BLASTX nr result

ID: Coptis24_contig00000953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000953
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542954.1| PREDICTED: small glutamine-rich tetratricope...    98   3e-18
ref|XP_003542953.1| PREDICTED: small glutamine-rich tetratricope...    98   3e-18
ref|XP_002306633.1| predicted protein [Populus trichocarpa] gi|2...    97   4e-18
ref|XP_004173748.1| PREDICTED: small glutamine-rich tetratricope...    96   1e-17
ref|XP_004142626.1| PREDICTED: small glutamine-rich tetratricope...    96   1e-17

>ref|XP_003542954.1| PREDICTED: small glutamine-rich tetratricopeptide repeat-containing
           protein-like isoform 2 [Glycine max]
          Length = 415

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 49/87 (56%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
 Frame = +2

Query: 116 AIVFYKINKYVEAIRDCKKSIEIDPNCSRPYAYLGYAYFAQGKYRDAIDKGLMKALQLDP 295
           A  + +INKY EAI+DC +SIEIDPN S+ Y+ LG  Y+AQG YRDAI KG  KALQLDP
Sbjct: 207 AAAYTQINKYTEAIQDCLRSIEIDPNYSKAYSRLGLVYYAQGNYRDAIHKGFRKALQLDP 266

Query: 296 DTARLAEYLQVAEER-LGDVHRTNQNQ 373
           +   + E ++VAE + L + HR  QNQ
Sbjct: 267 NNESVKENIRVAERKLLEEQHRAYQNQ 293


>ref|XP_003542953.1| PREDICTED: small glutamine-rich tetratricopeptide repeat-containing
           protein-like isoform 1 [Glycine max]
          Length = 438

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 49/87 (56%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
 Frame = +2

Query: 116 AIVFYKINKYVEAIRDCKKSIEIDPNCSRPYAYLGYAYFAQGKYRDAIDKGLMKALQLDP 295
           A  + +INKY EAI+DC +SIEIDPN S+ Y+ LG  Y+AQG YRDAI KG  KALQLDP
Sbjct: 230 AAAYTQINKYTEAIQDCLRSIEIDPNYSKAYSRLGLVYYAQGNYRDAIHKGFRKALQLDP 289

Query: 296 DTARLAEYLQVAEER-LGDVHRTNQNQ 373
           +   + E ++VAE + L + HR  QNQ
Sbjct: 290 NNESVKENIRVAERKLLEEQHRAYQNQ 316


>ref|XP_002306633.1| predicted protein [Populus trichocarpa] gi|222856082|gb|EEE93629.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 49/87 (56%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
 Frame = +2

Query: 116 AIVFYKINKYVEAIRDCKKSIEIDPNCSRPYAYLGYAYFAQGKYRDAIDKGLMKALQLDP 295
           A  + +I+KY EAIRDC KS+EIDP  S+ Y+ LG AY+AQG YRDAIDKG  KALQLDP
Sbjct: 105 AAAYTQIHKYTEAIRDCLKSVEIDPGYSKAYSRLGLAYYAQGNYRDAIDKGFKKALQLDP 164

Query: 296 DTARLAEYLQVAEERLGDVH-RTNQNQ 373
               + E ++VAE++L +   RT Q Q
Sbjct: 165 SNETVKENIRVAEQKLIEQQKRTEQGQ 191


>ref|XP_004173748.1| PREDICTED: small glutamine-rich tetratricopeptide repeat-containing
           protein beta-like, partial [Cucumis sativus]
          Length = 120

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = +2

Query: 116 AIVFYKINKYVEAIRDCKKSIEIDPNCSRPYAYLGYAYFAQGKYRDAIDKGLMKALQLDP 295
           A  + +I KY EA RDC KSIEIDPN S+ Y+ LG A + QG YRDAIDKG M+ALQLDP
Sbjct: 34  AAAYTQIQKYSEATRDCLKSIEIDPNYSKAYSRLGLALYDQGNYRDAIDKGFMRALQLDP 93

Query: 296 DTARLAEYLQVAEERLGDVHRTNQNQ 373
           +   + E ++VAE++L +  R  Q++
Sbjct: 94  NNEAVRENIRVAEQKLKEAQRQTQHE 119


>ref|XP_004142626.1| PREDICTED: small glutamine-rich tetratricopeptide repeat-containing
           protein-like [Cucumis sativus]
          Length = 427

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = +2

Query: 116 AIVFYKINKYVEAIRDCKKSIEIDPNCSRPYAYLGYAYFAQGKYRDAIDKGLMKALQLDP 295
           A  + +I KY EA RDC KSIEIDPN S+ Y+ LG A + QG YRDAIDKG M+ALQLDP
Sbjct: 203 AAAYTQIQKYSEATRDCLKSIEIDPNYSKAYSRLGLALYDQGNYRDAIDKGFMRALQLDP 262

Query: 296 DTARLAEYLQVAEERLGDVHRTNQNQ 373
           +   + E ++VAE++L +  R  Q++
Sbjct: 263 NNEAVRENIRVAEQKLKEAQRQTQHE 288


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