BLASTX nr result

ID: Coptis24_contig00000946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000946
         (2054 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304448.1| predicted protein [Populus trichocarpa] gi|2...   681   0.0  
ref|XP_002509645.1| acc synthase, putative [Ricinus communis] gi...   677   0.0  
ref|XP_002268932.1| PREDICTED: probable aminotransferase ACS12-l...   668   0.0  
emb|CAN66821.1| hypothetical protein VITISV_003497 [Vitis vinifera]   668   0.0  
gb|AAQ88100.1| 1-aminocyclopropane-1-carboxylate synthase [Rosa ...   662   0.0  

>ref|XP_002304448.1| predicted protein [Populus trichocarpa] gi|222841880|gb|EEE79427.1|
            predicted protein [Populus trichocarpa]
          Length = 551

 Score =  681 bits (1756), Expect = 0.0
 Identities = 341/525 (64%), Positives = 404/525 (76%), Gaps = 3/525 (0%)
 Frame = +2

Query: 299  AMRIIVPXXXXXXXXXXXXXXSIIPCALFYFLQIYLXXXXXXXXXXXXXXXXXGHILSPS 478
            AMR+IVP              S+IPCALFYFLQ+YL                  +  SPS
Sbjct: 30   AMRVIVPLQGVVQGRGGLFLGSVIPCALFYFLQLYLRRKHRDDPNDQDDPARDPNAPSPS 89

Query: 479  TSLSQLNELNSSTGLTRSQSRTHLSPRASTGPAYISSRANSIVKAEESAYYVGLKKVNED 658
             S  +L EL+   G  R+ SR  LSPR+  GP ++S RAN IVK+ +S YYVGLKKV ED
Sbjct: 90   GSAGKLAELS---GFPRNLSRNLLSPRSPRGPVFLSGRANGIVKSGDSPYYVGLKKVLED 146

Query: 659  PYDCVENPNGVIQLGLAENKLSLDLIHNWVLENSKSFXXXXXXXXXXXXX---ATYQPFD 829
            PYD   NPNGVIQLG+ ENKL+LDL+  W++EN+K                  ATYQP  
Sbjct: 147  PYDEAGNPNGVIQLGVDENKLTLDLVKEWLVENAKEAILGGGGEGEELSIGGIATYQPSH 206

Query: 830  GLTELKVAVAGFMSEVMERQVSFNPSQMVLTAGATPAIEILSFCLADTGNAFLVPSPYYP 1009
            GLT+LKVAVAGFMS++ME  VSFNPS MVLTAGA PAIE+LSFCLAD+GNAFLVP+PYYP
Sbjct: 207  GLTQLKVAVAGFMSQIMENAVSFNPSLMVLTAGANPAIEMLSFCLADSGNAFLVPTPYYP 266

Query: 1010 GFDRDVKWRTGVELIPVPCRSADNFSISINALDRAFNQAKKRGMKVRGVLISNPANPVGN 1189
            GFD DVKWRTGVE+IPVPCRSADNFS+SI ALDR FNQAKKRG+KVRG++ISNP+NPVGN
Sbjct: 267  GFDWDVKWRTGVEIIPVPCRSADNFSLSITALDRGFNQAKKRGLKVRGIMISNPSNPVGN 326

Query: 1190 LLSRDMLYSLLDFAREKNIHIICDEIFAGSTHGNEEFVSMAEILESEDFDRNRVHIVYGL 1369
            LL+R+ LYSLLDFAREKNIHI+ +EIFAGSTHG+EEF SMAE+++S+  DR+RVHIVYGL
Sbjct: 327  LLNRETLYSLLDFAREKNIHIVSNEIFAGSTHGSEEFASMAELIDSDYLDRDRVHIVYGL 386

Query: 1370 SKDLCLPGFRVGVLYSHNESILAAAKKLTRFSSISVPTQRFLISMLSDTRFIREFIDANR 1549
            SKDL LPGFRVGV+YS NE++LAAAKKLTRFSS+S PTQ  L+S+LSDT F+++ I  NR
Sbjct: 387  SKDLSLPGFRVGVIYSFNENVLAAAKKLTRFSSVSAPTQHLLVSLLSDTDFVQKLIKNNR 446

