDNKYLGTRIRVDGTVGEYKWMTYGEAGTARSAIGSGLAFHGIPNGA 574
           T+HDNFV +V+TF+D KYLGTR+RVDGTVGEYKWMTYGEAGTARSAIGSGL ++GI  G+
Sbjct: 83  TMHDNFVRSVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARSAIGSGLIYYGIQKGS 142

Query: 573 SVGLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKFIVNHAVVQVIFCVPQTLNTM 394
           S+GLYFINRPEWLIVDHACSAYS++SVPLYDTLGPDAVK+IV+HAVVQVIFCVP+TLN +
Sbjct: 143 SIGLYFINRPEWLIVDHACSAYSFVSVPLYDTLGPDAVKYIVSHAVVQVIFCVPETLNLL 202

Query: 393 LTYLSEIPSVCLIVVVGGIDEHMPSLPSSSGVEVISYSKLLNQGRSNLQPFYPPKPEDIA 214
           L+YLS+IP+V LIVVVGG+D+ +PS+PSS+GV+VI+YSKLLNQGRSNLQPF PPKP+DIA
Sbjct: 203 LSYLSDIPTVRLIVVVGGMDDQIPSVPSSTGVQVITYSKLLNQGRSNLQPFCPPKPDDIA 262

Query: 213 TICYTSGTTGPPKGAVLSHENLIANTSGTSISVKFFPSDVYISYLPLAHIYERANQVMSV 34
           TICYTSGTTG PKGA+L+H N IA+ +G+++  KF PSDVYISYLPLAHIYERANQVM+V
Sbjct: 263 TICYTSGTTGTPKGAILTHGNFIASVAGSTMDEKFGPSDVYISYLPLAHIYERANQVMTV 322

Query: 33  YYGTAVGFYQG 1
           ++G AVGFYQG
Sbjct: 323 HFGIAVGFYQG 333


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