BLASTX nr result
ID: Coptis24_contig00000899
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000899 (1338 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002311863.1| predicted protein [Populus trichocarpa] gi|1... 286 1e-74 ref|XP_002520213.1| conserved hypothetical protein [Ricinus comm... 282 1e-73 ref|XP_002283643.1| PREDICTED: uncharacterized protein LOC100267... 263 8e-68 ref|XP_002311792.1| predicted protein [Populus trichocarpa] gi|2... 253 8e-65 ref|XP_003613372.1| SAM domain family protein [Medicago truncatu... 250 5e-64 >ref|XP_002311863.1| predicted protein [Populus trichocarpa] gi|118487432|gb|ABK95544.1| unknown [Populus trichocarpa] gi|222851683|gb|EEE89230.1| predicted protein [Populus trichocarpa] Length = 330 Score = 286 bits (731), Expect = 1e-74 Identities = 179/342 (52%), Positives = 218/342 (63%), Gaps = 28/342 (8%) Frame = +2 Query: 56 SSKPQVTITLGRSGQVVKRKDNSSEYVPTSS--SGTKRSIRDRLGHNNNQPKSKRQRRDG 229 +SK +VTITLGRSGQVVKR S+ S +G+KRS+ DRLGH Q +KRQR D Sbjct: 4 TSKARVTITLGRSGQVVKRAATISDDYSNSQQGAGSKRSVMDRLGH---QLSNKRQRGDS 60 Query: 230 SKKSLTDDGVDGVRVNRNDLRHKLMRKNKSRKPWSSDDGHKQKNIDLREKLSRTNQPT-- 403 S SL +GV R++++DLR+KLM+KN R+ S DD QK +DLREKLSRT QP+ Sbjct: 61 SLTSLGSNGVKDGRIDKDDLRYKLMQKNVFRRAQSDDD---QKTMDLREKLSRTVQPSGH 117 Query: 404 ---LRTDTRQRMPEPEATDTRQGMREPKATGLLRRIPPTRSADDLVQMDSMRNSYSNWTL 574 D RQRMPEP TDT +L RIPPTRSADDL M S RNS+S+WTL Sbjct: 118 PLSTNLDARQRMPEP--TDT----------SILGRIPPTRSADDLHHMYSSRNSFSSWTL 165 Query: 575 GALRPGSPDRLVGTSRGLSPPRIMDN--RRPV-------RHISSITHDA-------SRPS 706 +R SPDR++ +SRGLSPPR +DN RRP+ R +S + D S S Sbjct: 166 DHIRRRSPDRVISSSRGLSPPRNVDNLQRRPLNRTYDDFRTVSYMNKDVLDTPRSVSSSS 225 Query: 707 TFMPTISVPLEAAKPVVRFPP-----PTAPGITQKISYMGEEPVTVSGLLHSLGLGKYAI 871 TFM ++P + P P P + G+ K SY EE TV GLLHSLGLGKYAI Sbjct: 226 TFMTKSAMPPPSTVPATSVAPRMSQLPPSSGLVHKSSYAAEEQQTVEGLLHSLGLGKYAI 285 Query: 872 IFQAEEVDMTALKQMGDHDLKELGIPMGPRKKILLSVAGRSK 997 +F+AEE+DM ALKQMG+ DLKELGIPMGPRKKILL++ RSK Sbjct: 286 LFKAEEIDMPALKQMGESDLKELGIPMGPRKKILLALLPRSK 327 >ref|XP_002520213.1| conserved hypothetical protein [Ricinus communis] gi|223540705|gb|EEF42268.1| conserved hypothetical protein [Ricinus communis] Length = 334 Score = 282 bits (722), Expect = 1e-73 Identities = 175/344 (50%), Positives = 217/344 (63%), Gaps = 29/344 (8%) Frame = +2 Query: 56 SSKPQVTITLGRSGQVVKRKDNSSEYVPTSSSGTKRSIRDRLGHNNN--------QPKSK 211 +SK +VTITLGR+GQVVKR S+ +G+KRS+RDRLG N + QP +K Sbjct: 4 ASKGRVTITLGRTGQVVKRAAVVSDV--QYGAGSKRSVRDRLGTNFDSSSSRGGAQPNNK 61 Query: 212 RQRRDGSKKSLTDDGVDGVRVNRNDLRHKLMRKNKSRKPWSSDDGHKQKNIDLREKLSRT 