BLASTX nr result

ID: Coptis24_contig00000936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000936
         (1715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631655.1| PREDICTED: probable phenylalanyl-tRNA synthe...   709   0.0  
ref|XP_004150173.1| PREDICTED: probable phenylalanine--tRNA liga...   697   0.0  
ref|XP_003537873.1| PREDICTED: probable phenylalanyl-tRNA synthe...   692   0.0  
ref|XP_003541045.1| PREDICTED: probable phenylalanyl-tRNA synthe...   692   0.0  
ref|XP_003606906.1| Phenylalanyl-tRNA synthetase beta subunit [M...   692   0.0  

>ref|XP_003631655.1| PREDICTED: probable phenylalanyl-tRNA synthetase alpha chain-like
            [Vitis vinifera] gi|297741458|emb|CBI32589.3| unnamed
            protein product [Vitis vinifera]
          Length = 488

 Score =  709 bits (1829), Expect = 0.0
 Identities = 344/486 (70%), Positives = 396/486 (81%)
 Frame = +3

Query: 33   EKAILSCLNTQQEIQDSGDFSKSVNIDHSDIVNVVKSLHGFGLVLAQEIKRENWVLSDEG 212
            E+AIL  L    EI DSGDF+    IDH++IVNV+KSLHGF LV AQ+IKRE WVL+DEG
Sbjct: 3    EEAILGHLEKNVEISDSGDFASQSGIDHNEIVNVIKSLHGFRLVDAQDIKREKWVLTDEG 62

Query: 213  NQYAEAGSPEVQLFNAVPPQGIARDELQKKVAPLILKIGSQYAVKSKWIEMGKQQVTRKV 392
              YA AGSPEVQLF AVPP+GI+R+ELQ+KV P + KIG   A+K+KW+E+GKQQV+RKV
Sbjct: 63   KLYAAAGSPEVQLFLAVPPEGISREELQRKVDPSVYKIGCSQAIKNKWLEIGKQQVSRKV 122

Query: 393  QCVEDHVKDLLLQIKDGKGIGSEDINLLKRRKLIELQTWNGFSLKKGPNFVLERKKLATD 572
            Q VED  KDLL +I++ + +   DI+ LKRRKLI LQTW G+S++KGPN+  +RKK+ATD
Sbjct: 123  QQVEDTAKDLLTRIQNEEALSQADIDALKRRKLIALQTWKGYSVRKGPNYAPKRKKVATD 182

Query: 573  LTRELLQSGDWKNMELKPYNFSAKAXXXXXXXXXXXXKVRERFRNIFIEMGFEEMPTNNY 752
            LTRE LQ GDWK +E K YNF+AK             KVR + + IF++MGFEEMPTNN+
Sbjct: 183  LTRENLQRGDWKELEFKEYNFNAKGQSAEGGHLHPLLKVRRQLQMIFLQMGFEEMPTNNF 242

Query: 753  VESSFWNFDVLFQPQQHPARDSHDTFFLQVPSTTLALPEDYLLRVKRVHXXXXXXXXXXX 932
            VESSFWNFD LFQPQQHPARDSHDTFFLQ PSTT  LPEDY+ RVK VH           
Sbjct: 243  VESSFWNFDALFQPQQHPARDSHDTFFLQAPSTTKMLPEDYVERVKHVHEHGGYGSRGYG 302

Query: 933  XNWKREEAEKNVLRTHTTAVSARMLYALAQKPFIPRRYFSIDRVFRNEAVDRTHLAEFHQ 1112
             +WKREEA KN+LRTHTTAVS+RMLY LAQKPF P++Y+SIDRVFRNEAVDRTHLAEFHQ
Sbjct: 303  YDWKREEANKNLLRTHTTAVSSRMLYLLAQKPFAPKKYYSIDRVFRNEAVDRTHLAEFHQ 362

Query: 1113 IEGVVCDRGLTLGDLMGVLYEFFRKLGMSKLRFKSTYNPYTEPSMEIYSYHEGFKKWVEV 1292
            IEG+VCDRGLTLGDL+GVL +FF +LGMS+LRFK  YNPYTEPSMEI+SYHEG KKWVE+
Sbjct: 363  IEGLVCDRGLTLGDLIGVLQDFFSRLGMSQLRFKPAYNPYTEPSMEIFSYHEGLKKWVEI 422

