BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000902
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331148.1| predicted protein [Populus trichocarpa] gi|2...   187   2e-45
ref|XP_002281437.1| PREDICTED: nudix hydrolase 20, chloroplastic...   185   5e-45
ref|XP_002515578.1| Nudix hydrolase 20, chloroplast precursor, p...   183   2e-44
ref|XP_003633132.1| PREDICTED: nudix hydrolase 20, chloroplastic...   181   9e-44
ref|XP_002281417.2| PREDICTED: nudix hydrolase 20, chloroplastic...   181   9e-44

>ref|XP_002331148.1| predicted protein [Populus trichocarpa] gi|222873231|gb|EEF10362.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  187 bits (474), Expect = 2e-45
 Identities = 99/157 (63%), Positives = 116/157 (73%), Gaps = 5/157 (3%)
 Frame = -1

Query: 457 SFTWEDVLKVCVPSTNNNDSLDLHGFFQRIQTCNR-ASEKKMDFFPFVIDSQVVGYIHKQ 281
           SFTW+DV++   P    NDS DL GFF++I+ CNR +SE K +F P VI+ Q+VGYIH  
Sbjct: 48  SFTWDDVVQASQPDYAPNDSSDLSGFFEKIKYCNRGSSEIKSEFIPLVIEDQIVGYIHNG 107

Query: 280 FFADNLREFKDVFVF-GEDSLFGSNVVTLNQLLETPDDRTEAVGYVVKCLGE---GLIPG 113
           FF + LR FKDVFVF   DS FG+N VTLN+ L TP++RT  VG V+KCL E    LIPG
Sbjct: 108 FFDNYLRRFKDVFVFVPSDSRFGTN-VTLNKTLSTPEERTRVVGNVIKCLAEEEKELIPG 166

Query: 112 IRNELYPVTSSYGMPVCFSVERAAAPYFGIKAYGVHM 2
           IRNELYPV  S+G P  FSVERAAAPYFGIKAYGVHM
Sbjct: 167 IRNELYPVAPSFGSPPYFSVERAAAPYFGIKAYGVHM 203


>ref|XP_002281437.1| PREDICTED: nudix hydrolase 20, chloroplastic [Vitis vinifera]
           gi|297738865|emb|CBI28110.3| unnamed protein product
           [Vitis vinifera]
          Length = 364

 Score =  185 bits (470), Expect = 5e-45
 Identities = 91/161 (56%), Positives = 118/161 (73%)
 Frame = -1

Query: 484 SPCLSQRTNSFTWEDVLKVCVPSTNNNDSLDLHGFFQRIQTCNRASEKKMDFFPFVIDSQ 305
           SP +S     FTW+DV+++     ++  S DL GFF++I+ CNR  EK+ DF PFVI+ Q
Sbjct: 46  SPSVS--ATCFTWDDVVRISDSQYSSRHSSDLQGFFEKIRVCNRGLEKQSDFLPFVIEDQ 103

Query: 304 VVGYIHKQFFADNLREFKDVFVFGEDSLFGSNVVTLNQLLETPDDRTEAVGYVVKCLGEG 125
            VGYIHK FF D+L+ F +VF+F +D+    + + L+ +L TP++RT AVG VVKCLGE 
Sbjct: 104 TVGYIHKGFFDDHLKRFSNVFIFTQDN----SHIMLHPVLRTPNERTRAVGDVVKCLGEE 159

Query: 124 LIPGIRNELYPVTSSYGMPVCFSVERAAAPYFGIKAYGVHM 2
           LIPGIR ELYPV SS+G PV F +ERAAAPYFGIK+YGVHM
Sbjct: 160 LIPGIRKELYPVASSFGAPVFFLLERAAAPYFGIKSYGVHM 200


>ref|XP_002515578.1| Nudix hydrolase 20, chloroplast precursor, putative [Ricinus
           communis] gi|223545522|gb|EEF47027.1| Nudix hydrolase
           20, chloroplast precursor, putative [Ricinus communis]
          Length = 329

 Score =  183 bits (465), Expect = 2e-44
 Identities = 93/154 (60%), Positives = 114/154 (74%), Gaps = 1/154 (0%)
 Frame = -1