391 RQR + SL+ +GVD VR++++DLR KLM+KN SR+ S+ ++Q +DLREKLSRT Sbjct: 62 RQRGESYLTSLSSNGVDDVRIDKDDLRLKLMQKNASRRAPSN---YEQSTMDLREKLSRT 118 Query: 392 NQPTLRTDTRQRMPEPEATDTRQGMREPKATGLLRRIPPTRSADDLVQMDSMRNSYSNWT 571 P P DTRQ M PK +L RIP TRSADDL +MDS RNSYS WT Sbjct: 119 VHPP--------GPSLRIVDTRQHMPAPKEASILGRIPSTRSADDLPRMDSSRNSYSPWT 170 Query: 572 LGALRPGSPDRLVGTSRGLSPPR------------IMDNRRPVRHISSITHDASRP---- 703 L +R SPDR++G+SR LSPPR +D+ R V ++S D RP Sbjct: 171 LDHIRRRSPDRIIGSSRALSPPRNVEEIQRRPLSRTLDDARAVSYMSKDVLDGRRPVGSS 230 Query: 704 -STFMPTISVPLEAAKPVV----RFPPPTAPGITQKISYMGEEPVTVSGLLHSLGLGKYA 868 + FM +P + KP + PPP GI QK SY EEP TV LLHSLGLGKYA Sbjct: 231 TTAFMAKPVLPTVSTKPAAPILGQIPPPC--GILQKASYAVEEPQTVESLLHSLGLGKYA 288 Query: 869 IIFQAEEVDMTALKQMGDHDLKELGIPMGPRKKILLSVAGRSKR 1000 I+F+AEEVDMTALKQM + DLKELGIPMGPRKKILL++ R+KR Sbjct: 289 ILFKAEEVDMTALKQMRESDLKELGIPMGPRKKILLALLPRTKR 332 >ref|XP_002283643.1| PREDICTED: uncharacterized protein LOC100267308 [Vitis vinifera] gi|297733839|emb|CBI15086.3| unnamed protein product [Vitis vinifera] Length = 294 Score = 263 bits (672), Expect = 8e-68 Identities = 163/323 (50%), Positives = 201/323 (62%), Gaps = 9/323 (2%) Frame = +2 Query: 59 SKPQVTITLGRSGQVVKRKDN---SSEYVPTSSSGTKRSIRDRLGHN------NNQPKSK 211 S+PQVTITLGR+GQVVKR N S + S+G+KRS RD G N Q K+K Sbjct: 2 SRPQVTITLGRTGQVVKRAGNVPDGSRFDSLPSAGSKRSTRDGAGGNAESSLYETQSKTK 61 Query: 212 RQRRDGSKKSLTDDGVDGVRVNRNDLRHKLMRKNKSRKPWSSDDGHKQKNIDLREKLSRT 391 R R D S S D RV RNDLR KLM+KNK R+ +G + + L+ +L R Sbjct: 62 RHRGDRSVWSSND-----ARVGRNDLRFKLMQKNKFRRTRGDYEG--RNHTGLKRQLPRA 114 Query: 392 NQPTLRTDTRQRMPEPEATDTRQGMREPKATGLLRRIPPTRSADDLVQMDSMRNSYSNWT 571 P + T QRMPE K GLLRRIPPTRSADDL+Q++S R SYS WT Sbjct: 115 VYPPVNMYTLQRMPES------------KVNGLLRRIPPTRSADDLLQLNSSRKSYSTWT 162 Query: 572 LGALRPGSPDRLVGTSRGLSPPRIMDNRRPVRHISSITHDASRPSTFMPTISVPLEAAKP 751 LR SPDR++ SRG SPP +++++ V I D+SR + +M T K Sbjct: 163 HNGLRCRSPDRILSASRGFSPPGNINDQQQVLTFRPI--DSSRAAAYMAT--------KQ 212 Query: 752 VVRFPPPTAPGITQKISYMGEEPVTVSGLLHSLGLGKYAIIFQAEEVDMTALKQMGDHDL 931 V R PPP + I QK SY+G EP+TV+ LHSLGLGKY I+FQAEE+DMTALKQM D+DL Sbjct: 213 VSRLPPPNS--IAQKNSYLGVEPLTVASFLHSLGLGKYIILFQAEEIDMTALKQMRDNDL 270 Query: 932 KELGIPMGPRKKILLSVAGRSKR 1000 KELGIPMGPRKKILL+++ SK+ Sbjct: 271 KELGIPMGPRKKILLALSPHSKQ 293 >ref|XP_002311792.1| predicted protein [Populus trichocarpa] gi|222851612|gb|EEE89159.1| predicted protein [Populus trichocarpa] Length = 341 Score = 253 bits (646), Expect = 8e-65 Identities = 160/337 (47%), Positives = 202/337 (59%), Gaps = 38/337 (11%) Frame = +2 Query: 56 