Query: 1293 GNSGMFRPEMLLPMGFPEDVTAIAWGLSLERPTMILYGIDNIRDLFGPKVDLSLIKRNPI 1472
            GNSGMFRPEMLLPMG PEDV  IAWGLSLERPTMILYG+DNIRDLFG KVDL LIKRNPI
Sbjct: 423  GNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGVDNIRDLFGHKVDLGLIKRNPI 482

Query: 1473 CRLGID 1490
            CRLGI+
Sbjct: 483  CRLGIE 488


>ref|XP_004150173.1| PREDICTED: probable phenylalanine--tRNA ligase alpha subunit-like
            [Cucumis sativus]
          Length = 492

 Score =  697 bits (1798), Expect = 0.0
 Identities = 335/486 (68%), Positives = 389/486 (80%)
 Frame = +3

Query: 33   EKAILSCLNTQQEIQDSGDFSKSVNIDHSDIVNVVKSLHGFGLVLAQEIKRENWVLSDEG 212
            E+AIL  L    EI DSG F+    +DH+++VNV+KSL+GF  V A++IK E WVL+ EG
Sbjct: 3    EEAILGYLEKNTEISDSGRFADEFGLDHNEVVNVIKSLNGFRYVDAEDIKMEKWVLTKEG 62

Query: 213  NQYAEAGSPEVQLFNAVPPQGIARDELQKKVAPLILKIGSQYAVKSKWIEMGKQQVTRKV 392
              Y   GSPE+QLF A+PP+GI R+ELQKK+ P I KIG   A K+KW+EMGKQ ++RKV
Sbjct: 63   ETYTATGSPEMQLFLAIPPEGIPREELQKKLGPSIFKIGCAQAAKNKWVEMGKQMISRKV 122

Query: 393  QCVEDHVKDLLLQIKDGKGIGSEDINLLKRRKLIELQTWNGFSLKKGPNFVLERKKLATD 572
              VED VK+ LLQIKDGK I  ED+  LK RKLI  QTW G+S+++GPN+   RKK+ATD
Sbjct: 123  HHVEDKVKNSLLQIKDGKEIYDEDVKALKARKLIVSQTWKGYSVRRGPNYAPRRKKVATD 182

Query: 573  LTRELLQSGDWKNMELKPYNFSAKAXXXXXXXXXXXXKVRERFRNIFIEMGFEEMPTNNY 752
            LTRE LQ GDW+ +E K YNF+AK             KVR++ +NIF +MGFEEMPTNNY
Sbjct: 183  LTRENLQRGDWRELEFKEYNFNAKGQPLFCGHLHPLLKVRQQIKNIFRQMGFEEMPTNNY 242

Query: 753  VESSFWNFDVLFQPQQHPARDSHDTFFLQVPSTTLALPEDYLLRVKRVHXXXXXXXXXXX 932
            VESSFWNFD LFQPQQHPARD+HDTFFL+ PSTT  LPEDY+ RVK+VH           
Sbjct: 243  VESSFWNFDTLFQPQQHPARDAHDTFFLKAPSTTRELPEDYVERVKQVHETGGYGSRGYG 302

Query: 933  XNWKREEAEKNVLRTHTTAVSARMLYALAQKPFIPRRYFSIDRVFRNEAVDRTHLAEFHQ 1112
             NWKREEA KN+LRTHTTAV++RMLY LAQKPF P++YFSIDRVFRNEAVDRTHLAEFHQ
Sbjct: 303  YNWKREEANKNLLRTHTTAVTSRMLYMLAQKPFAPKKYFSIDRVFRNEAVDRTHLAEFHQ 362

Query: 1113 IEGVVCDRGLTLGDLMGVLYEFFRKLGMSKLRFKSTYNPYTEPSMEIYSYHEGFKKWVEV 1292
            IEG++C RGLTLGDL+GVLY+FF +LGMSKLRFK  YNPYTEPSMEI+SYHEGFKKWVEV
Sbjct: 363  IEGLICGRGLTLGDLIGVLYDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGFKKWVEV 422

Query: 1293 GNSGMFRPEMLLPMGFPEDVTAIAWGLSLERPTMILYGIDNIRDLFGPKVDLSLIKRNPI 1472
            GNSGMFRPEMLLPMGFPED   IAWGLSLERPTMI+YGIDNIRDLFG KVDLSL+K+NPI
Sbjct: 423  GNSGMFRPEMLLPMGFPEDARIIAWGLSLERPTMIMYGIDNIRDLFGHKVDLSLVKKNPI 482