Query: 460 NSFTWEDVLKVCVPSTNNNDSLDLHGFFQRIQTCNRASEKKMDFFPFVIDSQVVGYIHKQ 281
           +SFTW+DV +V  P    NDS DL GFF +IQ CNR SE + +F  F+I+ Q VGYIH  
Sbjct: 58  SSFTWDDVFRVSQPEYVPNDSSDLSGFFHKIQLCNRGSELQSEFISFLIEDQFVGYIHNN 117

Query: 280 FFADNLREFKDVFVFGEDSLFGSNVVTLNQLLETPDDRTEAVGYVVKCLGE-GLIPGIRN 104
           F  + LR FKDVFVF + +    + V+L++ L+T +DRT AVG V+KCLGE GLIPGIRN
Sbjct: 118 F-VEQLRRFKDVFVFLQSN---HSYVSLHERLQTAEDRTRAVGQVIKCLGEEGLIPGIRN 173

Query: 103 ELYPVTSSYGMPVCFSVERAAAPYFGIKAYGVHM 2
           ELYPV SS+G PV FS+ERAAAPYFGIK YG+HM
Sbjct: 174 ELYPVVSSFGSPVYFSLERAAAPYFGIKVYGIHM 207


>ref|XP_003633132.1| PREDICTED: nudix hydrolase 20, chloroplastic-like isoform 2 [Vitis
           vinifera]
          Length = 356

 Score =  181 bits (459), Expect = 9e-44
 Identities = 89/161 (55%), Positives = 116/161 (72%)
 Frame = -1

Query: 484 SPCLSQRTNSFTWEDVLKVCVPSTNNNDSLDLHGFFQRIQTCNRASEKKMDFFPFVIDSQ 305
           SP +S     FTW+DV+++     ++  S DL GFF++I+ CNR  EK+ DF PFVI+ Q
Sbjct: 46  SPSVS--ATCFTWDDVVRISDSQDSSRHSSDLQGFFEKIRVCNRGLEKQSDFLPFVIEDQ 103

Query: 304 VVGYIHKQFFADNLREFKDVFVFGEDSLFGSNVVTLNQLLETPDDRTEAVGYVVKCLGEG 125
            VGYIHK FF D+L+ F +VF+F +D+    + + L+ +L TP++RT AVG VVKCLGE 
Sbjct: 104 TVGYIHKGFFDDHLKRFSNVFIFTQDN----SHIMLHPVLRTPNERTRAVGDVVKCLGEE 159

Query: 124 LIPGIRNELYPVTSSYGMPVCFSVERAAAPYFGIKAYGVHM 2
           LIPGIR ELYPV S +G PV F +ERAAAPYFGIKAYG+ M
Sbjct: 160 LIPGIRKELYPVASLFGAPVFFLLERAAAPYFGIKAYGIQM 200


>ref|XP_002281417.2| PREDICTED: nudix hydrolase 20, chloroplastic-like isoform 1 [Vitis
           vinifera]
          Length = 364

 Score =  181 bits (459), Expect = 9e-44
 Identities = 89/161 (55%), Positives = 116/161 (72%)
 Frame = -1

Query: 484 SPCLSQRTNSFTWEDVLKVCVPSTNNNDSLDLHGFFQRIQTCNRASEKKMDFFPFVIDSQ 305
           SP +S     FTW+DV+++     ++  S DL GFF++I+ CNR  EK+ DF PFVI+ Q
Sbjct: 46  SPSVS--ATCFTWDDVVRISDSQDSSRHSSDLQGFFEKIRVCNRGLEKQSDFLPFVIEDQ 103

Query: 304 VVGYIHKQFFADNLREFKDVFVFGEDSLFGSNVVTLNQLLETPDDRTEAVGYVVKCLGEG 125
            VGYIHK FF D+L+ F +VF+F +D+    + + L+ +L TP++RT AVG VVKCLGE 
Sbjct: 104 TVGYIHKGFFDDHLKRFSNVFIFTQDN----SHIMLHPVLRTPNERTRAVGDVVKCLGEE 159

Query: 124 LIPGIRNELYPVTSSYGMPVCFSVERAAAPYFGIKAYGVHM 2
           LIPGIR ELYPV S +G PV F +ERAAAPYFGIKAYG+ M
Sbjct: 160 LIPGIRKELYPVASLFGAPVFFLLERAAAPYFGIKAYGIQM 200