BLASTX nr result

ID: Coptis24_contig00000952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000952
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268568.1| PREDICTED: uncharacterized protein LOC100241...   310   6e-82
ref|XP_002321415.1| predicted protein [Populus trichocarpa] gi|2...   303   4e-80
ref|XP_002318413.1| predicted protein [Populus trichocarpa] gi|2...   302   1e-79
ref|XP_002513547.1| conserved hypothetical protein [Ricinus comm...   299   1e-78
ref|NP_001242883.1| uncharacterized protein LOC100814332 [Glycin...   294   3e-77

>ref|XP_002268568.1| PREDICTED: uncharacterized protein LOC100241849 [Vitis vinifera]
            gi|302144033|emb|CBI23138.3| unnamed protein product
            [Vitis vinifera]
          Length = 292

 Score =  310 bits (793), Expect = 6e-82
 Identities = 160/284 (56%), Positives = 202/284 (71%), Gaps = 2/284 (0%)
 Frame = -3

Query: 1112 MYAETGLLYPYXXXXXXXXXXXXELCGIQKSNGSLSNLISTSAILEYDLGAEGDLFKAPE 933
            MYAE GLLYPY            E C  QK+N S+S+L   S I+EYDLGAEGDLFKAPE
Sbjct: 9    MYAEAGLLYPYFQCFSQELQQLEEFCFSQKTNASMSHLAQMSTIMEYDLGAEGDLFKAPE 68

Query: 932  PIIEEPVVVFDPVASAISMISCGEGVMSPETMKSGDIGSMQNESLLSEVFYECKKDLLAN 753
            PIIEEPV+  DP+ +A+SMI CGE V+SP+ +K  DI S+Q+E LLSEVFYECKKDLLA 
Sbjct: 69   PIIEEPVMGLDPMTAAMSMIPCGEDVISPQGLKVSDIESIQSEQLLSEVFYECKKDLLAK 128

Query: 752  SAMKESFNEA-EITLPALQMEEALNPEEFSFVSQRSVYKSVSAGCLPSMEWIPASAARPN 576
            + ++   +E  +I +P  +M E    EE   + +    KSVS+GCL SMEW+  +A RPN
Sbjct: 129  TVIESPLSEVLDIKIPVARMGETQAAEE-KALYEGLFQKSVSSGCLSSMEWVNGTAMRPN 187

Query: 575  FLDFQGVDFETVYGMRRAYSEGDMQTLSPGNTNLVHSSIERTSSIGNYA-IEERLQKLSR 399
            FLDF G+DF   YGMRRA+S+GD++TL  G  +L+ + ++    + NY   E+R +KLSR
Sbjct: 188  FLDFPGMDFGAAYGMRRAFSDGDIKTLGNGQMSLIRTPLDHPVVVSNYTPTEDRQKKLSR 247

Query: 398  YRKKKTKRNFGRTIKYACRKALADSQPRVRGRFAKTEESETLKK 267
            YR K+TKRNFGR IKYACRKALADSQPR+RGRFAKTEE +  K+
Sbjct: 248  YRNKRTKRNFGRKIKYACRKALADSQPRIRGRFAKTEELDMTKR 291


>ref|XP_002321415.1| predicted protein [Populus trichocarpa] gi|222868411|gb|EEF05542.1|
            predicted protein [Populus trichocarpa]
          Length = 314

 Score =  303 bits (777), Expect = 4e-80
 Identities = 166/315 (52%), Positives = 210/315 (66%), Gaps = 33/315 (10%)
 Frame = -3

Query: 1112 MYAETGLLYPYXXXXXXXXXXXXELCGIQKSNGSLS------------------------ 1005
            MYAET LL+PY            E C  QK+N S+S                        
Sbjct: 1    MYAETWLLFPYMQDFSQDIQQLEEYCKCQKTNASMSFELSFLCTSIWCLLSALTCSVWFL 60

Query: 1004 -------NLISTSAILEYDLGAEGDLFKAPEPIIEEPVVVFDPVASAISMISCGEGVMSP 846
                   NL+ T+ I EYDLG EGDLFKAPEPIIEEP+VV DP+ +AISMISCGE V+S 
Sbjct: 61   RKWGASSNLLQTT-ISEYDLGGEGDLFKAPEPIIEEPLVVIDPMTAAISMISCGEEVISS 119