Query: 1473 CRLGID 1490
            CRLGI+
Sbjct: 483  CRLGIE 488


>ref|XP_003537873.1| PREDICTED: probable phenylalanyl-tRNA synthetase alpha chain-like
            isoform 1 [Glycine max]
          Length = 488

 Score =  692 bits (1786), Expect = 0.0
 Identities = 334/486 (68%), Positives = 391/486 (80%)
 Frame = +3

Query: 33   EKAILSCLNTQQEIQDSGDFSKSVNIDHSDIVNVVKSLHGFGLVLAQEIKRENWVLSDEG 212
            E+AIL  L    EI+DSG+F+    I+H++IVNV+KSLHGF  V AQ+IKRE WVL+DEG
Sbjct: 3    EEAILGFLEKNDEIRDSGEFAAERGIEHNEIVNVIKSLHGFRYVDAQDIKRETWVLTDEG 62

Query: 213  NQYAEAGSPEVQLFNAVPPQGIARDELQKKVAPLILKIGSQYAVKSKWIEMGKQQVTRKV 392
              YA  GSPEVQLF A+P +GI+++ELQKK+ P + KIG   A K+KW+EMGKQ ++RKV
Sbjct: 63   ETYATVGSPEVQLFLAIPQEGISKEELQKKLDPSLFKIGCAQAAKNKWVEMGKQLISRKV 122

Query: 393  QCVEDHVKDLLLQIKDGKGIGSEDINLLKRRKLIELQTWNGFSLKKGPNFVLERKKLATD 572
            Q V+D VKDLLLQI+ G  IGS++I  LK RKLI  QTW G+SLK+GPN+  +RKK+ TD
Sbjct: 123  QHVDDKVKDLLLQIQQGLNIGSDEIKALKVRKLIIPQTWKGYSLKRGPNYAPKRKKVVTD 182

Query: 573  LTRELLQSGDWKNMELKPYNFSAKAXXXXXXXXXXXXKVRERFRNIFIEMGFEEMPTNNY 752
            LTR+  QSG+WK +E K YN+SAK             KVR + + IF+ MGFEEMPTNN+
Sbjct: 183  LTRDNFQSGEWKELEFKEYNYSAKGAPLEGGNLHPLLKVRAQLKQIFLCMGFEEMPTNNF 242

Query: 753  VESSFWNFDVLFQPQQHPARDSHDTFFLQVPSTTLALPEDYLLRVKRVHXXXXXXXXXXX 932
            VESSFWNFD LFQPQQHPARDSHDTFFL+ PSTT  LPEDY+ RVK VH           
Sbjct: 243  VESSFWNFDALFQPQQHPARDSHDTFFLETPSTTKILPEDYVQRVKHVHESGGYGSRGYA 302

Query: 933  XNWKREEAEKNVLRTHTTAVSARMLYALAQKPFIPRRYFSIDRVFRNEAVDRTHLAEFHQ 1112
             +WKREEA KN+LRTHTTAVS+RMLY LAQKPF P++YFSIDRVFRNEAVDRTHLAEFHQ
Sbjct: 303  YDWKREEANKNLLRTHTTAVSSRMLYQLAQKPFAPKKYFSIDRVFRNEAVDRTHLAEFHQ 362

Query: 1113 IEGVVCDRGLTLGDLMGVLYEFFRKLGMSKLRFKSTYNPYTEPSMEIYSYHEGFKKWVEV 1292
            IEG+VCDRGLTL DL+G+L++FF +LGM+KL+FK  YNPYTEPSMEI+SYHEGFKKWVE+
Sbjct: 363  IEGLVCDRGLTLCDLIGILHDFFSRLGMTKLKFKPAYNPYTEPSMEIFSYHEGFKKWVEI 422

Query: 1293 GNSGMFRPEMLLPMGFPEDVTAIAWGLSLERPTMILYGIDNIRDLFGPKVDLSLIKRNPI 1472
            GNSGMFRPEML PMG PEDV  IAWGLSLERPTMILYGIDNIRDLFG KVDL LIK+NP+
Sbjct: 423  GNSGMFRPEMLQPMGLPEDVQVIAWGLSLERPTMILYGIDNIRDLFGHKVDLGLIKKNPV 482