SSKPQVTITLGRSGQVVKRKDNSSEYVPTSS--SGTKRSIRDRLGHNN-------NQPKS 208 +SK +VTITLGR GQVVKR S+ S +G+KRS+ +RLG N+ NQ + Sbjct: 4 TSKARVTITLGRGGQVVKRAATVSDDYSNSQQGAGSKRSVMERLGSNSDILSLHGNQLSN 63 Query: 209 KRQRRDGSKKSLTDDGVDGVRVNRNDLRHKLMRKNKSRKPWSSDDGHKQKNIDLREKLSR 388 KRQR D S SL +GV+ R+ ++DLR+KLM+KN + S DD QK +DLREKLSR Sbjct: 64 KRQRGDNSLTSLGANGVEDARIGKDDLRYKLMQKNVFSRTQSDDD---QKTMDLREKLSR 120 Query: 389 TNQPTLRTDTRQRMPEPEATDTRQGMREPKATGLLRRIPPTRSADDLVQMDSMRNSYSNW 568 T R P D R + +PK T +L RIPPTRSAD L MDS RNS+S W Sbjct: 121 T--------VRSPGPLLSNLDARHCLPDPKDTSILGRIPPTRSADVLHHMDSSRNSFSPW 172 Query: 569 TLGALRPGSPDRLVGTSRGLSPPRIMDN--RRPVRHISSITHDASRPSTFM--------- 715 TL +R SPDR++ +S GLSPPR MDN RRP+ T+DA R +M Sbjct: 173 TLDHIRRRSPDRVMSSSGGLSPPRNMDNLQRRPLNR----TYDAVRTVPYMNKDVLDTPR 228 Query: 716 ------------------PTISVPLEAAKPVVRFPPPTAPGITQKISYMGEEPVTVSGLL 841 P+ +VP ++ P++ PP+ GI QK SY+ EE TV GLL Sbjct: 229 SVSSSTTFITKSAMLPLSPSPTVPAKSVVPLMGHLPPS--GIVQKSSYVAEEQQTVEGLL 286 Query: 842 HSLGLGKYAIIFQAEEVDMTALKQMGDHDLKELGIPM 952 HSLGLGKY ++F+AEE+DMTALKQMG+ DLKELGIPM Sbjct: 287 HSLGLGKYVVLFKAEEIDMTALKQMGERDLKELGIPM 323 >ref|XP_003613372.1| SAM domain family protein [Medicago truncatula] gi|355514707|gb|AES96330.1| SAM domain family protein [Medicago truncatula] Length = 336 Score = 250 bits (639), Expect = 5e-64 Identities = 160/351 (45%), Positives = 215/351 (61%), Gaps = 37/351 (10%) Frame = +2 Query: 56 SSKPQVTITLGRSGQVVKRKDNSSEYVPTSSS----GTKRSIRDRLG--------HNNNQ 199 SS+ ++TITLGRSGQVVKR D ++ VP SSS GTKRS+RDR+G H N Sbjct: 4 SSRGRITITLGRSGQVVKR-DVTAVDVPYSSSMSSAGTKRSVRDRIGYSGDSSMRHGNGV 62 Query: 200 PKSKRQRRDGSKKSLTDDGVDGVRVNRNDLRHKLMRKNKSRKPWSSDDGHKQKNIDLREK 379 +KRQR D S ++ DDG R+ ++DLR KLMRK+ SR+ S+D+ +N+DLREK Sbjct: 63 SGNKRQRGDASMRNGPDDG----RIGKDDLRLKLMRKSASRRDESNDNN---RNVDLREK 115 Query: 380 LSRT-NQPTLRTDTRQRMPEPEATDTRQGMREPKATGLLRRIPPTRSADDLVQMDSMRNS 556 L +T + PT +++Q MPEP REP L R +P RS+DD+++M+SMRNS Sbjct: 116 LKKTAHPPTNSFNSKQHMPEP---------REPS---LFRPVPSARSSDDIMRMESMRNS 163 Query: 557 YSNWTLGALRPGSPDRLVGTSRGLSPPR------------IMDNRRPVRHISSITHDASR 700 YS WTL +R SP+ TSRG+SP R D RPV++ + SR Sbjct: 164 YSPWTLDQIRQRSPEEYPSTSRGISPQRNAGDPQRRPLNRTYDGVRPVQYAGRDVLETSR 223 Query: 701 PSTFMPTISVP---LEAAKPVVRFPPPTAPG-------ITQKISYMGEE--PVTVSGLLH 844 P + P+ +P + PV P P+ PG + Q+ ++G E P TV GLL Sbjct: 224 PPSAAPSSFMPRSTMSTLPPVTAKPVPSHPGRLPPSGSVPQRPPFVGNEQQPQTVDGLLQ 283 Query: 845 SLGLGKYAIIFQAEEVDMTALKQMGDHDLKELGIPMGPRKKILLSVAGRSK 997 +LGL KY I+F+AEEVDMTAL+QMG++DLKELGIPMGPRKK+LL++ R + Sbjct: 284 ALGLQKYQILFKAEEVDMTALRQMGENDLKELGIPMGPRKKLLLALLPRKR 334