Query: 845  ETMKSGDIGSMQNESLLSEVFYECKKDLLANSAMKE-SFNEA-EITLPALQMEEALNPEE 672
            + +K+ DI S QNE LL+EVFYECKKD+L   AM+  S  E  +I +P ++ +E  N +E
Sbjct: 120  QGLKAADIESFQNEQLLNEVFYECKKDILEKEAMETPSLAELLDIKIPIVRTDEN-NIQE 178

Query: 671  FSFVSQRSVYKSVSAGCLPSMEWIPASAARPNFLDFQGVDFETVYGMRRAYSEGDMQTLS 492
               +   ++ KSVS+GCL S+EW+  +A +P+FLDF G+DFE  YGMRRAYSEGD++TL 
Sbjct: 179  NKLLPDAALLKSVSSGCLRSVEWLHGAAVKPSFLDFPGIDFENAYGMRRAYSEGDIKTLG 238

Query: 491  PGNTNLVHSSIERTSSIGNYAIEERLQKLSRYRKKKTKRNFGRTIKYACRKALADSQPRV 312
             GN +L+HS+++R   I N + E+R +KLSRYR KKTKRNFGR IKYACRKALADSQPR+
Sbjct: 239  NGNPSLIHSTLDRPLIINNCSAEDRREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRI 298

Query: 311  RGRFAKTEESETLKK 267
            RGRFAKTEE +  K+
Sbjct: 299  RGRFAKTEECDVSKR 313


>ref|XP_002318413.1| predicted protein [Populus trichocarpa] gi|222859086|gb|EEE96633.1|
            predicted protein [Populus trichocarpa]
          Length = 279

 Score =  302 bits (774), Expect = 1e-79
 Identities = 159/284 (55%), Positives = 202/284 (71%), Gaps = 2/284 (0%)
 Frame = -3

Query: 1112 MYAETGLLYPYXXXXXXXXXXXXELCGIQKSNGSLSNLISTSAILEYDLGAEGDLFKAPE 933
            MY E+GLL+PY            E C  QK+N      +  + I EYDLG EGDLFKAP+
Sbjct: 1    MYEESGLLFPYMQNFFQDIQQLEEYCKYQKTN------VPMTTISEYDLGGEGDLFKAPK 54

Query: 932  PIIEEPVVVFDPVASAISMISCGEGVMSPETMKSGDIGSMQNESLLSEVFYECKKDLLAN 753
            PIIEEP+V  DP+ASAISMISCGE V++ + +K  DI S+QNE LL+EVFYECKKDLL  
Sbjct: 55   PIIEEPLVGIDPMASAISMISCGEEVITSQGLKVTDIESIQNEQLLNEVFYECKKDLLEK 114

Query: 752  SAMK-ESFNEA-EITLPALQMEEALNPEEFSFVSQRSVYKSVSAGCLPSMEWIPASAARP 579
             AM  +S  E  +I LP ++ ++    +E       ++ KSVS+GCL S+EW+  +A +P
Sbjct: 115  EAMDTQSLAELLDIKLPVVRTDDENPIKENKLPPDAALSKSVSSGCLSSIEWVHGAAVKP 174

Query: 578  NFLDFQGVDFETVYGMRRAYSEGDMQTLSPGNTNLVHSSIERTSSIGNYAIEERLQKLSR 399
            +FLDF G+DFE  YGMRRA+SEGD++TL  GNT+L+ S ++R   I NY+ E+R +KLSR
Sbjct: 175  SFLDFPGIDFENAYGMRRAFSEGDIKTLGNGNTSLICSPLDRPLIINNYSAEDRQEKLSR 234

Query: 398  YRKKKTKRNFGRTIKYACRKALADSQPRVRGRFAKTEESETLKK 267
            YR KKTKRNFGR IKYACRKALADSQPR+RGRFAKTEE +  K+
Sbjct: 235  YRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEWDVSKR 278


>ref|XP_002513547.1| conserved hypothetical protein [Ricinus communis]
            gi|223547455|gb|EEF48950.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 283

 Score =  299 bits (765), Expect = 1e-78
 Identities = 154/283 (54%), Positives = 202/283 (71%), Gaps = 1/283 (0%)
 Frame = -3

Query: 1112 MYAETGLLYPYXXXXXXXXXXXXELCGIQKSNGSLSNLISTSAILEYDLGAEGDLFKAPE 933
            MYA++GLL+PY            E    QK+N  +SN+I TS I EYDLG EGDLFKAPE
Sbjct: 1    MYADSGLLFPYLQNFSPDIQQLEEYYNYQKTNALMSNMIPTSTISEYDLGGEGDLFKAPE 60