Query: 1473 CRLGID 1490
            CRLGID
Sbjct: 483  CRLGID 488


>ref|XP_003541045.1| PREDICTED: probable phenylalanyl-tRNA synthetase alpha chain-like
            [Glycine max]
          Length = 488

 Score =  692 bits (1785), Expect = 0.0
 Identities = 337/486 (69%), Positives = 391/486 (80%)
 Frame = +3

Query: 33   EKAILSCLNTQQEIQDSGDFSKSVNIDHSDIVNVVKSLHGFGLVLAQEIKRENWVLSDEG 212
            E+AIL  L    EI+DSG+F+    IDH++IVNVVKSLHGF  V AQ+IKRE WVL+DEG
Sbjct: 3    EEAILGYLEKNDEIKDSGEFAAECGIDHNEIVNVVKSLHGFRYVDAQDIKRETWVLTDEG 62

Query: 213  NQYAEAGSPEVQLFNAVPPQGIARDELQKKVAPLILKIGSQYAVKSKWIEMGKQQVTRKV 392
              YA  GSPEVQLF AVP +GI+++ELQKK+ P + KIG   A K+KW++MGKQ ++RKV
Sbjct: 63   KTYATVGSPEVQLFLAVPQEGISKEELQKKLDPSVFKIGCAQAAKNKWVDMGKQLMSRKV 122

Query: 393  QCVEDHVKDLLLQIKDGKGIGSEDINLLKRRKLIELQTWNGFSLKKGPNFVLERKKLATD 572
            Q V+D VKDLLLQI+ G  IGS++I  LK RKLI  QTW G+SLK+GPN+  +RKK+ TD
Sbjct: 123  QHVDDKVKDLLLQIQQGLNIGSDEIKALKVRKLIVPQTWKGYSLKRGPNYAPKRKKVVTD 182

Query: 573  LTRELLQSGDWKNMELKPYNFSAKAXXXXXXXXXXXXKVRERFRNIFIEMGFEEMPTNNY 752
            LTR+  QSG+WK +E K YN+SAK             KVR + + IF+ MGFEEMPTNN+
Sbjct: 183  LTRDNFQSGEWKELEFKEYNYSAKGQPLEGGSLHPLLKVRAQLKQIFLCMGFEEMPTNNF 242

Query: 753  VESSFWNFDVLFQPQQHPARDSHDTFFLQVPSTTLALPEDYLLRVKRVHXXXXXXXXXXX 932
            VESSFWNFD LFQPQQHPARDSHDTFFL+ PSTT  LPEDY+ RV++VH           
Sbjct: 243  VESSFWNFDALFQPQQHPARDSHDTFFLETPSTTKILPEDYVQRVRQVHESGGYGSRGYA 302

Query: 933  XNWKREEAEKNVLRTHTTAVSARMLYALAQKPFIPRRYFSIDRVFRNEAVDRTHLAEFHQ 1112
             +WKREEA KN+LRTHTTAVS+RMLY LAQKPF P++YFSIDRVFRNEAVDRTHLAEFHQ
Sbjct: 303  YDWKREEANKNLLRTHTTAVSSRMLYQLAQKPFAPKKYFSIDRVFRNEAVDRTHLAEFHQ 362

Query: 1113 IEGVVCDRGLTLGDLMGVLYEFFRKLGMSKLRFKSTYNPYTEPSMEIYSYHEGFKKWVEV 1292
            IEG+VCD GLTL DL+GVL++FF +LGM+KL+FK  YNPYTEPSMEI+SYHEGFKKWVEV
Sbjct: 363  IEGLVCDLGLTLCDLIGVLHDFFSRLGMTKLKFKPAYNPYTEPSMEIFSYHEGFKKWVEV 422

Query: 1293 GNSGMFRPEMLLPMGFPEDVTAIAWGLSLERPTMILYGIDNIRDLFGPKVDLSLIKRNPI 1472
            GNSGMFRPEML PMG PEDV  IAWGLSLERPTMILYGIDNIRDLFG KVDL LIK+NPI
Sbjct: 423  GNSGMFRPEMLQPMGLPEDVQVIAWGLSLERPTMILYGIDNIRDLFGHKVDLGLIKKNPI 482