Query: 1550 ERLRRVYAEFVAALKNSGIECTKSSGGFYCWANMSGLMGSYSEKGELELWDRLLNIGKIN 1729
            ERL++ YA FVA LK  GIEC KS GGF CWA+MS L+ SYSEKGELELWD+LLN  K+N
Sbjct: 447  ERLQKTYATFVAGLKQLGIECAKSKGGFSCWADMSELINSYSEKGELELWDKLLNTAKLN 506

Query: 1730 VTPGSSCHCIEPGWFRCCFSTLSEKDIPVVMERIRKVSEICKSRS 1864
            VTPGS C CIEPGWF+ CF+ L+E+DIPVVM+RI K+  +CK+ S
Sbjct: 507  VTPGSCCRCIEPGWFQFCFANLTERDIPVVMDRILKIVNVCKASS 551


>ref|XP_002509645.1| acc synthase, putative [Ricinus communis] gi|223549544|gb|EEF51032.1|
            acc synthase, putative [Ricinus communis]
          Length = 556

 Score =  677 bits (1746), Expect = 0.0
 Identities = 339/528 (64%), Positives = 407/528 (77%), Gaps = 6/528 (1%)
 Frame = +2

Query: 299  AMRIIVPXXXXXXXXXXXXXXSIIPCALFYFLQIYLXXXXXXXXXXXXXXXXXGHILSPS 478
            AMRIIVP              S+IPCALFYFLQ+YL                       +
Sbjct: 32   AMRIIVPLQGVVQGRGGLFLGSVIPCALFYFLQLYLKRFRTDDEQPDSSSDDPNSHTQTA 91

Query: 479  TSLS----QLNELNSSTGLTRSQSRTHLSPRASTGPAYISSRANSIVKAEESAYYVGLKK 646
             SLS    QL EL+   G  RS SR H+SPR+ + P YISSRAN IVK+ +  Y VGL+K
Sbjct: 92   PSLSGSEGQLMELS---GFHRSSSRNHISPRSPSRPPYISSRANGIVKSGDWVYSVGLRK 148

Query: 647  VNEDPYDCVENPNGVIQLGLAENKLSLDLIHNWVLENSKS--FXXXXXXXXXXXXXATYQ 820
            V EDPYD   NPNGVIQ+GLAENKL+LDL+  W++EN++                 A YQ
Sbjct: 149  VVEDPYDEFGNPNGVIQVGLAENKLNLDLVEEWLVENARGAILGGGAGEELSITGIANYQ 208

Query: 821  PFDGLTELKVAVAGFMSEVMERQVSFNPSQMVLTAGATPAIEILSFCLADTGNAFLVPSP 1000
            P DGL +LKVAVA FMS++ME++V F+PSQ+VLTAG TPAIE+LSFCLAD GNAFLVP+P
Sbjct: 209  PCDGLMKLKVAVADFMSQIMEKEVPFDPSQIVLTAGETPAIEMLSFCLADAGNAFLVPTP 268

Query: 1001 YYPGFDRDVKWRTGVELIPVPCRSADNFSISINALDRAFNQAKKRGMKVRGVLISNPANP 1180
            Y PGFDRDVKWRTGV++IPVPCRSADNF++SI ALDRAFNQAKKRG+KVRG++ SNP++P
Sbjct: 269  YCPGFDRDVKWRTGVDIIPVPCRSADNFNLSITALDRAFNQAKKRGLKVRGIIFSNPSHP 328

Query: 1181 VGNLLSRDMLYSLLDFAREKNIHIICDEIFAGSTHGNEEFVSMAEILESEDFDRNRVHIV 1360
            VGNLL+R+ LYSLLDFAREKNIHI+C+EIFAGST+GNEEFVSMAE+++ ED DR+RVHIV
Sbjct: 329  VGNLLNREALYSLLDFAREKNIHIVCNEIFAGSTYGNEEFVSMAELIDLEDSDRDRVHIV 388

Query: 1361 YGLSKDLCLPGFRVGVLYSHNESILAAAKKLTRFSSISVPTQRFLISMLSDTRFIREFID 1540
            Y LSKDL LPGF+VGV++S NE+++AAAKKLTRFSSIS PT R LISMLSD +F+R+ I 
Sbjct: 389  YALSKDLSLPGFKVGVIFSSNENVVAAAKKLTRFSSISAPTHRLLISMLSDIKFVRDIIQ 448