Query: 932  PIIEEPVVVFDPVASAISMISCGEGVMSPETMKSGDIGSMQNESLLSEVFYECKKDLLAN 753
            PIIEEP++  DP+ +AISMISCGE V+S + +K+ DI S+Q E LLSEVFYECKKDL+  
Sbjct: 61   PIIEEPLIGLDPMTAAISMISCGEEVISSQGLKAADIESIQTEPLLSEVFYECKKDLMEK 120

Query: 752  SAMKESFNEA-EITLPALQMEEALNPEEFSFVSQRSVYKSVSAGCLPSMEWIPASAARPN 576
            + ++   +E  +I +P ++  E    +  ++ S   + KSVS+GCL S+EW+  +A +PN
Sbjct: 121  ANIEIPVSEILDIKIPVVRTVEN-QIQGNNYFSDAQLPKSVSSGCLSSLEWVHGAAVKPN 179

Query: 575  FLDFQGVDFETVYGMRRAYSEGDMQTLSPGNTNLVHSSIERTSSIGNYAIEERLQKLSRY 396
            FL+F G+D    YGMRRAYSEGD++TL   N +L+ SS++R   I +   E R++KLSRY
Sbjct: 180  FLEFSGMDLGAAYGMRRAYSEGDIKTLGNENMSLIQSSLDRPLIISSCIAEGRMEKLSRY 239

Query: 395  RKKKTKRNFGRTIKYACRKALADSQPRVRGRFAKTEESETLKK 267
            R KKTKRNFGR IKYACRKALADSQPRVRGRFAKTE+S+  ++
Sbjct: 240  RNKKTKRNFGRKIKYACRKALADSQPRVRGRFAKTEDSDVYRR 282


>ref|NP_001242883.1| uncharacterized protein LOC100814332 [Glycine max]
            gi|255637132|gb|ACU18897.1| unknown [Glycine max]
          Length = 281

 Score =  294 bits (753), Expect = 3e-77
 Identities = 153/283 (54%), Positives = 198/283 (69%), Gaps = 1/283 (0%)
 Frame = -3

Query: 1112 MYAETGLLYPYXXXXXXXXXXXXELCGIQKSNGSLSNLISTSAILEYDLGAEGDLFKAPE 933
            MYAETGLL+PY            E C  QKSN S+ +L+ +S + EYDL AEGDLFKAPE
Sbjct: 1    MYAETGLLFPYLNNISHGLHQLEEYCKTQKSNASMDDLVQSSVMSEYDLAAEGDLFKAPE 60

Query: 932  PIIEEPVVVFDPVASAISMISCGEGVMSPETMKSGDIGSMQNESLLSEVFYECKKDLLAN 753
            PIIEEP++  DP+ + ISMISCGE V S + +KS DI  +QN+  L EVFYEC+KDLL  
Sbjct: 61   PIIEEPIMDMDPMTATISMISCGEDVSS-QGLKSTDIDILQNDQFLHEVFYECEKDLLEK 119

Query: 752  SAMKESFNEA-EITLPALQMEEALNPEEFSFVSQRSVYKSVSAGCLPSMEWIPASAARPN 576
            +A++  F+E  EI +P L ++E    +E   +    + KSVS+G L SM+W+  +A +P 
Sbjct: 120  AAIEPPFSEILEIKVPLLNIDEN-TIQENKLLPDMQLAKSVSSGSLSSMDWMRGAAMKPA 178

Query: 575  FLDFQGVDFETVYGMRRAYSEGDMQTLSPGNTNLVHSSIERTSSIGNYAIEERLQKLSRY 396
            F+D   +DF   YGMRR++SEGD++TL  GN ++V S +ER   I N   EER QKLSRY
Sbjct: 179  FIDIPAIDFNADYGMRRSFSEGDIKTLGNGNMSIVQSPLERPLLISNCTSEERFQKLSRY 238

Query: 395  RKKKTKRNFGRTIKYACRKALADSQPRVRGRFAKTEESETLKK 267
            R K+TKRNFGR IKYACRKALADSQPR+RGRFA+TEES+  ++
Sbjct: 239  RNKRTKRNFGRKIKYACRKALADSQPRIRGRFARTEESDVKRE 281


Top