Query: 1473 CRLGID 1490
            CRLGID
Sbjct: 483  CRLGID 488


>ref|XP_003606906.1| Phenylalanyl-tRNA synthetase beta subunit [Medicago truncatula]
            gi|355507961|gb|AES89103.1| Phenylalanyl-tRNA synthetase
            beta subunit [Medicago truncatula]
          Length = 560

 Score =  692 bits (1785), Expect = 0.0
 Identities = 336/486 (69%), Positives = 389/486 (80%)
 Frame = +3

Query: 33   EKAILSCLNTQQEIQDSGDFSKSVNIDHSDIVNVVKSLHGFGLVLAQEIKRENWVLSDEG 212
            E+A+L  L    EI DSG+F+    IDH++IVNVVKSLHGF  V A +IKRE WVL+DEG
Sbjct: 75   EEAVLGYLQNNDEINDSGEFAAERGIDHNEIVNVVKSLHGFRYVDAVDIKRETWVLTDEG 134

Query: 213  NQYAEAGSPEVQLFNAVPPQGIARDELQKKVAPLILKIGSQYAVKSKWIEMGKQQVTRKV 392
            N YA  GSPE QL  A+PP+GI+RDELQKK+ P + KI    A K+KW+EMGKQ ++RKV
Sbjct: 135  NTYATLGSPEFQLILAIPPEGISRDELQKKLGPSVFKIACAQAAKNKWVEMGKQLISRKV 194

Query: 393  QCVEDHVKDLLLQIKDGKGIGSEDINLLKRRKLIELQTWNGFSLKKGPNFVLERKKLATD 572
            Q VED VK+LLLQI+ G+GIGS+DI  LK RKLI  QTW G+S+KKGPN+  +RKK+ TD
Sbjct: 195  QDVEDRVKNLLLQIQQGQGIGSDDIKALKARKLIVPQTWKGYSVKKGPNYAPKRKKVVTD 254

Query: 573  LTRELLQSGDWKNMELKPYNFSAKAXXXXXXXXXXXXKVRERFRNIFIEMGFEEMPTNNY 752
            LTR+  QSG+WK +E K YN++AK             KVR + + IF  MGFEEMPTNNY
Sbjct: 255  LTRDNFQSGEWKEIEFKEYNYTAKGQPLEGGSLHPLLKVRAQIKQIFHCMGFEEMPTNNY 314

Query: 753  VESSFWNFDVLFQPQQHPARDSHDTFFLQVPSTTLALPEDYLLRVKRVHXXXXXXXXXXX 932
            VESSFWNFD LFQPQQHPARDSHDTFFL+ PSTT  LPEDY+ RVK++H           
Sbjct: 315  VESSFWNFDSLFQPQQHPARDSHDTFFLEAPSTTKKLPEDYVQRVKQIHESGGYESRGYA 374

Query: 933  XNWKREEAEKNVLRTHTTAVSARMLYALAQKPFIPRRYFSIDRVFRNEAVDRTHLAEFHQ 1112
             +WKREEA KN+LRTHTTAVS+RMLY LAQKPF P++YFSIDRVFRNEAVDRTHLAEFHQ
Sbjct: 375  YDWKREEANKNLLRTHTTAVSSRMLYQLAQKPFSPKKYFSIDRVFRNEAVDRTHLAEFHQ 434

Query: 1113 IEGVVCDRGLTLGDLMGVLYEFFRKLGMSKLRFKSTYNPYTEPSMEIYSYHEGFKKWVEV 1292
            IEG+VCDRGLTL DL+GVL++FF +LGM+KL+FK  YNPYTEPSMEI+SYHEGFKKWVEV
Sbjct: 435  IEGLVCDRGLTLCDLIGVLHDFFSRLGMTKLKFKPAYNPYTEPSMEIFSYHEGFKKWVEV 494

Query: 1293 GNSGMFRPEMLLPMGFPEDVTAIAWGLSLERPTMILYGIDNIRDLFGPKVDLSLIKRNPI 1472
            GNSGMFRPEML PMG PEDV  IAWGLSLERPTMI+YGIDNIRDLFG KVDL LIK+N I
Sbjct: 495  GNSGMFRPEMLRPMGLPEDVQVIAWGLSLERPTMIMYGIDNIRDLFGHKVDLGLIKKNSI 554

Query: 1473 CRLGID 1490
            CRLGI+
Sbjct: 555  CRLGIE 560


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