Query: 1541 ANRERLRRVYAEFVAALKNSGIECTKSSGGFYCWANMSGLMGSYSEKGELELWDRLLNIG 1720
             NR RL+++Y  F A LK  GI+C KS+GGFYCWA+MS L+ SYSEKGELELWD+LLN  
Sbjct: 449  TNRNRLQKMYVAFAAGLKQLGIKCIKSNGGFYCWADMSELISSYSEKGELELWDKLLNSA 508

Query: 1721 KINVTPGSSCHCIEPGWFRCCFSTLSEKDIPVVMERIRKVSEICKSRS 1864
            K+N TPGSSCHCIEPGWF  CF+TL+E+DIPVVM+RIRK++E CKS S
Sbjct: 509  KLNATPGSSCHCIEPGWFGFCFTTLTERDIPVVMDRIRKIAETCKSLS 556


>ref|XP_002268932.1| PREDICTED: probable aminotransferase ACS12-like [Vitis vinifera]
          Length = 503

 Score =  668 bits (1724), Expect = 0.0
 Identities = 329/516 (63%), Positives = 404/516 (78%), Gaps = 1/516 (0%)
 Frame = +2

Query: 302  MRIIVPXXXXXXXXXXXXXXSIIPCALFYFLQIYLXXXXXXXXXXXXXXXXXGHILSPST 481
            MR+IVP              S+IP AL+YF Q+YL                     SPS+
Sbjct: 1    MRLIVPLQGVVQGRGGLILGSVIPGALYYFFQLYLKRCRSAKPNSNPP--------SPSS 52

Query: 482  SLSQLNELNSSTGLTRSQSRTHLSPRASTGPAYISSRANSIVKAEESAYYVGLKKVNEDP 661
            S +QL +L+      RS SR++LS R S GP  +S+RANSI K   S YY+GL++ +EDP
Sbjct: 53   SSAQLADLS------RSSSRSNLSSRGSVGPVRVSARANSIAKPNASPYYIGLERASEDP 106

Query: 662  YDCVENPNGVIQLGLAENKLSLDLIHNWVLEN-SKSFXXXXXXXXXXXXXATYQPFDGLT 838
            YD  +NP+G++QLGL+EN+LSLDLI  W+LEN  +S              ATYQP DG+ 
Sbjct: 107  YDRFDNPDGIMQLGLSENRLSLDLIETWILENLERSMIGGADGNLNISGIATYQPLDGMM 166

Query: 839  ELKVAVAGFMSEVMERQVSFNPSQMVLTAGATPAIEILSFCLADTGNAFLVPSPYYPGFD 1018
            E+K+AVAGFMS+VM   VSF+PS++VLT+GATPAIE L FCLAD GNAFLVP+PYYPGFD
Sbjct: 167  EMKIAVAGFMSQVMGTTVSFDPSRLVLTSGATPAIETLCFCLADQGNAFLVPTPYYPGFD 226

Query: 1019 RDVKWRTGVELIPVPCRSADNFSISINALDRAFNQAKKRGMKVRGVLISNPANPVGNLLS 1198
            RD+KWRTGVELIPV CRS+DNF++S+ ALD+AFNQA+KRG +VRG+LISNP+NP+GN+L+
Sbjct: 227  RDMKWRTGVELIPVHCRSSDNFALSVTALDQAFNQARKRGQRVRGILISNPSNPIGNMLN 286

Query: 1199 RDMLYSLLDFAREKNIHIICDEIFAGSTHGNEEFVSMAEILESEDFDRNRVHIVYGLSKD 1378
            ++ LYSLLDFAREKNIHII DEIFAGST+G+EEFVSMAEILESEDFD++RVHI+YGLSKD
Sbjct: 287  KETLYSLLDFAREKNIHIISDEIFAGSTYGSEEFVSMAEILESEDFDKDRVHIIYGLSKD 346

Query: 1379 LCLPGFRVGVLYSHNESILAAAKKLTRFSSISVPTQRFLISMLSDTRFIREFIDANRERL 1558
            L LPGFRVGV+YS N S+LAAAKKL RFSS+S PTQR LISMLSDTRFI+ +I+  RER+
Sbjct: 347  LSLPGFRVGVIYSFNTSVLAAAKKLARFSSVSAPTQRILISMLSDTRFIQRYIETTRERI 406

