BLASTX nr result

ID: Coptis24_contig00000898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000898
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535309.1| PREDICTED: uncharacterized protein LOC100790...    64   3e-08
ref|XP_003591256.1| hypothetical protein MTR_1g084990 [Medicago ...    61   3e-07
ref|XP_003555170.1| PREDICTED: uncharacterized protein LOC100776...    60   3e-07
ref|XP_002512588.1| GRIP and coiled-coil domain-containing prote...    59   1e-06
ref|XP_004135572.1| PREDICTED: uncharacterized protein LOC101216...    57   4e-06

>ref|XP_003535309.1| PREDICTED: uncharacterized protein LOC100790707 [Glycine max]
          Length = 930

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = -1

Query: 722  NNILSKVKHTIVKVKKAITGKSPSSKTITSDAKGDIQVK 606
            NNI+SKVK ++VK KKAITGKSPSSK ++SDAKGDI+VK
Sbjct: 892  NNIISKVKQSLVKAKKAITGKSPSSKNLSSDAKGDIKVK 930


>ref|XP_003591256.1| hypothetical protein MTR_1g084990 [Medicago truncatula]
            gi|355480304|gb|AES61507.1| hypothetical protein
            MTR_1g084990 [Medicago truncatula]
          Length = 1132

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = -1

Query: 722  NNILSKVKHTIVKVKKAITGKSPSSKTITSDAKGDIQVK 606
            NNI++KVK ++VK KKAITGKSPSSK ++SD KGDI+VK
Sbjct: 1094 NNIIAKVKQSLVKAKKAITGKSPSSKNLSSDPKGDIKVK 1132


>ref|XP_003555170.1| PREDICTED: uncharacterized protein LOC100776005 [Glycine max]
          Length = 752

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = -1

Query: 722 NNILSKVKHTIVKVKKAITGKSPSSKTITSDAKGDIQVK 606
           NNI+SKVK ++VK KKAITGKSPSSK ++S+ KGDI+VK
Sbjct: 714 NNIISKVKQSLVKAKKAITGKSPSSKNLSSEPKGDIKVK 752


>ref|XP_002512588.1| GRIP and coiled-coil domain-containing protein, putative [Ricinus
           communis] gi|223548549|gb|EEF50040.1| GRIP and
           coiled-coil domain-containing protein, putative [Ricinus
           communis]
          Length = 799

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/39 (71%), Positives = 33/39 (84%)
 Frame = -1

Query: 722 NNILSKVKHTIVKVKKAITGKSPSSKTITSDAKGDIQVK 606
           NNIL+KVK ++VK KKAI GKSPSSKT+ SD K DI+VK
Sbjct: 761 NNILTKVKQSLVKAKKAIIGKSPSSKTLASDTKDDIKVK 799


>ref|XP_004135572.1| PREDICTED: uncharacterized protein LOC101216708 [Cucumis sativus]
          Length = 1343

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 27/39 (69%), Positives = 35/39 (89%)
 Frame = -1

Query: 722  NNILSKVKHTIVKVKKAITGKSPSSKTITSDAKGDIQVK 606
            +NILSKVK ++VK KKAI GKSPSSKT++S+A+ DI+VK
Sbjct: 1305 HNILSKVKQSLVKAKKAIIGKSPSSKTLSSEARDDIKVK 1343


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