Query: 1559 RRVYAEFVAALKNSGIECTKSSGGFYCWANMSGLMGSYSEKGELELWDRLLNIGKINVTP 1738
            +++Y  F A LK  GIECTKSS G YCWA+MSGL+  Y+EKGELELWD+LL IGKINVTP
Sbjct: 407  QKMYVAFAAGLKQLGIECTKSSAGLYCWADMSGLIRPYNEKGELELWDKLLKIGKINVTP 466

Query: 1739 GSSCHCIEPGWFRCCFSTLSEKDIPVVMERIRKVSE 1846
            GS+CHCIEPGWFRCCF+ L+E+DIPVV++RI++V E
Sbjct: 467  GSACHCIEPGWFRCCFTMLAEEDIPVVIKRIQRVVE 502


>emb|CAN66821.1| hypothetical protein VITISV_003497 [Vitis vinifera]
          Length = 540

 Score =  668 bits (1723), Expect = 0.0
 Identities = 329/518 (63%), Positives = 405/518 (78%), Gaps = 1/518 (0%)
 Frame = +2

Query: 299  AMRIIVPXXXXXXXXXXXXXXSIIPCALFYFLQIYLXXXXXXXXXXXXXXXXXGHILSPS 478
            AMR+IVP              S+IP AL+YF Q+YL                     SPS
Sbjct: 35   AMRLIVPLQGVVQGRGGLILGSVIPGALYYFFQLYLKRCRSAKPNSNPP--------SPS 86

Query: 479  TSLSQLNELNSSTGLTRSQSRTHLSPRASTGPAYISSRANSIVKAEESAYYVGLKKVNED 658
            +S +QL +L+      RS SR++LS R S GP  +S+RANSI K   S YY+GL++ +ED
Sbjct: 87   SSSAQLADLS------RSSSRSNLSSRGSVGPVRVSARANSIAKPNASPYYIGLERASED 140

Query: 659  PYDCVENPNGVIQLGLAENKLSLDLIHNWVLEN-SKSFXXXXXXXXXXXXXATYQPFDGL 835
            PYD  +NP+G++QLGL+EN+LSLDLI  W+LEN  +S              ATYQP DG+
Sbjct: 141  PYDRFDNPDGIMQLGLSENRLSLDLIETWILENLERSMIGGADGNLNISGIATYQPLDGM 200

Query: 836  TELKVAVAGFMSEVMERQVSFNPSQMVLTAGATPAIEILSFCLADTGNAFLVPSPYYPGF 1015
             E+K+AVAGFMS+VM   VSF+PS++VLT+GATPAIE L FCLAD GNAFLVP+PYYPGF
Sbjct: 201  MEMKIAVAGFMSQVMGTTVSFDPSRLVLTSGATPAIETLCFCLADQGNAFLVPTPYYPGF 260

Query: 1016 DRDVKWRTGVELIPVPCRSADNFSISINALDRAFNQAKKRGMKVRGVLISNPANPVGNLL 1195
            DRD+KWRTGVELIPV CRS+DNF++S+ ALD+AFNQA+KRG +VRG+LISNP+NP+GN+L
Sbjct: 261  DRDMKWRTGVELIPVHCRSSDNFALSVTALDQAFNQARKRGQRVRGILISNPSNPIGNML 320

Query: 1196 SRDMLYSLLDFAREKNIHIICDEIFAGSTHGNEEFVSMAEILESEDFDRNRVHIVYGLSK 1375
            +++ LYSLLDFAREKNIHII DEIFAGST+G+EEFVSMAEIL SEDFD++RVHI+YGLSK
Sbjct: 321  NKETLYSLLDFAREKNIHIISDEIFAGSTYGSEEFVSMAEILGSEDFDKDRVHIIYGLSK 380

Query: 1376 DLCLPGFRVGVLYSHNESILAAAKKLTRFSSISVPTQRFLISMLSDTRFIREFIDANRER 1555
            DL LPGFRVGV+YS N S+LAAAKKL RFSS+S PTQR LISMLSDTRFI+ +I+  RER
Sbjct: 381  DLSLPGFRVGVIYSFNTSVLAAAKKLARFSSVSAPTQRILISMLSDTRFIQRYIETTRER 440

Query: 1556 LRRVYAEFVAALKNSGIECTKSSGGFYCWANMSGLMGSYSEKGELELWDRLLNIGKINVT 1735
            ++++Y  F A LK  GIECTKSS G YCWA+MSGL+  Y+EKGELELWD+LL IGKINVT
Sbjct: 441  IQKMYVAFAAGLKQLGIECTKSSAGLYCWADMSGLIRPYNEKGELELWDKLLKIGKINVT 500

Query: 1736 PGSSCHCIEPGWFRCCFSTLSEKDIPVVMERIRKVSEI 1849
            PGS+CHCIEPGWFRCCF+ L+E+DIPVV++RI++V E+
Sbjct: 501  PGSACHCIEPGWFRCCFTMLAEEDIPVVIKRIQRVVEL 538


>gb|AAQ88100.1| 1-aminocyclopropane-1-carboxylate synthase [Rosa hybrid cultivar]
          Length = 480

 Score =  662 bits (1709), Expect = 0.0
 Identities = 321/448 (71%), Positives = 383/448 (85%)
 Frame = +2

Query: 521  LTRSQSRTHLSPRASTGPAYISSRANSIVKAEESAYYVGLKKVNEDPYDCVENPNGVIQL 700
            L RS SR+HLSPR + GP ++S RANS++K  E  YYVGL+KV EDPYD + NP+GVIQL
Sbjct: 35   LPRSMSRSHLSPR-NPGPVHVSGRANSVLKGGEPPYYVGLRKVAEDPYDELGNPDGVIQL 93

Query: 701  GLAENKLSLDLIHNWVLENSKSFXXXXXXXXXXXXXATYQPFDGLTELKVAVAGFMSEVM 880
            GL ENKL+LDL+ +W+LEN+K               A YQP DGL ELK+AVAGFMS+ +
Sbjct: 94   GLDENKLALDLVRDWLLENAKD-AILGGEELGISGIACYQPSDGLMELKLAVAGFMSKAI 152

Query: 881  ERQVSFNPSQMVLTAGATPAIEILSFCLADTGNAFLVPSPYYPGFDRDVKWRTGVELIPV 1060
               V++NPSQ+VLTAGATPAIEILSFCLAD+GNAFLVP+PYYPG DRDVKWRTGVE+IPV
Sbjct: 153  GNSVTYNPSQIVLTAGATPAIEILSFCLADSGNAFLVPAPYYPGLDRDVKWRTGVEIIPV 212

Query: 1061 PCRSADNFSISINALDRAFNQAKKRGMKVRGVLISNPANPVGNLLSRDMLYSLLDFAREK 1240
            PCRSAD F++SI ALDRAFNQAKKRG+KVRG++ISNP+NP G+LL+R+ LY+LLDFAREK
Sbjct: 213  PCRSADKFNLSITALDRAFNQAKKRGVKVRGIIISNPSNPGGSLLTRESLYNLLDFAREK 272

Query: 1241 NIHIICDEIFAGSTHGNEEFVSMAEILESEDFDRNRVHIVYGLSKDLCLPGFRVGVLYSH 1420
            NIHII +E+FAGST+G+EEFVSMAEI++ ED D+NRVHIVYG+SKDL LPGFRVG +YS 
Sbjct: 273  NIHIISNELFAGSTYGSEEFVSMAEIVDLEDLDQNRVHIVYGISKDLSLPGFRVGAIYSF 332

Query: 1421 NESILAAAKKLTRFSSISVPTQRFLISMLSDTRFIREFIDANRERLRRVYAEFVAALKNS 1600
            N+++L AAKKLTRFSSIS P+QR LISMLSDT+F+ +FI+ NRERLR +Y  FV  LK  
Sbjct: 333  NKNVLTAAKKLTRFSSISAPSQRLLISMLSDTKFMHKFIEINRERLRGMYLRFVTGLKQL 392

Query: 1601 GIECTKSSGGFYCWANMSGLMGSYSEKGELELWDRLLNIGKINVTPGSSCHCIEPGWFRC 1780
            GIECTKS+GGFYCWA++SGL+ SYSEKGELELWDRLLN+GK+NVTPGSSCHCIEPGWFR 
Sbjct: 393  GIECTKSNGGFYCWADLSGLIRSYSEKGELELWDRLLNVGKLNVTPGSSCHCIEPGWFRF 452

Query: 1781 CFSTLSEKDIPVVMERIRKVSEICKSRS 1864
            CF+TL+EKDIPVV+ERIR ++E CKS S
Sbjct: 453  CFTTLTEKDIPVVIERIRNIAETCKSHS 480


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